Lutra lutra (Eurasian river otter): 125087209
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Entry
125087209 CDS
T08100
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03013
Nucleocytoplasmic transport
llv05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125087209
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125087209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125087209
03036 Chromosome and associated proteins [BR:
llv03036
]
125087209
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125087209
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125087209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
125087209
NCBI-ProteinID:
XP_047563242
LinkDB
All DBs
Position
16:complement(5847046..5887224)
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AA seq
682 aa
AA seq
DB search
MEELDGEPTVTLIPGVNSKKKQMCFDWGPGEMLVCETSFNKKEESETEPGCPFIYIIRKD
IDVYSQILRKLFNESHGIFVGLQRIEEELTGKSRKAQLVRVSKNYRSVIRACMEEMHQVA
IAAKDPASGRQFSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSL
LADVLGSENPSKHDSFWKLVTILVLQGRLDEARQMLSKEADASPSSAGMCRILGDLMRTM
PVLSPGNTQTLTELELKWQHWHEECERHLQDSTFAANPHLESLCKIMLGDEAALLEQKEL
LNNWYHFLVTRLLYSHPTVKPIDLHLYAQGSLHSSPPVPLSLCFHLGIEWVPNFPQSSLD
LFLGGESSPEPLDSILLAAFEFDVHQVIKECSIALSNWWFVAHLTDLLDHCKLLQSHNLY
FGSNMREFLLLEYASGLFAHHSLWQLGVDYFDYCPELGRVSLELHIERIPLSTEQKALKV
LRICEQRQMTEQVRSICKILAMNAVRNNRLGSALSWSIRARDAAFATLVSDRFLKDYCER
GSFSDLDLIDNLGPAMMLSDRLTFLGKYREFHRFYGEKRLTDAASLLLSLMTSQIAPRSF
WVILLIDALPLLEEKEVVFSAEQTYELMRCLEDFASRRPVWREPGVQRIQEDVENTKLEM
LRLALARNLGRAIIKEGSLEGS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctcgacggcgagccgaccgtcactttgattccaggagtgaattcaaagaag
aagcaaatgtgttttgattggggtccaggggagatgctggtgtgtgaaacctccttcaac
aaaaaagaagaatcagagactgagccaggctgcccctttatctatatcatccgaaaggat
atagatgtttactctcagatcctgagaaaactcttcaacgaatcccatggaatctttgtg
ggcctccagagaattgaagaagaattgactggaaaatccagaaaagctcagttggtccga
gtgagtaagaactaccgatcagtcataagggcatgtatggaggaaatgcaccaggttgca
attgctgctaaagatccagccagtggtcgccagttcagcagccaggtctccattttgtca
gcaatggagctcatctggaacctttgtgagattctgtttattgaagtagctccagctggc
cctcttctccttcacctccttgactgggtccgactgcatgtgtgtgaagtggacagtttg
ttggcagatgtcctgggcagtgagaatccaagcaaacatgacagcttctggaagttggtg
accatcttggtgctacagggccggctggacgaggctcggcagatgctctccaaagaagct
gacgctagtccctcctctgcaggcatgtgccgaatcctaggggacctgatgaggacgatg
cctgttctcagtcctggtaacacccagacgctgacagagctggagctgaagtggcagcac
tggcacgaggaatgcgagcgtcacctccaggacagcacgtttgctgccaatccccacctg
gagtctctctgcaagatcatgctgggagatgaagccgctctgttggagcagaaggagctg
ctgaataactggtatcacttcctagtgacgcggctcctgtactctcatcccacagtgaaa
cccattgacctgcacctctatgcccagggttccctacacagcagccctcctgtccccttg
agtctctgcttccatctgggaattgagtgggtccccaactttccacagtccagccttgac
ctgtttttgggaggggagagcagcccggaacccctggacagcatcttgttggcggccttt
gagtttgatgtgcaccaggtgatcaaggagtgcagcatcgcactaagcaactggtggttt
gtggcccatctgacagacctgctggatcactgcaaactcctccagtcgcacaacctctac
tttggatctaacatgagagagttcctcctgctggaatatgcttcgggactgtttgctcat
cacagcctgtggcagctgggagtggattactttgactactgccctgagctcggccgcgtt
tccttggagctgcacattgaacgcatccccctgagcactgagcagaaagcccttaaggtg
ctgcggatatgtgagcagcggcagatgaccgagcaagttcgcagcatttgtaagatctta
gccatgaacgccgtccgcaacaaccgtctgggctctgccctgtcttggagcatccgagcc
agagacgctgcctttgccacgctggtgtcagacaggttcctcaaggattactgtgagcga
ggctccttttctgacctggatctcattgacaacctagggccagccatgatgctcagtgat
cgactgaccttcttgggaaagtaccgcgagttccaccgattttatggggagaagcgtctt
actgatgcggcttctcttctcctgtcactgatgacttcccagattgccccacggtctttc
tgggtaatactgctaatagatgccttgccccttttggaagagaaagaggtggttttttca
gcagagcaaacatacgagttgatgagatgtctagaggacttcgcctcaagaaggccagtg
tggagagagcctggtgttcagcgaatccaggaggacgtcgagaacaccaagttggaaatg
ctgagacttgctcttgcacgcaatctcggccgtgccattataaaggaaggctctttggaa
ggctcctga
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