Lutra lutra (Eurasian river otter): 125087193
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Entry
125087193 CDS
T08100
Name
(RefSeq) TATA-binding protein-associated factor 2N isoform X1
KO
K14651
transcription initiation factor TFIID subunit 15
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03022
Basal transcription factors
llv05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125087193
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
125087193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125087193
03019 Messenger RNA biogenesis [BR:
llv03019
]
125087193
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125087193
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125087193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
125087193
NCBI-ProteinID:
XP_047563199
LinkDB
All DBs
Position
16:complement(37729634..37759208)
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AA seq
570 aa
AA seq
DB search
MSDSGTYGQSGGEQQSYSSYGNQGNQAYGQAPQSYSGYGQTTDSSYGQNYGSYSGYGQSQ
SGYSQSYSGYENQKQSSYGQQPYNNQGQQNTESSGGQGGRAPSYDHSDYGQQDSYDHQSG
YDQHQGSYDDQSNYGQQHDSYNQNQQSYHSQRENYSHHTQDDRRDVSRYGEDNRGYGGSQ
GGGRGRGGYDKDGRGPMTGSSGGDRGGFKNFGGHRDYGPRPDADSESDNSDNNTIFVQGL
GEGVSTDQVGEFFKQIGIIKTNKKTGKPMINLYTDKDTGKPKGEATVSFDDPPSAKAAID
WFDGKEFHGNIIKVSFATRRPEFMRGGGSGGGRRGRGGYRGRGGFQGRGGDPKSGDWVCP
NPSCGNMNFARRNSCNQCNEPRPEDSRPSGGDFRGRGYGGERGYRGRGGRGGDRGGYGGD
RSGGGYGGDRSGGGGYGGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGG
DRGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGGGYGGDRSGGYGGDRS
GGGYGGDRGGYGGKMGGRNDYRNDQRNRPY
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattctggaacttacggtcagtctgggggtgagcagcaaagttattcttcctat
ggaaatcaagggaaccaagcttatggacaagcaccacaaagctattctggctatggacaa
actactgattcctcatacggacagaattatggcagctactctggctatggacaaagccaa
tcaggttattcacaatcctacagtggttatgagaatcaaaagcagagctcatatggccag
cagccttataataaccagggacagcaaaacacggaatcatcaggaggccaaggtggaaga
gcgccttcatatgaccactcagactatggtcaacaagattcgtatgaccatcagtcaggc
tatgatcaacatcaaggttcatatgatgatcagtcaaattatggtcagcagcatgattcc
tataatcaaaatcagcagtcctaccattcacaaagggagaattacagccaccacacacaa
gatgaccgtcgtgatgtgagtaggtatggagaagataatagaggatatggcgggtcacag
ggaggaggtagagggcgtgggggatatgacaaggatggaagaggtcctatgacaggatca
agtggtggtgaccgcggtggcttcaaaaattttggtggtcacagggattatggacccaga
ccagatgctgattcagaatctgataattcagataacaacacaatctttgttcaaggactt
ggggagggtgtgtctacagatcaagtgggggagttctttaaacaaataggaattatcaag
acaaataagaagacgggaaaaccaatgatcaatctgtatacagacaaggacacagggaag
ccaaaaggagaggcaacagtgtcatttgatgaccctccttcagctaaggcagccattgac
tggtttgatggaaaagaattccatggcaacatcattaaagtgtcctttgctaccagaaga
cctgaattcatgagaggaggtggaagtggaggcgggcgacgaggccgtggaggatataga
ggtcgtggaggctttcaggggagaggtggagaccccaaaagtggggactgggtttgccct
aatccatcgtgtggaaatatgaactttgctcgaaggaattcctgcaaccagtgtaatgag
cccagaccagaggactctcgtccctcgggaggagacttccggggaagaggctatggtgga
gagaggggctatagaggtcgtgggggcagaggcggagaccgaggcggctatggaggagac
aggagcggcggcggctacggaggagacagaagtggcggtggcggctacggaggagataga
agtgggggcggctatggtggagacagaagtgggggcggctatggtggggaccgaggaggt
ggttacggtggggaccgaggaggcggctatggaggagatcgaggcggcggttacggtgga
gaccgaggaggcggctatggtggagaccgaggaggaggttatggaggagaccgaggcggc
ggctatgggggagaccgaggaggtggctacggtggagaccgaggcggctatggaggagac
cgcggtggcggtgggggctacggtggagaccgaagtggcggctatggaggtgacaggagt
gggggcggctatggaggagaccgaggcggctatggaggcaaaatgggaggaagaaacgac
tacagaaatgatcagcgcaaccgaccatactga
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