Lutra lutra (Eurasian river otter): 125087891
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Entry
125087891 CDS
T08100
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04136
Autophagy - other
llv04140
Autophagy - animal
llv05010
Alzheimer disease
llv05014
Amyotrophic lateral sclerosis
llv05016
Huntington disease
llv05017
Spinocerebellar ataxia
llv05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125087891
04136 Autophagy - other
125087891
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
125087891
05014 Amyotrophic lateral sclerosis
125087891
05016 Huntington disease
125087891
05017 Spinocerebellar ataxia
125087891
05022 Pathways of neurodegeneration - multiple diseases
125087891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125087891
03029 Mitochondrial biogenesis [BR:
llv03029
]
125087891
Membrane trafficking [BR:
llv04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
125087891
Mitochondrial biogenesis [BR:
llv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
125087891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WD40_Prp19
WD40
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_HPS5
ANAPC4_WD40
EIF3I
Beta-prop_RSE1_2nd
DUF5711
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
125087891
NCBI-ProteinID:
XP_047564601
LinkDB
All DBs
Position
16:11547652..11580531
Genome browser
AA seq
446 aa
AA seq
DB search
MEAEAADGPPGGAEAALSCFSFNQDCTSLAIGTKAGYKLFSLSSVEQLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEEA
IYIHNIKDMKLLKTILDIPANPTGLCALSINHSNSYVAYPGSPTTGEIVLYDGHSLKTVC
TIAAHEGTLAAITFNASGSKLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEHLTHSRPEEPSTWTGYMGKMFMAASNYLPTQVSDMMNQ
DRAFATGRLNFSGQRNICSLSTIQKLPRLLVASSNGHLYIYNLDPQDGGECVLIKTHSLI
SSGTTEENKENDLRPSLPQSYAATVARPSTSSASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGSQKGKTKQS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggcggcggacggccccccgggcggggccgaggcggcgctcagctgcttc
tccttcaaccaggactgcacatcgctagcaattggaaccaaagccggttataagctgttc
tccttgagttctgtggagcaactggaccaagtccatggaagcaatgagatcccggatgtc
tacatcgtggagcgccttttctccagcagcctggttgtggtggtcagccacacgaagcca
cggcagatgaacgtctatcacttcaagaaaggcacggagatctgtaactacagctactcc
agcaacatcttgtccatacggctgaaccggcagaggctgctggtgtgcctggaggaggcc
atttacattcacaacatcaaggacatgaagctgttgaagaccatcctggatattcctgca
aacccaacaggtctgtgtgccctctctatcaaccattccaattcgtatgtggcctaccct
ggaagcccgactacaggcgagatcgtgctttacgatggacactccctgaaaacagtctgc
acgattgctgcccacgaggggacgctggccgccatcaccttcaatgcctcgggctccaaa
ctagcaagcgcctctgaaaagggcaccgtcatccgggtgttctctgtaccggacgggcaa
aagctctacgagtttcggagaggcatgaaaaggtacgtgacaatcagctcgctcgtgttc
agtatggactctcagttcctctgtgcctccagcaacaccgagaccgtgcacatcttcaag
ctggagcatctcactcacagccgaccagaagaaccttcgacctggactggctacatggga
aaaatgttcatggctgcttccaactacctccccacccaggtgtcagacatgatgaaccag
gaccgtgccttcgccaccggacgtctgaacttctccgggcagaggaacatctgctcgctc
tccacgatccagaaactgccgaggctgctggtcgcatcgtcgaatggacacctttacatc
tacaacttggaccctcaggatggaggagaatgtgtcttaatcaagacccacagcttgatt
agctcaggaacaacggaagaaaataaagaaaatgacctcagaccttcattacctcagtct
tacgcagcaactgtagccagaccaagcacctcgtcggcctccacggtgccaggttattct
gaggacggcggagccctccgaggagaggttattcctgaacatgagtttgccacgggacca
gtgtgtcttgatgatgagaatgaattcccccctataatcttgtgccgtggaagtcagaag
ggcaaaacgaagcagtcttga
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integrated database retrieval system
