Lutra lutra (Eurasian river otter): 125086960
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Entry
125086960 CDS
T08100
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04080
Neuroactive ligand-receptor interaction
llv04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125086960
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
125086960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
llv04040
]
125086960
Ion channels [BR:
llv04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125086960
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ion_trans
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
125086960
NCBI-ProteinID:
XP_047562641
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Position
16:47819806..47871201
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AA seq
837 aa
AA seq
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MKKWGSSDSGQAEDPSQEDSCPDPLDGDPNSRSAPAKPHFFPTAKSRSRLFGKCDSEEAS
PMDCSYEEGQLASCPAITVNPVVIIQKHEDGPACARQPSHDSVTAGSEKSLKLYDRRKIF
EAVAQNNCEELQSLLLFLQRSKKHLMDSEFKDPETGKTCLLKAMLNLHEGQNDTIPLLLE
IARQTDSLKEFVNASYTDSYYKGQTALHIAIERRNMALVTLLVENGADVQAAANGDFFKK
TKGRPGFYFGELPLSLAACTNQLGIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNT
ADNTKFVTSMYNEILILGAKLHPTLKLEELTNKKGLTPLALAARSGKIGVLAYILQREIQ
EPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLVEPL
NRLLQDKWDRFVKRIFYFNFFVYCVYMIIFTTAAYYRPVDGLPPYKLKHTIGDYFRVTGE
ILSVSGGVYFFFRGIQYFLQRRPSLKTLFVDSYSEMLFFMQSLFMLGTVVLYFCHHKEYV
ASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTL
IEDGKNNSVPAESTLHRWRGPGCRPPDSSYNSLYSTCLELFKFTIGMGDLEFTENYDFKA
VFIILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMR
KAFRSGKLLQVGYTPDGKDDYRWCFRVDEVNWTTWNTNVGIINEDPGNCEGIKRTLSFSL
RSGRVSGRNWKNFALVPLLRDASTRERPPAQPEEVHLRHFAGSLKPEDAEVFKDPVA
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatgggggagctcagattcagggcaggctgaggacccatcccaagaggactcc
tgcccagaccccctggatggagaccctaattccaggtcagctccagccaagccccacttc
ttccccacggctaagagtcgcagccggctttttgggaagtgtgactcagaggaggcttct
cctatggattgctcttatgaagaaggccagctagcctcttgcccagccatcacagtcaac
cctgttgtcatcatccagaagcacgaggatggccccgcatgtgccaggcagccgtcccat
gattctgtcactgccggatctgagaagagcctcaagctctacgatcgcaggaagatcttt
gaagctgtggctcagaataactgtgaggagctgcagagcctgctgctcttcctgcagagg
agcaagaagcacctgatggacagcgagttcaaagacccagagactgggaagacctgtctg
ctgaaagccatgctcaacctgcacgaggggcagaatgacaccatccccctgctcttggag
attgcccggcagacggacagcctgaaggagtttgtcaatgccagctacacagacagctac
tacaagggccagacggccctgcacattgccatcgagaggcggaacatggcactagtgacc
ctcctggtggagaatggggcagacgtccaggctgcagccaacggggacttctttaagaaa
accaaagggcggcctggcttctactttggtgagctgcccctctctttggctgcatgcacc
aaccagctgggcatcgtgaagttcctgctgcagaactcttggcagccagcggacatcagc
gccagggactccgtgggcaacacagtgctgcatgcactagtagaggtggccgacaacaca
gcagacaacaccaagtttgtgacaagcatgtacaatgagattctgatcctgggggccaag
ctccacccgacgctgaagctggaggagctcaccaacaagaaggggctgacaccactggct
ctggctgccaggagtgggaaaattggggtcttggcctatattctccagagggagatccag
gagcccgagtgcaggcatctgtccaggaagttcacggaatgggcatatgggcctgtacac
tcctcgctctacgacctgtcctgcattgacacttgtgagaagaactcagtgctggaggtg
atcgcctacagcagcagcgagacccctaatcgccatgacatgcttttggtggaaccgctg
aaccgactcctgcaggacaaatgggacagatttgtcaagcgcatcttctacttcaacttc
ttcgtctactgcgtgtatatgatcatcttcaccacagcagcctactacaggcctgtggat
ggcttgcctccctataagctgaaacacaccattggggactatttccgagtcactggcgag
attctttctgtatcagggggagtctacttctttttccgagggattcaatatttcctgcag
aggcggccatcactgaagaccttgtttgtggacagctacagtgaaatgcttttttttatg
cagtctctgttcatgctggggaccgtggtactgtacttctgccaccacaaggagtacgtg
gcctccatggtgttctccctggccatgggctggaccaacatgctctactacacccgcggc
ttccagcagatgggcatctatgctgttatgattgagaagatgatcctgagagacctgtgt
cgcttcatgtttgtctaccttgttttcttgttcgggttttccacagcggtggtgacgctg
attgaggatgggaagaataactctgtgccagctgagtccacattgcacaggtggcgaggg
ccaggctgccggcctcctgacagctcctacaacagcctttactccacatgtctggagctt
ttcaagttcaccattggtatgggtgatctggagttcacagagaactatgacttcaaggct
gtcttcatcatcttgttgctggcctacgtgattctcacctatattcttctgctgaacatg
ctcattgccctcatgggtgagactgtcaacaagattgcgcaggagagcaagaacatctgg
aagctacagagagctatcaccatcctggacacggagaagagcttccttaaatgcatgagg
aaggccttccgctcaggcaagctgttgcaagtggggtacacacctgatggcaaggatgac
tacaggtggtgtttcagggtggatgaggtcaactggaccacctggaacaccaatgtaggt
atcatcaatgaagacccaggcaactgtgagggcatcaagcgcaccctgagcttctccctg
cggtcaggcagagtttcaggaagaaactggaagaactttgccctggttccccttttaaga
gatgcaagtacaagagaaaggcctcctgctcagccagaggaagttcatctgagacacttt
gcagggtccctcaagccagaagatgctgaggtcttcaaggatcctgttgcttga
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