Lutra lutra (Eurasian river otter): 125087934
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Entry
125087934 CDS
T08100
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03440
Homologous recombination
llv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125087934
03460 Fanconi anemia pathway
125087934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llv03032
]
125087934
03400 DNA repair and recombination proteins [BR:
llv03400
]
125087934
Enzymes [BR:
llv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
125087934
DNA replication proteins [BR:
llv03032
]
Eukaryotic type
DNA Topoisomerases
125087934
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
125087934
FA (Fanconi anemia) pathway
125087934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Zn_ribbon_Top1
Toprim
Zn_ribbon_GRF_2
zf-C2H2_10
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
125087934
NCBI-ProteinID:
XP_047564725
LinkDB
All DBs
Position
16:complement(49819210..49847304)
Genome browser
AA seq
994 aa
AA seq
DB search
MIFPVARCALRWLERPGARTLSRAAMAVAFRGVRKILCVAEKNDAAKGIADLLSNGRMRR
REGFSKFNKIYEFDYHLYGQNVTMIMTSVSGHLLAHDFQMQFRKWQSCNPLVLFEAEIEK
YCPENFVDIKKTLERETRQCQALVIWTDCDREGENIGFEIIHVCRAVKPNLPVLRARFSE
ITPRAVRAACENLTEPDQRVSDAVDVRQELDLRIGAAFTRFQTLRLQRIFPEVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPEIFHKIKVTHDHKDGVVEFNWKRHRLFNHTACLVLY
QLCMEDPRATVVEVRSKAKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYI
SYPRTETNIFPKDLNLTALVEQQITDPRWGAFAQSILERGGPTPRNGNKSDQAHPPIHPT
KYTGSLQGDEQRLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLVILARNYLDV
YPYDHWSDKTLPVYERGARFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKARMYVGLTADKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKWVVLRQQVQKYKQVFIEAVAKAKKLDEALAQYFGEGAEVAQEEAIYPSMPEPIKKCPQ
CNKDMVLKTKKNGGFYLSCTGFPECRSAVWFPDSVLEASRDESVCPVCQPHPVYRLKLKF
KRGSLPPTMPLEFVGCIGGCDETLREILDLRFSRGPPRASQPASQPSNYLQASQSLNRMD
SAPWMPPPPATAAGGSNSVTCNCGQEAVLLTVRKEGPNQGRQFYKCNGGGCSFFLWADSG
PPEAGGPPSAASRPPGGSLGRPPATGDHRGWSGQPGDGGGGGGSGGSMSCLCSQPAITRT
VQKDGPNKGRQFHTCAKPREQQCGFFQWVDENVAPGTFRALSWPGSRGGTQGPEARSKRA
RAGSTDTGSVPKKPRKCSLCHQPGHTRPFCPQNR
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcccggtcgcccgctgcgcgctccgctggctggaacggccgggagcccggacc
ttgtcccgcgctgccatggcggtggccttccgaggcgtgcggaaaattctctgtgtggcc
gagaaaaacgacgcggccaaggggatagccgacctgctgtccaacggtcgcatgaggcgg
agggaaggattttcaaaattcaacaagatctatgaatttgattatcatctatatggccag
aacgttaccatgataatgacttcagtttctggacatttgctggctcatgatttccagatg
cagtttcgcaaatggcagagctgcaatcccctggtcctctttgaagcagaaattgaaaag
tactgcccggagaattttgtagacatcaagaaaactctggaacgagagactcggcagtgc
caggccctggtgatctggaccgactgtgatagagaaggtgaaaatatcgggtttgaaatt
atccacgtgtgcagggctgtgaagcccaatctgccggtactgagagcccgtttctcagag
atcaccccccgagccgtccgggcggcctgtgaaaacctgacggagcccgatcagagagtg
agcgatgccgtggacgtgcggcaggagctggacctgagaatcggagctgccttcactagg
ttccagaccctgaggcttcagaggatttttcccgaggtgttggcagagcagctaatcagt
tacggcagctgccagttcccgaccctggggttcgtggtggagaggttcaaagccattcag
gcttttgtgccggaaatcttccacaaaattaaagtaactcatgaccataaagatggagtc
gtagaattcaactggaaaaggcatcgtctctttaaccacacggcttgtcttgtcctctac
cagctgtgcatggaggatcccagggcaaccgtggtggaggtcaggtctaaagcaaagagc
aagtggaggcctcaagcgttggacactgtggaacttgagaagctggcttctcgaaagttg
agaataaatgctaaagaaaccatgaggattgccgaaaagctctacactcaagggtacatc
agctatcctcgcactgaaacaaacattttccccaaagacttgaacctgaccgcgctggtg
gagcagcagattacagatccacgctggggtgccttcgcccagagcattctggagcggggt
ggccccactccacgcaatgggaacaaatctgaccaagctcaccctcccatccaccccacc
aaatacaccggcagcctccagggagatgagcagcgactgtatgagttcatagtgcgccat
ttcctggcctgctgctcccaggatgctcagggccaagagaccaccgtggagatcgacatc
gcacaggaacgcttcgtggctcatggcctcgtgattttggcccgcaactatctggacgtg
tacccgtatgaccattggagtgacaagactctccctgtctacgagagaggcgcccgcttc
cagcccagcactgtggagatggtggacggggagaccagcccaccccagctgctcaccgaa
gccgacctcatcgccctcatggagaagcacggcattgggaccgatgccactcacgcggag
cacatcgagacaatcaaggcccggatgtacgtcgggctcacggcggacaagcggtttctc
ccggggcatctgggcatggggctcgtggaaggttatgactccatgggctatgagatgtcc
aagcctgatctccgggctgagctggaagctgacctgaagctgatctgtgaaggcaagaag
gacaagtgggtggttctaaggcagcaagtccagaaatacaagcaggttttcattgaagcg
gtggccaaagctaagaaattggacgaggcgttagcccagtactttggggaaggggccgag
gtggcccaggaggaagccatctacccaagcatgccggagcccatcaagaagtgtccacag
tgcaacaaggacatggtcctcaagaccaagaagaacggcgggttctacctcagctgcacg
ggcttcccagaatgccggtcagccgtgtggttccccgactctgtgctggaggccagcagg
gatgagagcgtgtgtccggtgtgtcaaccacatccggtttacagattgaagttgaagttc
aaacgcggcagccttcccccgaccatgcccctggagtttgtcggctgcatcggcggatgc
gacgagacactgcgggagatcttggacctgaggttctcacggggccctcccagagcttcc
cagccagccagccagccctcgaactacctgcaggctagccagtccctgaacagaatggac
agcgccccctggatgccacccccgcctgccactgctgcagggggcagcaactcagtgacc
tgcaactgcggccaggaggccgtcctgctcactgtgcggaaggagggccccaaccagggc
cgccagttctacaagtgcaacggcggcggctgcagcttcttcctatgggccgacagcggc
ccccccgaagctggggggcctccctccgccgcctcaagaccccctggtggctcactgggc
cgtccgcctgccacaggggaccaccggggctggtctggccaacccggggatggcggcggc
ggtggcggcagcggggggagcatgtcctgcctgtgcagccagcccgccatcacccggact
gtgcagaaggacgggcccaacaaaggccgccagttccacacgtgcgccaagcccagggag
cagcagtgcggcttctttcagtgggtggacgagaacgtggctccagggactttcagagcc
ctgagctggccgggaagcagaggaggaacccaggggccagaggccagaagcaaaagagcc
cgggctggttccacagacacggggtccgtgcccaagaaaccccggaaatgcagcctttgc
caccagcctggacacacccgtcccttctgtccccagaacagatga
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