Lutra lutra (Eurasian river otter): 125087252
Help
Entry
125087252 CDS
T08100
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125087252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125087252
Enzymes [BR:
llv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125087252
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125087252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
FANCL_C
Motif
Other DBs
NCBI-GeneID:
125087252
NCBI-ProteinID:
XP_047563343
LinkDB
All DBs
Position
16:complement(32820346..32886330)
Genome browser
AA seq
781 aa
AA seq
DB search
MSGGHQLQLAALWPWLLMATLQAGFGRTGLVLAAAVESERSAEQKAIIRVIPLKMDPTGK
LNLTLEGVFAGVAEITPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPQRAPRPCL
SLASKARMAGERGASAVLFDITEDRAAAEQLQQPLGLTWPVVLIWGKDAEKLMEFVYKNR
KAHVRIELKEPPTWPDYDVWILLTVVGTIFVVILASVLRLRCRPRHSGPDPLQQRTAWAI
SQLATRRYRASCGRARAEWPDSSSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRVCVD
PWLHQHRTCPLCMFNIVEGDSFSQSLGPSRSYQEPGRRLHLIRQHPGHAHYHLPAAYVLG
PSRGAEARPPRPGPFLTSQEPGAAPRHHRVPRATHPRVLGEQQRLAVVQHPYAQGWGLSP
LRRTSQHPSVCPAPARRARPHDSSGSGESYRTERSGYMADGPASDSSSGPCHGSSSDSVV
NCTDVSLQGIHGSSSTFRSSLSSDFDPLVYCSPEGEPQGEETRPCRTSRPRSLDSVVPTG
ESQVSSHVHYHRHRHHHYKKRFQWHGRKPGPETGVPQARPAIAQTQPQPEPPSPDQQAAR
SNLTAPSGQLPSPQRPRTLPEATPGSADAASPSPSSLFHLQKSSLPVRHPQRKRRGGLSE
PTPASQPQDLMAHPACQNFPHYGTSLAYPWSPEAHPLIFGPPGLDRRLLPESPGPCYSSS
QPVWLCLTPRQSLGPHPPGEGPSEWSSGTPEGRPCPYPHCQLPPAQPGSEEETEELCEQA
V
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggccaccagctgcagctggctgccctctggccctggctgctgatggctacc
ctgcaggcaggctttggacgcacaggactggtactggcggcagcggtggaatcagaaaga
tcagcagagcagaaagctattatcagagtgatccccttgaaaatggaccccacaggaaaa
ctgaatctcactttggaaggcgtttttgctggtgttgctgaaataactccagcagaaggc
aaactaatgcagtcccaccccctgtacctgtgcaatgccagtgatgatgacaatctggag
cctggattcatcagcatcgtcaagctggagagtccccagcgggccccccgcccctgcctg
tccctggccagcaaggcccggatggcgggggagcgaggagccagcgctgtcctttttgat
atcacggaggatcgagctgctgctgagcagttgcagcagcccctggggctgacgtggcca
gtggtgttgatctggggtaaggacgccgagaagctgatggagtttgtgtacaaaaaccga
aaggcccatgttaggattgagctgaaggagcccccaacctggccagattatgacgtgtgg
atcctcctgacagtggtgggcaccatctttgtggtcatcctggcttccgtgcttcgcctc
cggtgccgcccccgccacagcgggccggatccccttcaacagcgaaccgcctgggccatc
agccagctggccaccaggaggtaccgggccagctgcgggagggctcgggctgagtggcca
gactcgagcagcagctgtagctcagcccccgtgtgtgccatctgcctggaggagttctct
gagggccaggagctacgggtcatttcttgcctccatgagttccatcgtgtgtgcgtggac
ccctggctccatcagcaccggacttgccctctctgcatgttcaacatcgtagagggagat
tcgttttctcagtccctgggaccttctcgctcttaccaggaaccaggccggagactgcac
ctcattcgccagcatcctggccatgcgcactaccacctgcctgctgcctacgtgctgggc
ccttcccggggtgcagaggctcggcccccacgacctggtcccttcctaacctcccaggag
ccaggcgcagccccccggcaccaccgcgtccccagagccacacaccccagggttctgggc
gagcagcagcgcctggcagtggtccagcacccctacgcgcagggctgggggctgagcccg
ctccgacgcacatcgcagcacccctcggtgtgcccagcacccgcacgccgggccaggcct
catgacagcagcggctctggagagagctaccgcacggagcgcagtggctacatggccgat
gggcctgccagtgactctagctcggggccctgccacggctcctctagtgactcagtggtc
aactgcacagacgtcagtctgcagggcattcacggcagcagctctaccttccgcagctcc
ctgagcagtgactttgaccccttggtgtactgcagcccggaaggggagccccagggagag
gagacacggccctgcaggacctcccggccccggtctttggactccgtggtgcccacaggg
gaaagccaggtttccagccacgtccactaccaccgccaccgacaccaccactacaaaaag
cgcttccagtggcatggccgaaagcctggcccagaaactggggtcccccaggccaggcct
gccattgctcagacacagccccagccagagccgccttcccctgatcagcaggctgccaga
tccaacctaactgccccttcagggcagctccccagcccacaacggcccaggaccctccca
gaggcaaccccaggctcagctgatgccgccagccccagtcccagtagcctcttccatttg
cagaaatccagccttcctgttcgacacccacagaggaaaaggcgggggggcctctcagag
cccacccctgcctctcagccccaggacttaatggcacacccagcttgccagaatttcccc
cattacggtaccagcttggcatacccttggtccccggaggcccacccgttgatctttggg
cctccgggcctggacaggaggctgctgccagaaagcccaggcccttgttactcaagttca
cagccagtgtggttgtgtctgactccacgccagtccctaggaccgcacccacctggagag
gggccttctgaatggagttctggcaccccagagggcaggccatgcccttaccctcactgc
cagctgccgccagcccagcctggctcggaggaggagactgaggagctgtgtgaacaggct
gtgtga
DBGET
integrated database retrieval system
