Lutra lutra (Eurasian river otter): 125086994
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Entry
125086994 CDS
T08100
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125086994
03036 Chromosome and associated proteins [BR:
llv03036
]
125086994
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
125086994
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
125086994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Spt6_S1
HHH_3
S1
Tex_N
HHH_9
SH2
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
125086994
NCBI-ProteinID:
XP_047562741
LinkDB
All DBs
Position
16:42703597..42736920
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQSTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
DEGLLTIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQI
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggccgaggagtcggaggaagagtacaatgatgaaggc
gaagtggtgccccgagtcaccaagaaatttgtggaagaggaggatgacgatgaggaggag
gaggaggagaacctagatgatcaggatgagcaaggcaatctgaaaggctttatcaatgat
gatgacgatgaagatgaaggggaggaggatgagggtagtgactctggtgattcagaagat
gatgttggccacaagaagagaaaacgcacatcttttgatgaccgcctggaggatgatgat
tttgacctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaaataccgacgt
gtcaaaaaaatgtcagatgatgaggatgatgacgaggaggaatatggcaaagaagaacat
gaaaaagaggcaattgcggaggaaatcttccaggatggggaaggggaagaagggcaggaa
gccgtggaggcccccatggctcctccggaggaggaggaggaagatgatgaagaatcagac
attgatgacttcattgtggatgatgatggacagcctctgaaaaaacctaagtggcggaaa
aagcttcccggatacacagatgcggccctgcaggaagcccaggagatttttggtgtggac
tttgactatgatgagtttgagaaatataacgagtacgatgaagaactcgaggaagagtat
gagtacgaggatgatgaggctgagggtgagatccgcgtgcgccccaagaagaccaccaag
aaacgtgtgagccgcaggagcatcttcgagatgtacgagcctagcgaactagaaagcagc
cacctcacagatcaggacaatgaaatccgggccacagacctgcctgagaggttccagctc
cgctccatcccagttaagggggctgaagatgatgaactagaagaagaagctgactggata
tacaggaatgcctttgccacaccaaccatttctctgcaggaaagctgtgattacctagac
cgagggcagtcaaccagcagcttcagtcgaaaaggacccagcacaattcagaagattaaa
gaagccctaggcttcatgcgaaatcaacactttgaggtgccttttattgctttctaccgt
aaagaatatgtggagcctgagttgcacatcaatgacctatggagggtgtggcagtgggat
gaaaagtggacccaactgaggatccgcaaagagaacctaacacggctgtttgagaagatg
caggcttaccagtatgagcagatttccgctgaccctgacaaaccccttgctgatggcatc
cgggctctggataccaccgacatggagaggcttaaggatgtgcagtcaatggatgaactg
aaagatgtctacaaccatttcttgctttattatggccgtgatatccccaagatgcagaat
gccgccaaggccagccgcaagaagctgaagcgtgtacgggaagagggagatgaggaaggt
gagggtgaagaggcagaagatgaggagcagaggggcccagagctcaagcaggcctcccgg
cgagacatgtacaccatctgccagagtgctgggctagatggtctggccaaaaagttcggg
cttactcctgagcagttcggggaaaacctccgggacagctaccagcggcatgagacagag
cagttccctgcggagcctttggagctggccaaggattacgtttgcagccagttccctacg
ccagaagctgtgctggaaggtgcccgctacatggtagccctgcagattgcccgagagccc
ctcgtccgacaggtgctgaggcagaccttccaggagagagccaaactcaatataaccccc
accaagaaaggtagaaaggatgtggatgaggcccactacgcttattccttcaaatactta
aagaataagcctgtaaaggaactgagagatgaccagttcctcaagatatgcttggctgaa
gacgaggggctgctcaccattgacatcagcatagacatgaagggggtagaaggctacggc
aatgaccagacatatttcgaagagatcaaacagttttactaccgagatgagttcagccac
caggtgcaggagtggaaccggcagcgcaccatggccatcgaaagggctttgcagcagttc
ctctatgtacagatggccaaagagctcaagaacaagttgctggcagaagccaaagaatat
gtcataaaggcctgtagtcggaaactctacaactggttgagggtcgcaccctaccggcca
gatcagcaggtagaggaagatgatgactttatggatgagaaccaagggaaggggatccgc
gttctaggcatcgctttctcctctgccagagatcaccctgtgttctgcgccttggtcaac
ggcgaaggagaagtgacagacttccttcggctgccccattttaccaaacggcgaactgca
tggagagaggaagaacgggaaaagaaggctcaagatattgaaaccctaaagaaatttctt
ctgaacaaaaagcctcatgtggtgacagtcgcaggagaaaacagggacgcccagatgttg
attgaagatgtgaagcgcattgtgcatgaactggaccagggccaacagctgtcctctatt
ggggtggagctggttgataatgagttggccattctctatatgaacagcaagaaatcagag
gcagagttccgggattaccctccagtgctgagacaggctgtctccctggcccggcgcatc
caggaccctctgattgaatttgcccaggtgtgcagctctgatgaagacatcctgtgtctc
aagtttcatcccttacaggagcatgtggtgaaagaggagctgctcaacgccttgtactgt
gaatttatcaaccgagtcaatgaggttggggtcgatgtcaaccgtgccatcgcccaccca
tacagccaggccttaatccaatatgtctgtggcctgggacctcgaaaagggacacatctc
ctcaagatcctgaagcaaaacaacaccaggcttgagagccggacccagctggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgcgctggcttcctcaagatcgacacggcc
tccctgggggacagcactgactcatacattgaagttcttgatggttcccgagtccaccct
gagacatatgagtgggccaggaagatggcagtggacgctctggaatatgatgaatcagct
gaggacgccaaccctgcaggagccctcgaagagatcttggaaaacccagagcgactcaag
gacctggaccttgatgcctttgcagaagaactggagagacagggctatggtgacaaacac
atcaccttgtatgacatccgggcggagctgagctgccggtataaggacctccggacagcc
taccgctctcccaacacagaggaaatcttcaatatgttaaccaaagaaacaccagagacc
ttctacattggaaaactcatcatctgcaatgtcaccggcattgcccacaggcgtccccag
ggtgagagctatgaccaggcaatccgcaacgatgagacagggctctggcagtgtcccttc
tgtcagcaagacaatttccctgaactcagtgaggtctggaaccactttgacagcggttcg
tgccccggccaggccattggtgtcaaaacacggctagacaatggtgtcaccggcttcatc
cccaccaaattcctcagtgacaaagtggtaaagcggccagaggagcgagtgaaggtggga
atgactgttcactgccgcattatgaagattgacattgagaagttcagcgccgaccttacc
tgccgaacctcagacctcatggacaggaacaatgagtggaaactgcccaaagacacctac
tatgactttgacgcggaagcagcagaccacaaacaggaggaggacatgaaacggaagcag
cagcggaccacatacatcaagcgagtgatcgcacacccatctttccataatataaacttc
aagcaagcagaaaagatgatggagaccatggaccagggtgatgtgatcatccgcccgagt
agcaagggtgaaaatcacctgactgtgacctggaaggtcagtgacggcatctaccaacac
gtggacgtccgggaagaaggcaaggaaaatgccttcagcctgggagccaccctgtggatc
aatagtgaggaatttgaagacttggatgagattgttgctcgctatgtccagcccatggca
tcctttgcccgcgacctcctgaaccacaagtattatcaggactgcagtggtggtgaccgt
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcatcccttat
ttcatctgtgcctgcaaggaactgcccggcaagttcctcctgggataccagccccggggt
aaacccaggatagaatatgtaacagtgactcccgaaggattccggtaccgtggccaaatc
ttccctactgtgaatggacttttcagatggtttaaggatcactaccaggatcccgtaccg
ggcatcacccccagtagcagcagcaggacccggacgcctgcttccatcaatgccacccca
gccaacatcaaccttgcagatctgacgcgagctgtgaatgccttgccccagaacatgacc
tcccagatgttcagtgccattgcagccgtgacaggccaaggacagaaccctaatgccacc
ccagcccagtgggcctccagccaatatggctatggcggcagtggagggggcagcagcgct
taccatgtattcccaacgccagcccagcagccagtggccacaccactaatgacccccagc
tactcctacacaacccccagccagcccatcaccacaccacagtaccaccagctccaggcc
agcaccaccccacaatctgcccaggcccagccccagccttcttccagctctcggcaacgg
cagcagcagccaaagtccaacagccatgccgccatcgactgggggaagatggcagagcag
tggctacaggagaaggaagctgagaggcggaaacagaagcagcggctgacacctcgaccc
tctcccagccccatgatcgaaagcacccccatgtccattgccggcgatgccaccccgctc
ttggatgagatggatcggtag
DBGET
integrated database retrieval system
