Lutra lutra (Eurasian river otter): 125087211
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Entry
125087211 CDS
T08100
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04064
NF-kappa B signaling pathway
llv04622
RIG-I-like receptor signaling pathway
llv05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
125087211
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125087211
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125087211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125087211
Enzymes [BR:
llv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125087211
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125087211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-B_box
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-Tbcl_FmdE
zf-Nse
ANCHR-like_BBOX
EGF_integrin
Motif
Other DBs
NCBI-GeneID:
125087211
NCBI-ProteinID:
XP_047563246
LinkDB
All DBs
Position
16:complement(5990871..5996728)
Genome browser
AA seq
671 aa
AA seq
DB search
MERAGVGHVGLMGTLLTASEVRPGQGPCTRTPRGSFLSRHRAAKPLALSDMQKVSRPAQD
HNPALQPPAQPSRPPQTQLLMSNSSLSTFEDQVLCPICLEVFRNPVTTACGHNFCMTCLQ
GFWDHQATEGETLYCPQCRESFPSRPRLCKNVILEEMVTCFTQAKGHTLGSSRILAGPRD
VPCDFCAPQKLKSVKSCLQCMASLCEKHLRSHFEDQAFRDHSLLEPVWDLKSRLCRKHRQ
LRRLYCRTEGCCVCGACLLEEHKNHDTIPLEEERACKEVEVRKVQANVENQMLIINSDSQ
KHRGQVAFLSKLIQTTREEVNTCFSEIIQEVKNLQMKVLDFVEKEEAAALGKLGSSIQQS
HNRLLKLEGDSIWLRTLLANRSDQQFLQKGVDPGIPSTCHGVRFSGLPQEFPRLKHFPAC
MEPLMGTNCEEKQTFLQLPETLEELRTRLMDLGLSFINQLLLKGIKMNSYEVLPPAVDRK
TLLKCYCNLNFDPTTASEELFLFKETHSVLNLGILLEPFATSGPFPGFKQWPQVLCSRGL
SEGRHYWEADVSNSWVCLGLTYRRCPPLGSRPRRNIVYLLGRNPYSWCLEWDSLKFSVWH
NNTQTVLHGGYHRTLGVALDCGAGCLSFYCVAGGVSLLYRFLGSFLEPLYPAVMVSSGAS
VTLKQRPEAEV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggagagggctggggtagggcacgtgggactgatggggaccctcctgacagctagtgaa
gtgagaccagggcaaggcccctgcaccagaacgcccaggggttcttttctctcccgtcac
agggccgccaagcctctagccctctctgacatgcagaaggtttcacggccagcccaggac
cacaacccagccctgcagccccctgcccagccctcaagacctccccaaacccagctccta
atgagtaacagcagtctcagcaccttcgaggaccaagtcctctgtcccatttgcctggag
gtgttccgcaacccggtcaccaccgcctgcgggcacaacttctgcatgacctgcctccaa
ggcttctgggaccaccaggccaccgagggcgagacactctactgcccccagtgccgggag
agcttcccctccagaccgcgcctctgcaagaatgtcatcctggaggagatggtgacctgc
ttcacccaggccaagggccacaccttgggatcctctcggatcctggcggggccccgggac
gtgccctgcgacttctgtgctccgcagaagctcaagtcggtcaagtcctgtctgcagtgc
atggcctccctgtgcgaaaagcacctgcgcagccacttcgaagaccaggcgttccgggac
cactcgctgctggagcccgtgtgggacctcaagagccgcctgtgccgcaagcaccgccag
ctgcggcggctgtactgccgcaccgaaggctgctgcgtgtgcggggcctgcctgctggag
gagcacaaaaaccatgacaccatccccctggaggaggagcgcgcctgcaaggaggtggag
gttcggaaggtccaggccaatgtggaaaaccagatgctgatcatcaactctgacagccag
aagcacagggggcaggtggcctttctctcgaaactgatccagacaactcgtgaggaggtg
aacacctgcttctcagagatcatccaggaggtcaaaaatctgcagatgaaggtcttggat
tttgtggagaaagaggaggcagcggctctggggaagctgggcagctctatccagcagagc
cacaaccggctcctgaagctggagggggacagcatctggctccgcaccctgctcgccaac
aggagcgaccagcagtttctgcagaagggagtggaccctgggattccgagtacctgccac
ggtgtacgtttctctggactcccccaggagttccccaggctgaagcacttccctgcctgc
atggaacccctgatgggaaccaactgtgaggagaagcagaccttcctccagttgccagag
accctggaggagctccggacccggctgatggacctgggcctcagcttcatcaatcagctc
ctcctgaagggcattaagatgaactcctatgaggtgctgcccccagctgtggacaggaaa
acacttctcaagtgttactgcaacctgaactttgaccccaccacggccagcgaggagctg
ttcctgttcaaggagacccactcggtgctgaacctgggcatcctcctggagcccttcgcc
accagcggccccttccccggcttcaagcagtggccgcaggtgctgtgctcgcgcggcctg
tccgagggccgccactactgggaggccgacgtgtccaactcgtgggtgtgcctgggcctc
acctaccgccgctgccccccgctcggcagccgcccgcgccgcaacatcgtctacctgctg
ggccgcaacccctactcgtggtgcctggagtgggactcgctcaagttctccgtgtggcac
aacaacacgcagacggtgctgcacggcggctaccaccgcacgctcggcgtggcgctcgac
tgcggcgccggctgcctctccttctactgcgtggcgggcggcgtgagcctgctctaccgc
ttcctcggctccttcctggagccgctctaccccgcggtcatggtcagcagcggcgcctcg
gtgacgctcaagcagcgcccggaggcggaggtgtag
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