Lutra lutra (Eurasian river otter): 125087475
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Entry
125087475 CDS
T08100
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03030
DNA replication
llv03420
Nucleotide excision repair
llv03430
Mismatch repair
llv03440
Homologous recombination
llv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125087475
03420 Nucleotide excision repair
125087475
03430 Mismatch repair
125087475
03440 Homologous recombination
125087475
03460 Fanconi anemia pathway
125087475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125087475
03032 DNA replication proteins [BR:
llv03032
]
125087475
03400 DNA repair and recombination proteins [BR:
llv03400
]
125087475
Transcription factors [BR:
llv03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125087475
DNA replication proteins [BR:
llv03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
125087475
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
125087475
MMR (mismatch excision repair)
125087475
DSBR (double strand breaks repair)
HR (homologous recombination)
125087475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
125087475
NCBI-ProteinID:
XP_047563798
LinkDB
All DBs
Position
16:45773356..45849934
Genome browser
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSVKPILQVINIRPIITGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEKEQLSSNCICQINRFIVNTLKDGRRVVILMELDILKSAEAVGLKIGNPVPYNE
GHGQQQVVPPPVSAASPPASKPQQQNGSSAMGSTASKTYGASKTFGKAGGTSLGNSSGGT
QVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QVDKFFPLIDMNKVYYISKGILKIANKQFTAVKNDYEMTFNNETSVTPCEDGHHLPTVQF
DFTGIGDLENKPKDSLIDIIGICKSYEDATKITVKSNNREVSKRNIYLMDMSGKVVTATL
WGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLKSGGTGGSNTNWKTLYEAKSENLGHGDKADYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPSFKYRMILAVNIADFQENQWVTCFQESAEAVI
GQSTAHLGELKEKNEQAFEEVFQNANFRSFIFRIRVKLETYNDESRIKATVMDVKPVDYK
EYGRRLIINIRRNALM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccataatgcaacagggagatacgtcc
gtaaaacccatcctccaagtcattaacatccgtcccattattacagggaatagtccaccc
cgttatcgattgcttatgagtgatggcttgaacactctatcctctttcatgttggcaaca
cagttgaaccctctcgttgagaaagaacaattgtctagcaactgtatttgccagattaac
cgattcattgttaacaccctgaaagatggaaggagagtagttattttgatggagttagac
attttgaaatcagctgaagccgttggattaaagattggcaatcctgtgccctataatgaa
ggacacgggcagcagcaggtagttcctccccctgtctcagcggccagtccaccagccagc
aagccccagcagcagaatgggagctcagcaatgggttccactgcatctaagacttatggg
gcctcaaagacatttggaaaagctggaggtaccagcctcgggaatagttctggaggaaca
caggtcaaagtggtacccattgccagcctcaccccttaccaatccaagtggactatctgt
gctcgagttaccaacaaaagtcagatccgtacctggagcaattcccgaggggaagggaag
cttttctccatagaactagttgatgaaagtggtgaaatcagagctactgctttcaatgag
caagtggacaagttctttccccttatcgacatgaacaaggtctattatatctctaaaggc
atcctgaagattgctaacaaacagttcacagcggttaaaaatgactacgagatgaccttc
aacaatgagacttccgtcacgccctgtgaagatggtcatcatttacctacagttcagttt
gatttcacagggattggagacctggagaacaagcctaaggactcacttatagacataatt
gggatctgcaagagctacgaagatgccaccaaaatcacagtgaagtctaacaacagagaa
gtttccaagagaaatatctacttgatggacatgtcagggaaagtggtgactgctactctg
tggggagaggatgctgatagattcgatggttctagacaacccgtgatggctatcaaagga
gctagagtttctgattttggtggacggagcctttctgtactgtcttcaagcacggtcatt
gtgaatcctgacatcccagaggcctataagcttcgtggatggttcgactcagaaggacaa
gccttagatggtgtttctatctctgatctaaagagtggaggaacaggagggagcaatacc
aactggaaaactttgtatgaggctaaatcagagaacctgggccatggtgacaaggccgac
tatttcagctctgtggcgacggtagtgtatcttcgcaaagaaaactgtatgtatcaggcc
tgcccaactcaggactgcaataagaaagtgattgatcagcagaatggactctaccgctgt
gagaagtgcgacagtgaatttcccagcttcaagtaccgcatgatcctggcggtaaatatt
gctgattttcaagagaatcagtgggtcacttgtttccaggagtctgcagaggccgtcatt
ggacaaagcactgctcatcttggggagttaaaagagaagaatgagcaagcatttgaggaa
gttttccagaatgccaacttccgatctttcatattcagaatcagagtgaaactagagacc
tacaatgatgaatctcgaattaaggccactgtgatggacgtgaagcccgtggactacaaa
gaatatggcagaaggctgatcatcaacatcaggagaaacgcgctcatgtga
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