KEGG   Lutra lutra (Eurasian river otter): 125087468
Entry
125087468         CDS       T08100                                 
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03013  Nucleocytoplasmic transport
llv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125087468
   03015 mRNA surveillance pathway
    125087468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:llv03019]
    125087468
Messenger RNA biogenesis [BR:llv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     125087468
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 125087468
NCBI-ProteinID: XP_047563789
LinkDB
Position
16:complement(21974907..21996985)
AA seq 701 aa
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLSSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAVNSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHDPDDIKPRRIRKPRFGSPPQRDPNWIVERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSTPRNNSRSGGFKEGRAGFRPMEAGGQHGGRSGETVKHESSYRSRRLEQTPVR
DPSPEADAQVLGSPEKEEAASEIPAAAPDTAPPAPDRPVEKKSYSRARRTRIKAGDAVKI
AEEVPPPPEGLNPAPQVPETTPPPPAKTGNWEAPVDSTTSGLEQDVAQLNITEQNWSPGQ
PSFLQPRELRGMPNHIHMGAGPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHISI
MEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTAAPLPNPGLYPP
PVSMSPGQPPPQQLLAPTYFSAPSVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVYG
GVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq 2106 nt   +upstreamnt  +downstreamnt
atggcggatcggcggcggcagcgcgcttcgcaggacacggaggacgaggagtctggtgct
tcgggctcggacagcggcggctcccccgcgcggggcggcgggagctgtagcggtagtgct
ggaggcggtggcagcggctctctgtcttcccagcgcggaggccgagcgggggcccttcat
ctgcggcgggtggagagcgggggggctaagagcgctgaggagtcggaatgtgagagtgaa
gatggcatcgagggcgatgctgtgctgtcggattatgaaagtgcagaagactctgaaggt
gaagaaggggaatatagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgctgttaattcttcagcaaaagaagagaaaggagaagaaaagcccgacaccaaaggc
actgtgactggagagaggcagagtggggatggacaggagagcacagaacctgtggagaac
aaagtgggtaaaaagggccctaagcatttggatgatgatgaagatcggaagaacccagca
tacataccccggaaagggcttttctttgagcatgatcttcgaggacaaacgcaggaggag
gaagtcagacccaaggggcgtcagcgaaagctctggaaggatgagggtcgctgggaacat
gacaagttccgggaagatgaacaagctccaaagtcccgacaggagctcattgccctttat
ggctatgatatccgctcagctcacgatcccgatgacatcaaaccccgaagaatccggaag
cctaggtttgggagtcctccacaaagagatccaaactggattgttgagcgaccaaacaag
tcccatcgccaccagggtcctgggggcaccctaccaccaaggacatttatcaatagaaat
gctgcagggactggccgaatgtctactcccaggaataactctcgatctgggggcttcaag
gaaggtcgtgctggttttaggcctatggaggctggtgggcagcatggtggtcggtctggt
gagactgttaaacatgaaagcagttaccgatcacggcgcctagagcagactcctgtgcgg
gacccatctccagaagctgatgctcaagtgcttggcagtcccgagaaggaagaggcggcc
tcagagataccagctgctgctcccgacactgcaccaccagcccctgacagacctgttgag
aagaaatcctactcccgggcaagaagaaccagaatcaaagctggagatgcagtcaagatt
gcagaagaggtgccacctccacccgaagggctaaacccagcacctcaagtcccagaaacg
acccctcctccacctgctaagactggaaactgggaggctccagtggattctacaacaagt
ggacttgagcaagacgtggcacaactaaatataacagaacagaattggagtcccgggcag
ccttcattcctgcaaccacgtgagcttcggggtatgcccaaccacatacatatgggagca
ggacctcagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaacgctat
tcatctcagcggcaaagacctgtgccagagccccctgctcctcctgtgcacatcagtatc
atggagggacattactatgatccactgcagttccagggaccaatctatacccatggtgac
agccctgccccactgcctccccagggcatgattgtgcagccagaaatgcaccttccccac
ccaggtttacatccccaccagactgcggcacctctgcccaatccgggcctctatccccca
ccagtgtccatgtccccagggcagccaccacctcagcagttgcttgctcctacttacttt
tctgctccaagcgtcatgaactttggtaatcccagttacccttatgctccaggggcactg
cctcccccaccgccacctcatctgtatcctaatacgcaggccccatcacaggtatatgga
ggagtgacctactataaccctgcccagcagcaggtgcagccaaagccctccccaccccgg
aggactcctcagccagtcaccatcaagcccccaccacctgaggttgtaagcaggggttcc
agttaa

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