Lutra lutra (Eurasian river otter): 125087715
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Entry
125087715 CDS
T08100
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
llv03009
]
125087715
Enzymes [BR:
llv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125087715
Ribosome biogenesis [BR:
llv03009
]
Eukaryotic type
90S particles
Helicases
125087715
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
125087715
NCBI-ProteinID:
XP_047564282
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All DBs
Position
16:complement(37261299..37283210)
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AA seq
599 aa
AA seq
DB search
MDAHDLFRRLGVGAKFDVKRFSADAARFQVGKRKHDFDSSEILQGLDFFGNKKSVPGECG
LSSTHQELQDEEKKEESLTEKKREQNKKKRKMMLSETTSQEEGSTIQWISSVEAKIEDKK
IKREKKLTSGKLENLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKISSRLLQNI
LDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALII
SPTRELANQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLL
KQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDV
EQWCKLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQ
SIERAKELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKG
VNLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQQAGCPVPE
YIKGFQKLLSKQKKKMIKKPLERESISTTPKYFLEKAKNKRKKVPGQNSKKKVALEDKS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcacgatctctttcgccggcttggcgtgggggccaaattcgacgtgaaacgt
ttctctgcggacgccgcgcgattccaggtaggaaaaaggaaacatgattttgattcttca
gagattctgcagggactggacttctttggaaacaagaagtctgtcccaggtgagtgtgga
ttatcaagcactcatcaggagcttcaagatgaagagaaaaaagaagagagtctaactgaa
aagaagagggaacagaacaagaaaaagaggaaaatgatgttatcagaaactacttctcaa
gaagaaggttctactatacagtggatatcatctgtggaagcaaagattgaagataaaaaa
attaagagagaaaagaagctaacttcaggaaagttggagaatcttagaaaagaaaagata
aacttcttccggaataaacataaaattcacgtccaaggaactgatcttcctgacccaatt
gctacgtttcagcaacttgaccaagaatataaaatcagttctcgactgcttcagaacatt
ctggatgcaggcttccagatgcctacaccaatccaaatgcaagccattccagttatgctg
catggtcgagaacttctggcttctgctcctaccggatctggaaagactttggcttttagt
attcccattttgatgcaactaaaacaacccacaaataaaggctttagagctctgattata
tcaccaacacgagaacttgccaaccagattcacagagagttagtaaaaatctcagaggga
acaggattcaggatacacatgatccacaaagcagcagtggcagccaagaaatttggacct
aaatcatctaagaagtttgatattcttgtgactactccgaatcgactaatctatttatta
aagcaagatcctccaggaatagatttaacaagtgtagagtggctggtagtagatgaatca
gacaaactgtttgaagatggcaaaactgggttcagagaccagctggcttccattttcctg
gcctgcacatcccataaggtcagaagagctatgttcagtgcaacttttgcatatgatgtt
gagcagtggtgcaagctcaacctggacaatgtcattacggtatccattggagcaaggaat
tctgcagtagaaactgtagaacaagagcttctctttgttgggtctgagactgggaaactt
ctggccatgagagaacttgttaaaaagggtttcaatccacctgttcttgtttttgttcag
tccatcgaaagggctaaagaactttttcatgagctcatatatgaaggtattaatgtagat
gttattcatgcagacagaacacagcaacagagagataacacagtccacagcttccgagct
ggaaaaatctgggttcttatttgtacagccttgctggcccgtgggattgattttaaaggt
gtgaacttggtgatcaactatgattttccaaccagctcagtggaatacatccacaggata
ggtcgaactggaagagcagggcataaaggaaaagctgttacatttttcactgaagatgat
aaaccattattaagaagtgttgccaatgttatacagcaggccggatgtcctgtgccagaa
tacataaaaggtttccagaaactactaagcaaacaaaagaaaaagatgattaagaagcca
ttggaaagggagagcattagtacaactccaaaatatttcttagaaaaggctaagaataaa
cggaaaaaggtccctggtcagaacagcaagaagaaagtagctcttgaagacaaaagttaa
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