Lutra lutra (Eurasian river otter): 125087436
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Entry
125087436 CDS
T08100
Name
(RefSeq) chondroadherin
KO
K06248
chondroadherin
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04151
PI3K-Akt signaling pathway
llv04510
Focal adhesion
llv04512
ECM-receptor interaction
llv05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125087436
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125087436
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125087436
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
125087436
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
llv00535
]
125087436
Proteoglycans [BR:
llv00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
125087436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
LRR_14
LRR_9
LRRCT
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
125087436
NCBI-ProteinID:
XP_047563716
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Position
16:complement(25869350..25873809)
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AA seq
408 aa
AA seq
DB search
MLHVGAGSGCRLRSGPPYKEGRSPECRGLAAARAPPPLPPRPRPQVSLAMAPPMLLLSLG
LLASLLPALAACPQNCHCHSDLQHVICDKVGLQKIPKVSEKTKLLNLQRNNFPVLATNSF
RAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLD
HNKVTELPRGLLSPLVNLFILQLSNNKIRELRAGAFQGAKDLRWLYLSGNALSSLQPGAL
DDVENLAKFHLDSNQLSSYPSSALSKLRVVEELKLSHNPLKSIPDSAFQSFGRYLETLSL
DDTNLEKFSDGAFLGVTTLKHVHLENNRLTQLPSNFPFDSLETLTLTNNPWKCTCQLRGL
RRWLEAKTSRPDATCASPAKFKGQHIRDTDAFRGCKFPTKRSKKAGRH
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgctccacgtaggagctggctccggctgcaggctgcggtcagggccaccgtataaagag
ggccggagcccagagtgccgaggacttgccgctgctcgcgccccgccgccgctgcccccc
aggccccggccccaggtgtccctggccatggccccaccgatgctcttgctcagcctcggc
ctcctggccagcctgctgccggccctggctgcctgcccccagaactgccactgccacagc
gacttgcagcacgtcatctgcgacaaggtggggctgcagaagatccccaaggtgtctgag
aagaccaaactgctcaacctgcagcgcaacaacttcccggtgctggccaccaactcgttc
cgggccatgccgaacctcgtgtcgctgcacctgcagcactgccagatccgcgaggtggcg
gccggtgccttccggggcctcaagcagctcatctacctgtacctgtcccacaacgacatc
cgcgtgctgcgtgcgggcgccttcgatgacctgaccgagctcacctacctctacctggac
cacaacaaggtgaccgagctgccccgagggctgctctccccactggtcaaccttttcatc
ctgcagctcagtaacaacaagattcgggagctgcgcgccggcgccttccagggcgccaag
gatctgcgctggctctacctgtccggaaacgccctcagctcgctgcagcccggcgctctg
gacgatgtggagaacctcgccaagttccacctggacagcaaccagctgtccagctacccc
tcgtcggctctcagcaagctgcgggtagtggaggagctgaagctgtcccacaaccccctg
aaaagcattcctgacagtgccttccagtctttcggcaggtacctggagaccctatcgctg
gacgacaccaacctggagaagttctctgacggtgccttcctgggtgtgaccaccctgaaa
cacgtccacctggagaacaaccgcttgacccagctgccctccaacttccccttcgacagc
ctagagaccctcacccttaccaacaacccctggaagtgtacctgccagctccggggtctt
cggaggtggctggaagccaagacttcccgccctgatgccacttgtgcctcgcccgccaag
ttcaaaggccagcatatccgtgacacggacgctttccgcggctgcaagttccccactaag
aggtccaagaaagctggccgccattaa
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