Lutra lutra (Eurasian river otter): 125087421 Help Entry 125087421         CDS       T08100                                  Name (RefSeq) collagen alpha-1(I) chain   KO K06236   collagen type I alpha Organism llv  Lutra lutra (Eurasian river otter) Pathway llv04151   PI3K-Akt signaling pathway llv04510   Focal adhesion llv04512   ECM-receptor interaction llv04611   Platelet activation llv04820   Cytoskeleton in muscle cells llv04926   Relaxin signaling pathway llv04933   AGE-RAGE signaling pathway in diabetic complications llv04974   Protein digestion and absorption llv05146   Amoebiasis llv05165   Human papillomavirus infection llv05205   Proteoglycans in cancer llv05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:llv00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     125087421   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     125087421  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     125087421   09142 Cell motility    04820 Cytoskeleton in muscle cells     125087421  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     125087421   09152 Endocrine system    04926 Relaxin signaling pathway     125087421   09154 Digestive system    04974 Protein digestion and absorption     125087421  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     125087421   09172 Infectious disease: viral    05165 Human papillomavirus infection     125087421   09174 Infectious disease: parasitic    05146 Amoebiasis     125087421   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     125087421   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     125087421  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:llv00536]     125087421 Glycosaminoglycan binding proteins [BR:llv00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    125087421 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  125087421 NCBI-ProteinID:  XP_047563680 LinkDB All DBs Position 16:complement(25655504..25673026) Genome browser AA seq 1460 aa AA seqDB search MFSFVDLRLLLLLAATALLTHGQEEGQEEDIPPVTCVQNGLRYYDRDVWKPEACRICVCD NGNVLCDDVICDETKSCPGAQVPPGECCPVCPDGEASPTDQETAGVEGPKGDTGPRGPRG PAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSTGGISVPGPMGPS GPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGER GPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPR GLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGSE GPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPS GPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPTGLPGPP GERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSP GSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPP GAVGPAGKDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVP GDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAP GLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGEA GPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPA GPTGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKE GGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLP GQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGSPGAEGSP GRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAGPIGPVGAR GPTGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPP GSAGSPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQP PQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKM CHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPQVAQKNWYISKNPKEKRHV WYGESMTDGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNL KKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGAWGKTVIEYKTTKTSRLPIIDVAP LDVGAPDQEFGMDIGPVCFL NT seq 4383 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg cacggccaagaggagggccaagaagaagacatcccaccagtcacctgcgtacagaacggc ctcaggtactatgaccgagacgtatggaaacccgaggcctgccggatctgtgtctgcgac aacggcaacgtgttgtgcgatgacgtgatctgcgacgaaaccaagagctgtcccggcgcc caagtccccccgggcgagtgctgccccgtctgccccgacggcgaggcgtcacctacggac caagaaaccgcaggagtcgagggacccaagggagacactggtccccgaggtccaagggga cctgccggcccccctggccgagatggcatccccggacagcctggacttcccggacccccc ggacctcccggaccccccggaccccctggcctcggaggaaactttgctccccagatgtct tatggctatgatgagaaatcaactggaggaatctccgtgcctggccccatgggtccttct ggtcctcgtggtctccctggcccccctggcgcacctggtccccaaggtttccaaggcccc cctggtgagcccggcgagcctggagcctcaggtcccatgggtccccgcggtccccctggt ccccctggcaagaacggagatgatggtgaagctggaaagcctggtcgtcctggtgagcgt ggccctcctggacctcagggtgctcgtggattgcctggaacagctggccttcctggaatg aagggacacagaggtttcagtggtttagatggtgccaagggagatgctggtcctgctggt cccaagggcgagcctggtagtcctggtgaaaatggagctcctggtcagatgggcccccgt ggtctgcctggtgagagaggtcgccccggagcccccggtcctgctggtgctcgtggaaac gatggtgctactggggctgctggaccccccggtcccactggccccgctggtcctcctggc ttccctggtgctgttggtgctaagggtgaagctggtccccaaggagcccgaggctctgag ggtccccagggtgtgcgtggtgagcccggcccccctgggcctgctggtgctgctggtcct gctggaaaccctggtgctgacggacagcctggtgctaaaggtgctaatggcgctcctggc attgctggtgctcccggcttccccggtgcccgaggcccctctggaccccagggccccagc ggtcctcctggtcccaagggtaacagcggtgaacctggtgctcccggcaacaaaggagac actggcgccaagggagagcccggacccactggtattcaaggaccccctggccccgctggg gaagaaggaaagagaggagcccgaggtgaacctggacccactggcctgcctggaccccct ggcgagcgtggtggacctggtagccgcggtttccctggtgcagatggtgttgctggtccc aagggtcctgctggtgaacgtggttcccccggccccgctggccccaaaggttctcctggt gaagctggtcgccctggtgaagctggtctgcccggtgccaagggtctgactggaagtccc ggcagccccggtcccgacggcaaaaccggcccccctggtcctgctggtcaagatggtcgc cccggacccccaggcccccctggtgcccgtggtcaggctggagtgatgggcttccctggg cctaaaggtgctgctggagagcctggcaaggctggagagcgaggcgtgcctggtccccct ggtgctgttggtcctgctggcaaagatggagaagccggagctcagggagcccctggccct gccggccctgctggtgagagaggtgaacaaggtcccgctggctcccctggattccagggt ctccctggccccgctggtcctcctggggaagctggcaaacccggcgaacagggtgttcct ggcgatcttggtgcccccggcccctctggagcacgaggcgagagaggtttccccggtgaa cgtggcgtgcaaggacctcccggccccgcaggtccccggggagccaatggtgcccctggc aatgatggtgctaagggtgatgctggtgcccctggagccccaggtagccagggcgctcct ggccttcagggaatgcctggtgaacgaggtgcagctggtcttcctggtcctaagggtgac agaggtgatgctggtcccaaaggtgctgacggttctcccggcaaagatggtgtccgtggt ctgactggccccattggtcctcctggccccgctggtgcccctggtgacaagggtgaagca ggtcctagcggccctgctggtcctactggagctcgtggcgcccccggagaccgcggtgag cctggtccccctggtcctgctggcttcgctggcccccctggtgctgatggccaacccggt gctaaaggcgaacccggtgatgctggtgctaaaggcgacgccggtcccccaggccccgct ggccccactggcccccctggccccattggtaacgttggtgctcctggacccaaaggtgct cggggcagtgctggtccccctggtgctaccggtttccctggtgctgctggccgagtcggt ccccccggcccctctggaaatgctggaccccctggccctcccggccccgctggcaaagaa ggcggcaaaggtccccgtggtgagactggccccgctggacgtcccggtgaagtcgggccc cccggtccccccggccctgctggcgagaaaggatcccctggtgccgacggaccagctggt gctcctggcactcccggacctcaaggcatcgctggacagcgtggtgtggtcggcctgccc ggtcagcgaggagagagaggcttccccggtctccccggcccctctggtgaacctggcaaa caaggtccttctggagccagtggtgagcgtggcccccctggacccatgggcccccctgga ttggctggaccccctggcgagtctggacgcgagggatctcctggtgctgaaggctcccct ggacgagatggttctcctggccccaagggtgaccgtggtgagaccggccctgctggaccc cccggtgctcccggtgctcctggtgcccccggccccgtgggccctgctggcaagaatggt gaccgtggtgagactggtcctgctggtcctgctggtcccatcggccctgttggagctcgt ggtcccactggaccccaaggtccccgtggtgacaagggtgagacaggcgaacagggtgac agaggcataaagggtcaccgtggcttctctggtctccagggtcctcctggtcctcccggc tctcctggtgaacaaggtccttctggagcttctggtcctgctggtccccgaggtccccct ggctctgccggctctcctggcaaagacggactcaacggtctcccaggccccatcggcccc cccggtcctcgcggtcgcactggtgatgctggtcctgttggtccccccggccctcctgga ccccctggtccccctggtcctcccagcggcggtttcgacttcagcttcctgccccagcca cctcaagagaaggctcacgatggcggccgctactaccgggctgatgacgccaatgtggtc cgtgaccgtgacctcgaggtggacaccaccctcaagagcctgagccagcagatcgagaac atccggagccctgaaggaagccgcaagaacccagcccgcacctgccgtgacctcaagatg tgccactctgactggaagagcggagaatactggattgaccccaaccaaggatgcaacctc gatgccatcaaggtcttctgcaacatggagacaggtgagacctgcgtgtaccccactcag ccccaggtggcccagaagaactggtacatcagcaagaaccccaaggaaaagaggcatgtc tggtacggcgagagcatgaccgacggattccagttcgagtatggtggccagggctccgat cctgccgatgtggccatccagctgacgttcctgcgcctgatgtccaccgaggcttcccag aacatcacctaccactgcaagaacagcgtggcctacatggaccagcagaccggcaacctc aagaaggccctgctgctccagggctccaacgagatcgagatcagggccgagggcaacagc cgcttcacctacagcgtcacctacgacggttgcacgagtcacaccggagcctggggcaag acagtgatcgaatacaaaaccaccaagacctcccgcttgcccatcatcgatgtggcacca ttggacgttggcgccccagaccaggaattcggcatggatattggccctgtctgcttcctg taa

DBGET integrated database retrieval system