Lutra lutra (Eurasian river otter): 125087029
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Entry
125087029 CDS
T08100
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04082
Neuroactive ligand signaling
llv04721
Synaptic vesicle cycle
llv04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
125087029
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
125087029
04721 Synaptic vesicle cycle
125087029
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
llv02000
]
125087029
Transporters [BR:
llv02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
125087029
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GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
125087029
NCBI-ProteinID:
XP_047562827
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Position
16:complement(44078101..44109825)
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AA seq
630 aa
AA seq
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METTPLNSQKELPACKDKDDCQENGVLQKGVPVPEDKVESGHISNGYSAVPSPGAGDDTQ
HALPAATTALVAEAHQGERETWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCTNSWNTGNCTNYFSGNNVTWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLTLCIMGIFTVIYFSIWKGVKMSGKVVWVTATFPYIILLVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLGVVITCFFGSLAT
LTFGGAYVVKLLEEYATGPAVLTVVLIEAMAVYWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFVCIPTYIAYRLIVT
PGTFKERIIKGITPETATEIPYGDIHLNAI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacgcccttaaattcccagaaggagctgcccgcgtgtaaggataaagacgat
tgtcaggaaaatggagttctgcagaagggggtccctgtccctgaggataaggtggagtct
ggccacatctccaatgggtactcagcggtgccgagccctggtgccggagacgacactcag
catgcccttccagctgccaccaccgccctagtcgccgaggctcaccaaggggagcgggag
acctggggcaagaagatggatttcctcctctctgtcattggctatgcggtggacttgggc
aacgtctggcgctttccctacatctgctaccagaatggagggggggctttcctcctgccc
tacacgattatggccattttcggggggatcccactgttctacatggagcttgcgctgggc
cagtaccaccgaaacggatgcatttccatatggaggaaaatctgcccgattttcaaaggg
atcggctacgccatctgcatcatcgccttctacatcgcctcctactacaacaccatcatg
gcctgggcactctactacctcatctcctccttcaccgaccagctgccctggaccagctgc
accaactcctggaacaccggcaactgcaccaactatttctcggggaacaacgtcacctgg
acgctgcactcgacgtctcccgctgaagaattttacacgcgccatgtcctgcagatccat
cggtctaagggacttcaggacctggggggcatcagctggcagctcaccctctgcatcatg
ggcatcttcactgttatctacttcagcatctggaaaggtgtcaaaatgtctggcaaggtg
gtatgggtgacagccaccttcccttatatcattcttttggtcctgctggtaaggggggcc
accctccctggagcctggaggggtgttctcttctacttgaaacccaactggcagaaactg
ctggagacgggggtgtgggtggatgctgccgctcagatcttcttctctcttggtcctggc
tttggggtcctgttggctttcgctagctacaacaagttcaacaacaactgttaccaagac
gccctggtgaccagcgtggtgaactgcatgacgagctttgtttccggatttgtcatcttc
acggtgcttgggtatatggccgagatgcggaacgaggatgtgtccgaggtagccaaagat
gcaggccccagcctcctcttcatcacgtatgcagaagccatagccaacatgccagcatcc
actttctttgccatcatcttcttcctgatgttaatcacactgggcctggacagcaccttt
gcaggcttggagggggtgatcacagctgtgctcgacgagtttccgcacatctgggccaag
cgccgggagtggtttgtgcttggtgtcgtcattacgtgcttctttggctccctggccact
ctgactttcggaggggcctacgtggtgaagctgctggaggagtatgccacgggccccgcg
gtgctcaccgttgtcctcatagaggccatggctgtgtactggttttatggcatcactcag
ttctgcagtgacgtgaaggaaatgctcggcttcagccctgggtggttttggaggatctgc
tgggttgccatcagccctctctttctcctgttcatcatctgcagttttttgatgagcccg
ccccagctccgacttttccagtataactaccctcagtggagtatcatcctgggttactgc
atagggacctcgtctttcgtctgcatccccacatacatagcgtaccggctgatcgtcact
ccagggacatttaaagagcgtatcattaaaggtatcactccagaaacagcgacagaaatt
ccctatggggacatccacttgaatgccatataa
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