Lutra lutra (Eurasian river otter): 125087468
Help
Entry
125087468 CDS
T08100
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03013
Nucleocytoplasmic transport
llv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125087468
03015 mRNA surveillance pathway
125087468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125087468
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125087468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
125087468
NCBI-ProteinID:
XP_047563789
LinkDB
All DBs
Position
16:complement(21974907..21996985)
Genome browser
AA seq
701 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLSSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAVNSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHDPDDIKPRRIRKPRFGSPPQRDPNWIVERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSTPRNNSRSGGFKEGRAGFRPMEAGGQHGGRSGETVKHESSYRSRRLEQTPVR
DPSPEADAQVLGSPEKEEAASEIPAAAPDTAPPAPDRPVEKKSYSRARRTRIKAGDAVKI
AEEVPPPPEGLNPAPQVPETTPPPPAKTGNWEAPVDSTTSGLEQDVAQLNITEQNWSPGQ
PSFLQPRELRGMPNHIHMGAGPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHISI
MEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTAAPLPNPGLYPP
PVSMSPGQPPPQQLLAPTYFSAPSVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVYG
GVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcggcggcggcagcgcgcttcgcaggacacggaggacgaggagtctggtgct
tcgggctcggacagcggcggctcccccgcgcggggcggcgggagctgtagcggtagtgct
ggaggcggtggcagcggctctctgtcttcccagcgcggaggccgagcgggggcccttcat
ctgcggcgggtggagagcgggggggctaagagcgctgaggagtcggaatgtgagagtgaa
gatggcatcgagggcgatgctgtgctgtcggattatgaaagtgcagaagactctgaaggt
gaagaaggggaatatagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgctgttaattcttcagcaaaagaagagaaaggagaagaaaagcccgacaccaaaggc
actgtgactggagagaggcagagtggggatggacaggagagcacagaacctgtggagaac
aaagtgggtaaaaagggccctaagcatttggatgatgatgaagatcggaagaacccagca
tacataccccggaaagggcttttctttgagcatgatcttcgaggacaaacgcaggaggag
gaagtcagacccaaggggcgtcagcgaaagctctggaaggatgagggtcgctgggaacat
gacaagttccgggaagatgaacaagctccaaagtcccgacaggagctcattgccctttat
ggctatgatatccgctcagctcacgatcccgatgacatcaaaccccgaagaatccggaag
cctaggtttgggagtcctccacaaagagatccaaactggattgttgagcgaccaaacaag
tcccatcgccaccagggtcctgggggcaccctaccaccaaggacatttatcaatagaaat
gctgcagggactggccgaatgtctactcccaggaataactctcgatctgggggcttcaag
gaaggtcgtgctggttttaggcctatggaggctggtgggcagcatggtggtcggtctggt
gagactgttaaacatgaaagcagttaccgatcacggcgcctagagcagactcctgtgcgg
gacccatctccagaagctgatgctcaagtgcttggcagtcccgagaaggaagaggcggcc
tcagagataccagctgctgctcccgacactgcaccaccagcccctgacagacctgttgag
aagaaatcctactcccgggcaagaagaaccagaatcaaagctggagatgcagtcaagatt
gcagaagaggtgccacctccacccgaagggctaaacccagcacctcaagtcccagaaacg
acccctcctccacctgctaagactggaaactgggaggctccagtggattctacaacaagt
ggacttgagcaagacgtggcacaactaaatataacagaacagaattggagtcccgggcag
ccttcattcctgcaaccacgtgagcttcggggtatgcccaaccacatacatatgggagca
ggacctcagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaacgctat
tcatctcagcggcaaagacctgtgccagagccccctgctcctcctgtgcacatcagtatc
atggagggacattactatgatccactgcagttccagggaccaatctatacccatggtgac
agccctgccccactgcctccccagggcatgattgtgcagccagaaatgcaccttccccac
ccaggtttacatccccaccagactgcggcacctctgcccaatccgggcctctatccccca
ccagtgtccatgtccccagggcagccaccacctcagcagttgcttgctcctacttacttt
tctgctccaagcgtcatgaactttggtaatcccagttacccttatgctccaggggcactg
cctcccccaccgccacctcatctgtatcctaatacgcaggccccatcacaggtatatgga
ggagtgacctactataaccctgcccagcagcaggtgcagccaaagccctccccaccccgg
aggactcctcagccagtcaccatcaagcccccaccacctgaggttgtaagcaggggttcc
agttaa
DBGET
integrated database retrieval system