Lutra lutra (Eurasian river otter): 125087393
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Entry
125087393 CDS
T08100
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
125087393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125087393
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
125087393
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR3_1st
ANAPC4_WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
DSE1_N
Beta-prop_HPS5
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ASA1
Motif
Other DBs
NCBI-GeneID:
125087393
NCBI-ProteinID:
XP_047563626
LinkDB
All DBs
Position
1:223030549..223043451
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AA seq
829 aa
AA seq
DB search
MDLAYVCEWERWPKSTHCPSVPLACAWSCRNLIAFTTDLRNDDQDLTRVIHILDTEHPWD
VHSVSSEHSEAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESHVGSLVEGDPIV
ALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSL
LKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQFYKVCVSVVSEK
CRIDTEILPSLFMRCTTDLNRKDKFPAITHLKFLARDMSEQVLLCASSQTSSIVECWSLR
KEGLPVNNVFQQISPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVAS
DTQFYPGLGLALAFHDGSVHIVHRLSLQSMAVFYSSAAPRSADEPAIKRPRASGPAVHFK
AMQLSWTSLALVGIDNHGKLSMLRISPSMGHTLDVSLALRHLLFLLEYCMVTGYDWWDTL
LHVQPAMVQSLVEKLHEEYTRQNAALQQVLSTRILAMKASLCKLSPCTVARVCDYHAKLF
LVAVSSTLKSLLRPHFLNTPDKSPGDRLTEVCSKITDADIDKVMINLKTEEFVLDMNTLQ
ALQQLLQWVGDFVLYLLASLPNQGSPLRPGHSFLRDGPSLGLLRELMVVIRIWGLLKPGC
LPVYTATSDTQDSMSLLFRLLTKLWICCRDEGPTSEPDEALVDECCLLPSQLLIPSLDWL
PVSDGLVSRLQPKQPLRLHFGKAPPLPAGAGSLPLDGLVRAPGQPKVDHLRRLHLGAFPT
EECKTCTRCGCVTMLRSPNKTTAVKQWEQRWIKNCLCGGLWRRVPLSCP
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggatctggcttacgtctgcgagtgggagagatggcccaagagtacccactgcccgtca
gtgcccctggcctgtgcctggtcctgccgtaacctcattgccttcaccactgaccttcga
aatgatgaccaagacctcacccgcgtgatccatatcctggatacggagcacccctgggac
gtgcactctgtcagctcggagcacagcgaggccatcacctgccttgagtgggaccagtca
ggctcccggctcctgtcggccgatgccgatgggcagatcaagtgctggagcatggcggac
cacctggccaacagttgggagagccacgtgggcagcctggtggaaggagaccccattgtg
gccctgtcctggctgcacaatggtgtgaagctggccctgcacgtggaaaagtcaggtgcc
tccagcttcggggagaagttctcccgcgtcaaattctcaccgtcactgacgctgtttggc
ggcaagcctatggagggctggatcgcagtgacggtcagtggcctggtcaccgtgtctctg
ctcaagcccagcgggcaggtgctaacatccacggagagtctgtgccggctgcgtggccgt
gtggccctggctgacatcgccttcactggtggtggcaacatcgtggtggccactgcggac
ggcagcagcgcctcccctgtgcagttctacaaggtatgcgtgagcgtggtcagcgagaag
tgccgcattgacaccgagatcctgccctcgctcttcatgcgctgcaccaccgacctcaac
cgcaaggacaagttccccgccatcacccacctcaagttcctggcccgcgacatgtcggag
caggtgctcctgtgtgcgtccagccagacgagcagcatcgtggagtgctggtccctgcgg
aaggaggggctcccggtgaacaatgttttccagcagatctcacctgtggtcggcgacaaa
cagcccatgatcctgaaatggcggatcctgtcggccacgaatgacctggaccgcgtgtct
gccgtggcgctgccaaagctgcccatctcactcaccaacaccgacctgaaggtggccagc
gacacccagttctaccctggcctcgggctggccctggcctttcatgacggcagcgtccac
atcgtgcaccggctgtcgctgcagagcatggccgtcttctacagctcggccgccccacgc
tctgcagatgagccggccatcaagcgtccgcgggccagcggccccgccgtccacttcaag
gccatgcagctctcctggacttcactggccttggtcggcatcgacaaccatgggaagctg
agcatgctgcgcatctcaccgtccatgggccacacgctggacgtgagcctggccctgcgg
cacctgctgttcctgctggagtactgtatggtgacgggctacgactggtgggacacgctg
ctgcacgtgcagcccgctatggtgcagagcctggtggagaagctgcacgaggagtacacc
cgccagaacgctgccctgcagcaggtcctatccacccggatcctggccatgaaggcctca
ctgtgcaagctgtccccctgcacggtggcccgtgtgtgtgactaccatgccaagctgttc
ctggtggccgtaagctccacgctcaagtctctcctgcgcccgcacttccttaacaccccc
gacaagagtcctggtgaccggctgaccgaggtctgcagcaagatcaccgacgccgacatc
gacaaggtcatgatcaacctcaagacagaggagttcgtcctggacatgaacacgctccag
gcgctgcagcagcttctgcagtgggtgggggacttcgtgctctacctgctggccagcctg
cccaaccagggctccccgctgcggccgggccacagcttcctgcgggacgggccctcactg
ggcctgctgcgcgagctcatggtggtcatccgcatctgggggctgctgaagcccggctgc
ctgcccgtgtacacggccacctcagacacccaggacagcatgtccctgctcttccgtctg
ctcaccaagctctggatctgctgccgcgacgagggccccacaagcgagccggacgaggcg
ctggtggacgagtgttgcctgctgcccagccagctgctcatccccagcctggactggctg
cctgtcagcgacggcctggtcagccgcctgcagcccaagcagcctctgcgcctgcacttc
ggcaaggcccccccgctgcctgccggcgcgggctccctgccactggacggcctggtccgg
gctccgggccagcccaaggtcgaccacctgcgcaggctgcacctgggagccttccccacg
gaggagtgcaagacgtgcaccaggtgtggctgcgtcaccatgctcaggtcacccaataag
acgacagctgtcaagcagtgggagcagcgttggatcaagaactgtctgtgcggggggctg
tggcggcgggtgcccctcagctgcccctga
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