Lutra lutra (Eurasian river otter): 125087342
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Entry
125087342 CDS
T08100
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03018
RNA degradation
llv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125087342
09123 Folding, sorting and degradation
03018 RNA degradation
125087342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125087342
03041 Spliceosome [BR:
llv03041
]
125087342
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125087342
mRNA degradation factors
5'-3' decay
Lsm complex
125087342
Spliceosome [BR:
llv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125087342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
125087342
NCBI-ProteinID:
XP_047563528
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All DBs
Position
16:46456369..46457382
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AA seq
137 aa
AA seq
DB search
MLSLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEGVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRCGI
PGRGQREKKPGRQAGKQ
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atgctttccttgtcgctgctgaagacggctcagaatcatcccatgttggtggaactaaaa
aatggggagacatacaacggccacctggtgagctgtgataactggatgaacattaacctt
cgagaggtgatctgcacatccagggacggggacaagttttggcggatgccagagtgctat
atccgcggcagcaccatcaagtacctgcgcatccccgacgagatcattgacatggtcaag
gagggggtggtggccaagggccgcggccgtggtggcctgcagcagcagaagcagcagaag
ggccgaggcatggggggcgctgggcgaggtgtgtttggtggccggggccgctgtgggatc
ccaggtagaggtcagcgggaaaagaagccaggcaggcaggcgggcaaacagtga
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integrated database retrieval system
