Lutra lutra (Eurasian river otter): 125087450
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Entry
125087450 CDS
T08100
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03082
ATP-dependent chromatin remodeling
llv04714
Thermogenesis
llv05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125087450
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
125087450
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
125087450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125087450
03036 Chromosome and associated proteins [BR:
llv03036
]
125087450
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125087450
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125087450
PBAF complex
125087450
GBAF(ncBAF) complex
125087450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
125087450
NCBI-ProteinID:
XP_047563740
LinkDB
All DBs
Position
16:14887954..14907980
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AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAGGVGGPGAAAFR
PMGPAGPAAQYQRPGMSPGSRMPMAGLQVGPPAGSPFGTAAALRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKAEGDTAGTTGPPGGTPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgctgcctccgctgagtcctggtggcggcgcc
gttgctgcggccctgggagcgccgcctccgccagcgggacccggcatgctgcccggaccg
gcgcttagggggccagggccggccggaggcgtggggggccccggggccgccgccttccgc
cccatgggccccgcgggccccgcggcgcagtaccagcggcctggtatgtcaccagggagc
cggatgcccatggctggcttgcaggtgggacctcccgctggatccccctttggcacagct
gctgcacttcgacctgggatgccacccaccatgatggacccattccgcaaacgcctgctt
gtgccccaggcccagcccccaatgcctgcccagcgccgggggttgaagaggaggaagatg
gcagataaggttctacctcagcgaattcgggagcttgtcccagagtctcaggcgtacatg
gatctcttggcttttgagcggaagctggaccagaccattgcccgaaagcggatggagatc
caagaggccatcaaaaagcctctgacgcaaaaacgaaagctgcggatctatatttccaat
acgttcagtcccagcaaggcagaaggtgacactgcggggaccacagggccccccggggga
acccccgcaggggacaaagtggcttcctgggaactccgagtggagggaaaactgctggat
gatcccagcaaacagaagaggaagttttcttcgttcttcaagagcctcgtcattgagctg
gacaaggagctgtatggccctgacaaccacctggtggagtggcaccggatgcctaccacc
caggagactgatggcttccaggtgaaacggcctggagacctcaacgtcaagtgcaccctc
ctgctcatgctggatcatcagcctccccagtacaagttggacccccgactggcaaggctg
ctgggggtgcacacacagaccagggcggccatcatgcaggccctatggctttatatcaaa
cacaaccagctgcaggacgggcacgagcgcgagtacatcaactgcaaccggtacttccgc
cagatcttcagttgtggccgccttcgtttctccgagattcccatgaagctggctggtttg
ctgcagcacccagaccccattgtcatcaaccatgtcatcagtgtagaccctaacgaccaa
aagaagactgcatgttatgacatcgacgtggaggtggatgacccactgaaggcccagatg
agcaattttctggcctctaccaccaatcagcaggagatcgcttcccttgatgtcaagatc
catgagaccattgagtccatcaaccagctgaagacacagagggatttcatgctcagcttt
agcaccgaccctcaggacttcatccaggaatggctccgctcccagcgccgagacctcaag
atcatcactgatgtgatcgggaatccggaggaggagagacgagctgctttctaccatcag
ccatgggcccaggaagcagtggggaggcacatttttgccaaggtgcagcagcgaaggcag
gaactggaacaggtgctgggaatccgcttgacctaa
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