Lutra lutra (Eurasian river otter): 125087310
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Entry
125087310 CDS
T08100
Name
(RefSeq) ATP-binding cassette sub-family A member 6-like isoform X1
KO
K05649
ATP-binding cassette, subfamily A (ABC1), member 6
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125087310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
llv02000
]
125087310
Transporters [BR:
llv02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
125087310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
nSTAND1
DUF4162
AAA_15
AAA_22
CUB_M02D8_5_3rd
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
125087310
NCBI-ProteinID:
XP_047563456
LinkDB
All DBs
Position
16:10996778..11080620
Genome browser
AA seq
1621 aa
AA seq
DB search
MHMKQKSVYQQTQALLYKNFLQKWRMKRESLLEWALPILLGLYMGLFSHFRENMYFPELP
PQDLGRADHVNNSIAIVYTPVSDLTQEVMNKTAFALLKERKIVGVLNQKSMDKILLDNIT
DIAGIVFNDTFSYKLKFFQGYYIPFLKEDLFAAHCWNLDDDEHSCSLSKYWSSGFVALQA
AINAAIIQITTNHSVVEELMSITAVNMKTLPFMYKDVLQKELFLFYCLLYFFPFIYFVSL
NVTKERKKCKDFMKIMGLQESAFWLSYGLIYATFIFIISIMITVIITSTQIIVMTGFMVI
FTLFFLYGLSLIALTFLMSVLLKKTLLTNLVMFLLNIFCGGVGFTVYYRQLPSSLEWILS
FCSPFAFTAGMSKIIYLDNTMNGIIFPDPSGDSYVMIATFSVLAFDALFYLALALYFDKI
LPYGDERHYSPLFFLNSSCFRHQRTNNVIEKEIESEPPSEDCFEPVAPEFQGKEAIRIRN
VKKEYTSKSGKMEALKDLLFDIYEGQITAILGHSGAGKSSLLNILNGLSVPTEGSVTIYN
KNLSEMQDLEEIRKITGVCPQFNVQFDILTVKENLRLFAKIKGIQPQEVEQEVQRILLEL
NIQNIQDNLAKHLSEGQKRKLTFGIAILGDPQILLLDEPTAGLDPFSRHRVWSFLKEHKT
GRVILLSTNLMDEADILADRKVIMSNGRLKCAGSSVFLKRRWGLGYYLSLYRNEVCDPEK
ITSFIKHYIPDAKLKTENKEKLVYTLPMERTNKFPDLFSELDKCSGQGVTSYDISMSTLN
DVFMKLEGKSTIGQDFEQAEIRGTENPHEIEPACPSFPEMQKAASDMGLWKMQIRAIARL
RFLKLKRGKKDLLILLLVFGIAMFPLIVEKIIYALLIQKSDWEFKSELYFLSPGQPPEDP
RTSLLIINNTGSNIEDFIQSVKHQNILLEVDDFANRNGTDDLSYNGAIVVSGKQKDYRFS
VACNTLRLHCFPILVNIISNGLLRMFNCTQNIRIERSPYPFNFMIYWTGLPEGSMFLFWL
VCSISPYISMSSISDYKKRAKTQLWISGLYPSAYWCGQALVDISFFVFLLLLMYLIFYIA
NITEIYITSRIVFSLVVFGLGYATSLVFLTYVISFISRKWKKNSGLWSFCFYITSIIMFD
IMLLHFNLPTLISSMVFVPSTTMGGFLAFLAQRAYEHQPKYSDHKYDPSGVDLLVCLIPY
LQALLFVFILRCMETKCGKKIMREDPVFRISPQSRGARPNPEEPVDEDEDVKAERQRAAN
ALTTSQAGEKPVIIASCLHKEYAGQKKSCFSKRRKKIAARNISFCIKKGEILGLLGPNGA
GKSSSIRMISGITKPTAGEVELKGCGLVWDHQGDNTVSLPGYCPQENVLWPSLTVREHLE
IFAAIKGLRKGDATIAISRLVDTFKLHGQLDVQAQKLTAGAARKLCFVLSVLGNSPVLLL
DEPSTGMDPAGQQQMWQVIQAAIKNTEKGALLTTHYLAEAEAICDRIAIMVSGRLRCIGS
IQHLKDKLGKDYILELRVKEAAQVTCVHTEILKLFPQVAPQERYFSFLVYKLPLVDVYPL
SQTFRKLEAVKHNFNLEEYSLSQCTLEKVFLELSKEQELGNFEEEIDTTMRLELLSPSDD
F
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgcatatgaaacagaaaagtgtgtatcagcaaactcaagcacttctgtacaagaatttt
cttcagaaatggagaatgaaaagagagagtttattggaatgggcactcccaatacttcta
gggctatacatgggactattttcacatttcagagaaaatatgtatttccctgaattgcct
cctcaagatctgggaagggcagatcatgttaataactctatagctattgtatacacacct
gtctctgatctaacccaggaggtaatgaataaaacagcatttgcacttttgaaagaaaga
aagatcgttggagtactgaaccaaaaatccatggataaaatacttctagacaatatcaca
gacatcgcgggaattgtcttcaatgacactttctcttataagttaaaattttttcaggga
tattacattccatttttgaaggaagatctttttgcagctcattgctggaatctggatgat
gatgagcattcctgttctctgtccaaatactggagtagtggatttgtggctttacaagct
gcaattaatgctgctattatacagatcacaacaaatcactctgtggtggaagagttgatg
tcgattactgctgtaaatatgaagactctaccttttatgtataaagacgttcttcaaaag
gagctgtttcttttctactgcctgctttactttttcccgtttatatattttgtatcactc
aatgttacaaaagagagaaaaaagtgcaaggattttatgaaaataatgggtctgcaagaa
tcagccttctggctctcctacggcttaatctatgctaccttcatcttcattatttccata
atgattacagttattataacatctacccaaattatagtcatgacgggcttcatggtcata
tttacactctttttcttatatggcttatctttgattgctctaacgttcctgatgagcgtg
ttgttaaagaaaactctcctcaccaatttggttatgtttctcctcaatatcttttgtggg
ggtgtgggattcactgtgtattatagacaacttccttcctctctggagtggattttgagc
ttttgtagcccttttgccttcactgctggaatgagtaagattatctacttggataatact
atgaatggtataatttttcccgacccttcaggagactcatatgtaatgatcgcaactttt
tccgttttggcttttgatgcacttttctacttggcattggcattatactttgacaaaatc
ttaccctatggggatgagcgccattattctccattatttttcctgaactcatcttgtttc
cgacaccagaggactaataatgtcattgagaaagaaatagagtctgagcctccttctgag
gactgttttgaaccggtagctccagaattccaaggaaaagaagccatcagaatcagaaat
gttaaaaaagaatataccagcaagtctgggaaaatggaagcactgaaagacttgctcttt
gacatatatgaaggtcaaatcacagcaattctgggtcatagcggagctggcaaatcttca
ttgctaaacatccttaatgggttgtctgttccaacagaaggatcagttaccatctataat
aaaaatctctctgaaatgcaagacttggaggaaatcagaaagataactggtgtttgtcct
caattcaatgttcaatttgacatactcactgtgaaggaaaacctcaggctgtttgcgaaa
ataaaaggaattcagccacaggaggtggaacaagaggtacaaagaattttattagaattg
aacatacaaaacattcaggataaccttgctaaacatttaagtgaaggacagaaaagaaag
ctgacttttgggattgccattttaggagatcctcaaattttgctattagatgaaccaact
gctgggttggatcccttttcaaggcatcgagtgtggagtttcctcaaggaacacaaaaca
ggccgtgtaatcctcttgagtaccaatctcatggacgaagctgacatcctggctgataga
aaagtgatcatgtccaatgggagattgaagtgtgcagggtcttctgtctttttgaagaga
agatggggtcttggatattacttaagcttgtacagaaatgaagtatgtgatccagaaaaa
ataacatccttcattaaacattacatccctgatgctaaattaaaaacagaaaacaaagaa
aagcttgtatatactttgcccatggaaaggacaaataaatttccagaccttttcagtgag
cttgataagtgttctggccagggtgtgacgagttatgacatttccatgtcaactctgaat
gatgttttcatgaaactggaaggaaaatcaactattggacaagattttgaacaagcagag
ataagaggcacagaaaacccacacgaaatagagccagcttgcccttctttccctgaaatg
cagaaggctgcgagtgacatgggcctttggaaaatgcagatccgcgcaatagcacggctc
cgtttcttaaagttaaagcgtggaaagaaagaccttttgattctactcttggtatttggg
attgcaatgttccctttgattgtggaaaagataatttatgccctattaattcaaaagagt
gattgggaatttaaatctgaactgtatttcctctctcctggacaacctccagaagatccc
cgtaccagcctgttgatcatcaataacacaggatcaaatattgaagattttatacagtca
gtgaagcatcaaaacatacttctggaagtagatgattttgcaaacagaaacggcactgat
gacctgtcatacaatggagctatcgtagtttctggcaaacaaaaggattacagattttca
gttgcttgcaatactttgagactgcactgttttcctattcttgtgaatattattagcaat
gggttacttcgaatgtttaattgcacacaaaatattcgaattgagagaagcccatatcct
tttaactttatgatctactggactggactgccagaaggttctatgttcttgttttggctt
gtgtgcagcatttcaccttacatctccatgagcagtatcagcgattacaaaaagagagct
aagacccagctatggatttcaggcctctacccttctgcctactggtgtgggcaggcacta
gtggatatcagcttcttcgttttccttctccttttgatgtatttaattttttacatagcc
aacataacagagatttatatcacaagtcgaattgtgttcagtctggttgtatttgggctc
ggttatgcaacatcacttgtcttcttgacatatgtgatatcatttatttctcgcaagtgg
aaaaaaaatagtggcctttggtcattttgcttctatatcacctcaatcattatgtttgac
attatgctgcttcatttcaacttgcctaccttgatttctagcatggtatttgttccctca
actaccatgggtggatttctagcctttctggcacagagagcttatgagcaccaaccaaaa
tactcagaccacaaatatgacccgagtggagttgatcttctagtatgcctaataccttac
ttgcaggctttgttatttgtttttatcctaagatgcatggagacaaaatgtggaaagaaa
ataatgcgagaggatcccgttttcagaatttccccccaaagtagaggtgctcgacctaat
cctgaagaacctgtcgatgaggatgaagatgtcaaagcagaaaggcaaagagcagcaaat
gccctgaccacttcgcaggcaggcgagaaacctgtcataattgccagctgtctgcacaaa
gagtacgcaggtcagaagaaaagttgcttctcaaagaggaggaagaaaatagcagcaaga
aatatctccttctgcattaaaaaaggtgaaattttgggattgctaggacctaacggtgct
ggtaaaagctcatctattaggatgatttctgggatcacgaagccaacagctggagaggta
gaactgaaaggatgtggtttggtttgggatcatcagggggacaacacagtcagcttaccg
ggatactgtcctcaggagaacgtgctctggcccagcctgacagtgagggaacatctggag
atctttgccgccatcaaagggctgaggaaaggggacgccaccattgccatttcacgattg
gtggatactttcaaactacacggacagctagatgttcaggcgcagaaattaacagcagga
gccgccagaaagttgtgttttgtgctgagcgtcctgggaaattcgcctgtcctgctcctg
gatgaaccctcgacaggcatggacccagcagggcagcagcaaatgtggcaggtgatccag
gcagccattaaaaacacagagaaaggagcgctcctgaccacccattacctggccgaagct
gaggccatatgtgaccgcatcgctatcatggtgtctggaaggttgaggtgcatcggctcc
atccaacacctaaaagacaaactcggcaaggattacattctagaactgagagtgaaggaa
gctgcccaagtcacctgtgttcataccgagattctgaagcttttcccacaggttgcacca
caggaaaggtacttctccttcttggtctataaactacctctggtggatgtctaccctcta
tctcagaccttccgcaaattagaggcagtgaaacataactttaacctggaagagtacagc
ctctctcagtgcacactggaaaaggtattcttagagctttctaaggagcaggagctggga
aattttgaagaagaaattgatacaaccatgagattggaactcctctctccttcagatgac
ttttaa
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