Lutra lutra (Eurasian river otter): 125087007
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Entry
125087007 CDS
T08100
Name
(RefSeq) F-box/LRR-repeat protein 20 isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125087007
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125087007
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
F-box-like
LRR_6
LRR_At5g56370
F-box
LRR_8
LRR_EndoS
LRR_RPS2
LRR_At1g61320_AtMIF1
F-box_4
Motif
Other DBs
NCBI-GeneID:
125087007
NCBI-ProteinID:
XP_047562779
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Position
16:22585102..22690357
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AA seq
438 aa
AA seq
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MAPSRDRLLHFGFKATMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVL
ALDGSNWQRIDLFDFQRDIEGRVVENISKRCGGFLRKLSLRGCLGVGDNALRTFAQNCRN
IEVLNLNGCTKTTDATCTSLSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISW
CDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEG
LITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNC
HELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEV
IELDNCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTP
PPSVGGSRQRFCRCCIIL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggctccgagcagggaccgcctgctgcactttgggttcaaggcgacaatgttctcaaat
agtgatgaagctgtaatcaataaaaaacttcccaaagaactcctattgcggatattttct
tttctggatgttgttactttgtgtcgctgtgctcaggtctccagggcctggaatgttctg
gctctggatggcagtaattggcagcggattgacctgtttgatttccagagggatattgag
ggccgggtagtggagaatatttcaaaaagatgtgggggctttttacgaaagttaagtctt
cgtgggtgtcttggagtaggagacaatgcattaaggacttttgcacaaaattgtaggaac
attgaagtactgaatctaaatggatgtacaaagacaacagatgctacatgtactagcctt
agcaagttctgttccaaactcaggcaccttgacttggcttcctgtacatcaatcacaaac
atgtctcttaaagctctgagtgagggatgtccactgttggagcaattaaacatttcctgg
tgtgaccaagtaaccaaggatggcatccaagcactagtgagaggctgtgggggtctcaag
gccttattcttaaaaggctgcacacagctagaagatgaagctctgaagtacataggtgca
cactgtcctgaactggtaaccttgaacctgcagacttgcttacaaatcacagatgaaggt
ctcattactatatgcagagggtgccataagttacagtccctctgtgcctccggctgctcc
aacatcacagatgccatcctgaatgctctaggtcagaactgcccacggcttagaatatta
gaagtggcgaggtgttctcaattaacagatgtaggctttaccactctggccaggaattgc
catgagcttgaaaaaatggacctggaagagtgtgttcagataacagatagcacgttaatc
caactttctatacactgtcctcgacttcaagtattgagtctgtctcactgtgagctgatc
acagacgatggaattcgtcacctggggaatggggcctgcgcccatgaccagctggaggtg
attgaactggacaactgcccactgatcacagatgcttccctggagcacttgaagagttgt
cacagtctcgagcggatagaactctatgactgccagcagatcacacgggctgggatcaag
agactcaggacccatttgcccaatattaaagtccacgcctacttcgcacctgtcactcca
cccccatcagtagggggcagcagacagcgattctgcagatgctgcatcatcctatga
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