Lutra lutra (Eurasian river otter): 125086942
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Entry
125086942 CDS
T08100
Name
(RefSeq) ABC-type organic anion transporter ABCA8-like isoform X1
KO
K05650
ATP-binding cassette, subfamily A (ABC1), member 8
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125086942
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
llv02000
]
125086942
Transporters [BR:
llv02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
125086942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
SMC_N
AAA_29
AAA_15
MMR_HSR1
AAA_23
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
125086942
NCBI-ProteinID:
XP_047562604
LinkDB
All DBs
Position
16:11193804..11268159
Genome browser
AA seq
1624 aa
AA seq
DB search
MMKREISVCQQTWALLCKNLLKKWRLKRESFMEWLTPLLLLLCLSVYPTSHEFNDFSSLP
AMDLGRVDSFKDSTFSITYTPVTNTTQQIMNKVALASFMKDAKVLGLSEEENIKELMSDN
PDEVIQVIFTNTFSYHLKFLLGYRIPTKKEHRDHEAHCSKTTENVSCQVSQYWKTGFVAL
QAAINAAIIETATNHSVMEELMSITGKNMKIHPFISQGGIEADFFIFFCIISFSSFTYYA
SLNVTRERKKMKGLMRMMGLQDSAFWLSWGLLYGVFISIMALSLALIIKYVQFVILTGFT
VIFTLFFLYGLSLITLAFLMSVLVKKSFLTGLVVFLLTVFWGSLGFTALYRQLPTSLEWI
LSFLSPFAFTLGMAQLLRLDYDLNSNTFPNPSDYSNLIIATNFMLAFDLLFYMALTIYFE
KILPNEYGHGYPPFFFLKSSFWSRQQKAERVVLEDEIHSDPSSNDSFEPVSPELHGKEAI
RIRNVTKEYKGKPDKIEALKDLVLDIYEGQITAILGHSGAGKSTLLNILSGLSVPTKGSV
TIYNNKISEMSDLENIIKLTGICPQSNVQFDFLTVKENLRLFAKIKGIQSHEVDKEIQRV
LLELEMKNIQDVLAQNLSGGQKRKLSFATAILGDPQVFLLDEPTAGLDPFSRHNVWNLLK
ERKADRVILFSTQFMDEADILADRKVFLSKGKLKCAGSSLFLKKKWGIGYHLSLQLNEMH
VQENITSLIKQHIPDAKLSAESEGKLVYTLPLERTNRFPALYNDLDRCPDLGIENYGVSM
TTLNEVFLKLEGKSAIDESDMATLGEAQAERTGDTERLVEMEQVLSSLNETTKTIGGLVL
WKQQICMIARVRFLNLKHERKALLSLLLILGVGICPLLLRTIHNRIYEMSYTWDLSPHLY
FLAPGQQPCDPLTQLLIINKTGASIDDFIHSVEHQNIALEVDVSGTKTGLDDPSYNGAII
VSGNTKNYSFSLACNTKRLNCFPVLMDIISNALLGMIIPSAHIQTDRSTFIMDRESSSAY
EFQLYTIFWLILISSCSPYIAMSSIDDYKSKVQSQLWISGLFPSAYWCGQALVDVPMYSL
IFLLMYLMDYGLNFDGTLFTLISEIIQILCSFGYAASLIFLTYVISFIFRKGKRNSGIWS
FCFFMICSISVFILLLDSYEHVTLYCITFLVPQATLIGCMLLYYQVAIFYFSTEEELESI
EAFLIVLIPFLHFIIFLFILRCLEWKFGKKSMKKDPFFRISPRSPDVCQNPEVPEGEDED
VQMERMRTADALNSTNFEEKPVIIASCLRKEYAGKRKCCLSKRKKKIAARNVSFCVRKGE
VLGLLGHNGAGKSTSIKMITTDMKPSAGQVLLKGSNGEGSPGFLGYCPQENVLWPNLTVK
EHLEVFAAVKGLRKVDAAVTIARLADALKLQDQLKQPVKALSEGIKRKLCFALSILGNPL
AVLLDEPSTGMDPEGQQQMWQAIRATVKDTERGALLTTHYMAEAEAVCDRVAIMVSGKLR
CIGSIQHLKSKFGKNYLLEMKVKTLEQRESLHQEILRVFPRAARQERYSSVMVYKLPVED
VQPLAQAFFTLEKVKQSFDLEEYSLSQSTLEQVFLELSKEQELDDFDEELDPSVKWKLLP
QEDP
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagagagagataagtgtgtgtcaacagacttgggcattattatgcaagaacctt
ctgaaaaaatggagactgaaaagagagtcctttatggaatggttgaccccattgctcctc
ctactttgcttgtctgtatatcctactagtcatgaatttaatgatttttcttcactgcct
gccatggacctgggacgggtagactcatttaaagattctacattttctattacatacaca
cctgtcaccaatacaacccaacagataatgaataaagtagccttagcttccttcatgaaa
gacgcaaaagttttggggctgtccgaagaagaaaatattaaagaattaatgtcagataat
cctgatgaagttatacaagtcatctttactaatacattctcatatcatttgaaattcttg
ctaggatacagaattccaacaaagaaggaacacagggaccatgaagctcattgttctaaa
acaactgaaaatgttagctgccaagtttcacaatactggaagacaggttttgtggctctt
caagctgctatcaatgcagctatcatagaaactgcaacaaatcattcagtgatggaggaa
ttgatgtccattactggaaaaaatatgaagatacatcccttcatcagtcaggggggcatt
gaagctgatttcttcattttcttctgcattatttccttttcctctttcacttattatgca
tctcttaatgttacaagagagaggaaaaagatgaagggcttgatgaggatgatgggtctt
caggattcagcattctggctctcctggggtctgctctatggtgttttcatctccattatg
gcactttccttggcactcattataaaatatgtccagtttgtcattctgactggcttcacg
gtgatcttcaccctcttcttcctctatggattgtctttgataacattggcttttctaatg
agcgtcttggtaaagaaatctttcctcactggtctggtcgtgttccttctcacggtcttt
tggggaagtttgggatttacagcattgtacaggcaacttcctacatccttggagtggatt
ttaagctttcttagcccctttgccttcacacttggaatggcccagcttttgcgcttggac
tacgatttgaattctaacacatttcctaatccatcggactattcaaatctgataatagca
acaaatttcatgttggcttttgatcttctcttctatatggcacttacgatttatttcgag
aaaattttgccaaatgaatatggacatgggtatccccccttctttttcctgaagtcttcc
ttttggtcacggcaacaaaaagctgagcgtgtggttcttgaagatgaaattcactctgat
ccttcatctaatgactcctttgaaccagtgtctccagaattgcatggaaaagaagctatc
agaatcagaaatgttacaaaagaatataaaggaaagcctgataaaatagaagctttgaaa
gatttggtacttgacatatatgaaggccaaatcactgcaatacttggtcacagtggagct
ggaaaatcaacactgttaaatattcttagtgggctatctgttcccaccaaaggttcagtc
accatttataacaataaaatttcagaaatgagtgacctagagaatatcatcaagcttacc
ggaatttgtccacagtccaatgtgcagtttgacttcctcactgtgaaggaaaatctcagg
ctctttgctaaaataaaaggcattcagtcacatgaagtcgacaaagagatacaaagagtc
ttgctggaattggagatgaaaaatattcaagatgtcctggctcaaaacttaagtggtggg
cagaaaagaaaactcagctttgcaactgccattttaggagatcctcaggttttcctattg
gatgaaccaactgctggattggatcccttttcaaggcacaatgtttggaatctcctgaag
gagcggaaagcagaccgtgtgatcctcttcagtacccagttcatggatgaggctgacatc
ctggctgataggaaagtgtttctctccaaagggaagctgaagtgtgcaggttcttctctg
ttcctcaagaagaaatggggcattggatatcacttaagtttgcagttgaatgaaatgcat
gttcaggaaaatataacatcacttattaaacaacatatccctgatgccaaattatcagca
gaaagtgaaggaaaacttgtctacacattgcccttagaaagaacaaatagatttccagca
ctttacaacgatctggatagatgtcctgacctgggaattgagaattacggcgtttccatg
acaaccttgaatgaagtgttcctgaaactggaagggaaatcagctattgatgaatcggat
atggccacgttgggagaagcacaggcagaaagaactggagatacagagaggcttgttgag
atggaacaagttctcagttcactcaatgagacgacaaagaccatagggggcctggttctc
tggaaacagcaaatctgcatgattgcacgtgttcgcttcttgaacttaaagcatgaaagg
aaagctctcttatctctgctcttgattctaggagttggaatttgccctcttcttttgagg
actatccacaacagaatatatgaaatgagctacacttgggacctttctcctcatttatac
ttccttgctcctggacaacaaccatgcgatcctctcactcaattactgatcatcaataaa
acaggggcaagcattgatgattttatacattctgtggagcatcagaacatagctttggaa
gtggatgtatctggaaccaaaactggcctggatgacccatcatataatggagccatcatt
gtatctggtaatacaaagaattacagtttttcattagcatgtaataccaaaagactaaat
tgcttcccagttcttatggatatcattagtaatgcactacttggaatgattataccatca
gcacatatccaaactgacagaagtacctttataatggacagagagagtagtagtgcatac
gagttccaactatataccatattctggttgattttgatatcctcatgttctccttatatt
gccatgagcagcattgatgattataagagcaaagttcagtcccagctgtggatttcgggg
ctcttcccttctgcgtactggtgtgggcaggcgttggtggacgttccaatgtactccttg
atcttccttcttatgtatttgatggactacggcttaaacttcgacggcactctgttcaca
cttataagtgagattatacaaatcctgtgttcatttggctatgctgcctcccttatcttc
ttgacatatgtgatttcattcatttttcgcaaggggaaaagaaatagtggcatttggtct
ttttgcttctttatgatctgcagcatctctgtgtttatattgttgcttgacagctatgaa
catgtcaccctgtactgcatcacctttctggtaccacaagccacgttaattggctgtatg
ttgttatattatcaggtggccatattttatttctcgactgaagaagaattagaaagtata
gaggcatttctgatagtcttaattcctttccttcattttatcatcttcctttttattctt
cgatgtctggaatggaagtttggaaagaaatcaatgaagaaggatcccttctttcgaatt
tctccaagaagccccgatgtttgtcaaaatccagaagttccagaaggggaagatgaagat
gttcaaatggaaagaatgagaacagcagatgccttgaattccacaaactttgaggagaaa
ccagtcatcattgctagctgcctccgaaaagagtatgcagggaagaggaaatgctgcctt
tccaaaaggaagaagaaaatcgctgcaagaaatgtctctttctgtgttagaaaaggtgag
gttttaggattattagggcacaatggcgctggtaaaagcacatccattaagatgataact
acagacatgaaaccaagtgctggacaggtgctactaaaaggcagcaatggggagggctcc
ccaggcttcctggggtactgtccccaggagaacgtgctgtggcccaatctgaccgtgaag
gagcacctggaggtgtttgctgctgtcaaagggctgaggaaagtggatgcagcagtcacc
atcgccaggttggcagatgcactcaagctgcaggaccagctgaagcagcccgtgaaggct
ttatccgagggaataaagaggaagctctgcttcgcactaagcatcctgggaaacccgttg
gcggtgcttctggatgagccctccaccggcatggaccccgaggggcagcagcagatgtgg
caggcgatccgggccaccgttaaagacacagagaggggtgccctcctgacgacccactac
atggcagaggctgaggctgtgtgtgaccgcgtagccatcatggtttccgggaagctgaga
tgtattggttccatccaacacctgaagagtaaatttggcaagaattacctgctggagatg
aaggtgaagaccctggaacagagggagagcctccatcaggaaattctgagggtttttccc
cgggctgcaaggcaggaaaggtactcctctgtgatggtctataaactcccagtggaagac
gtgcaacctttagcacaagctttcttcacattagagaaggttaaacagagcttcgacctg
gaggaatacagcctctcccagtccaccctggagcaggttttcctggagctttcaaaggag
caggagctggacgactttgatgaagaacttgacccttcagtgaagtggaagcttctccca
caggaagacccttga
DBGET
integrated database retrieval system
