Lutra lutra (Eurasian river otter): 125087368
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Entry
125087368 CDS
T08100
Name
(RefSeq) cilia- and flagella-associated protein 52
KO
K24728
cilia- and flagella-associated protein 52
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
llv03037
]
125087368
Cilium and associated proteins [BR:
llv03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
125087368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
PQQ_2
WDR54
Beta-prop_VPS8
Beta-prop_NOL10_N
DUF7082
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
125087368
NCBI-ProteinID:
XP_047563569
LinkDB
All DBs
Position
16:complement(57354887..57394956)
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AA seq
620 aa
AA seq
DB search
MENQTSLKAEVAELELEAVIGFNGHVPTGLKCHPDQEHLIYPLGCTILIQAINTQEQNFL
HGHSNNVSCVTISKSGVYIASGQVTFMGFKADIILWDYKKRELIARLSLHKGKIEALAFS
PNDLYLVSLGGPDDGSVVVWSIAKREAICGSPAAGLNVGNATTVLFSKCRDEMFVTAGNG
TIRVWELDLPNRKIWPTECQTGQMKRIVMSITMAADDSFFYLGTTTGDILKMNPRTKLLA
DTGPAKDKFSLGVSAIKCLKMGGLLVGSRAGLLVFCRSPSYKPIKKIQLQGGITSITPRG
EGHQFFVGTEESHIYRVNFTDFKETLIATCHSEAVQDIVFPFGTAELFATCAKKDIRVWH
TLSNRELLRITVPNMTCHSIDFMRDGKSIISAWDDGRIRAFAPETGRLIYVINNAHRIGV
TAIATTSDCKRVISGGGEGEVRVWQISCQTQKLEEALKEHKSSVSCIRVKNNNEECVTAS
TDGTCIIWDLVRLRRNQMILANTLFQCVCYHPEEFQIITSGTDRKIAYWEVFDGSVIREL
EGSLSGSVNGMDITQEGVHFVTGGNDHLVKVWDYNEGEVTHVGVGHSGNITSIRISPGNQ
YIISVSADGAILRWKCPFSS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccaaacttcgctcaaagccgaggtggccgagctggagcttgaggccgtgatt
ggcttcaacggacacgtgcccacaggcctgaaatgccatcctgaccaagagcatctcatt
taccctctgggctgcacgatcctgattcaggcgattaacacccaggaacagaatttcctg
cacggtcatagcaacaacgtctcctgtgtgaccatctccaagagcggagtttacatagcc
tctggacaggtcacgttcatgggcttcaaggcagatatcattctgtgggattataagaaa
agggagctgattgcccggctgtcacttcacaagggcaaaattgaagcgctggccttttca
ccaaatgatttgtacttggtgtccctcggaggcccagatgacggaagtgtggtcgtgtgg
agcatagcgaagagagaagccatctgcggcagtcccgcggccggcctcaatgtgggcaat
gccaccacggtgctcttctcgaagtgccgggatgagatgtttgtcacggctgggaatggg
acaatccgagtttgggaactggatctcccgaatagaaaaatctggccaactgagtgccaa
acgggtcagatgaaaagaatagtcatgagtatcacaatggccgccgacgacagctttttc
taccttggcaccacaactggagacattctgaaaatgaacccgaggaccaaactgctggca
gacactgggcctgcgaaggacaagttcagtctgggagtgtccgccatcaagtgcctgaag
atggggggtctgttggtgggttccagagccggattgctggttttctgtagaagccccagc
tacaaacccatcaagaaaatccagttacaaggtggcatcacgtcaatcacacctcgaggg
gaaggacaccagttttttgtgggaacagaagaatcacacatttaccgcgtcaacttcacg
gatttcaaagagactctcatcgcaacctgtcactccgaagctgtccaggacattgtcttt
ccattcggcaccgccgagctgtttgccacctgtgccaagaaggacatcagggtatggcac
acactgtccaaccgggagctgctgcgcatcaccgtgcccaacatgacctgccacagcatc
gatttcatgcgggacggcaagagcatcatctcggcgtgggacgacggtcgaatccgagcc
tttgccccagagacaggccggctgatatacgtcattaacaacgcccacaggatcggagtg
acagccatcgctaccaccagtgactgtaaacgggtcatcagcggcggcggggaaggggag
gtgagggtctggcagatcagctgtcagacccagaagctggaggaggccctgaaggagcac
aaatcctccgtgtcctgcatccgggtgaagaacaacaacgaggaatgtgtcacggccagc
acggacgggacttgcatcatctgggacctcgtacgtctccggaggaatcagatgatcctg
gctaataccttattccagtgtgtttgttaccatcctgaagagttccagatcatcaccagc
gggaccgacaggaagattgcttactgggaagtctttgatgggtcggtcatcagagagttg
gaaggttccttgtctgggtcggtcaatggaatggatatcacccaggaaggagtgcacttc
gtcacgggtggaaatgaccatctggtcaaagtgtgggattataatgagggtgaagtgact
cacgtcggggtgggacacagcggcaacatcaccagcatccggataagtccaggaaatcag
tacatcattagcgtgagtgctgacggagcaattttgagatggaagtgcccgttttcctcc
tga
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