Lutra lutra (Eurasian river otter): 125088012
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Entry
125088012 CDS
T08100
Name
(RefSeq) acid-sensing ion channel 2 isoform X1
KO
K04828
acid-sensing ion channel 2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04742
Taste transduction
llv04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
125088012
04750 Inflammatory mediator regulation of TRP channels
125088012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
llv04040
]
125088012
Ion channels [BR:
llv04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
125088012
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Motif
Pfam:
ASC
Motif
Other DBs
NCBI-GeneID:
125088012
NCBI-ProteinID:
XP_047564866
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Position
16:38915573..39930664
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AA seq
565 aa
AA seq
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MSRSGGARLPAAALTGPGRFRMAREEPAPAAVAAAGQPGGDRGGVRERALQGPGVARRGR
PSLSRAKLHGLRHMCAGRTAAGGSFQRRALWVLAFCTSLGLLLSWSSNRLLYWLSFPSHT
RVHREWSRQLPFPAVTVCNNNPLRFPRLSKGDLYYAGHWLGLLLPNRTARPLVSELLRGD
EPRRQWFRKLADFRLFLPPRHFEGISAAFMDRLGHQLEDMLLSCKYRGELCGPHNFSSVF
TKYGKCYMFNSGEDGKPLLTTVKGGTGNGLEIMLDIQQDEYLPIWGETEETTFEAGVKVQ
IHSQSEPPFIQELGFGVAPGFQTFVATQEQRLTYLPPPWGECRSSEMGLDFFPVYSITAC
RIDCETRYIVENCNCRMVHMPGDAPFCTPEQHKECAEPALGLLAEKDSNYCLCRTPCNLT
RYNKELSMVKIPSKTSAKYLEKKFNKSEKYISENILVLDIFFEALNYETIEQKKAYEVAA
LLGDIGGQMGLFIGASILTILELFDYIYELIKEKLLDLLGKEEDEGSHDENVSTCDTMPN
HSETISHTVNVPLQTALGTLEEIAC
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgagccggagcggcggagcccggctgcccgcggccgcgctcaccggcccgggacgcttc
cgcatggcccgcgaggagccggcgccggcggcggtggcggcggccgggcagcccgggggc
gaccggggcggcgtgcgcgagcgggcgctgcaggggccgggggtcgcccgcagggggcgg
ccgtcgctgagccgcgctaaactgcacgggctgcggcacatgtgcgccgggcgcacggcg
gcggggggctccttccagcggcgggcgctgtgggtgctggccttctgcacgtccctcggc
ttgctgctgtcctggtcctcgaaccgcctgctctactggctcagcttcccgtcgcacacg
cgggtgcaccgcgagtggagtcgccagctgcccttccccgccgtcaccgtgtgcaacaac
aaccctctgcgcttcccgcgcctctccaagggggacctctactacgccggccactggctc
gggctgctgctgcccaaccgcaccgcacgcccgctcgtcagcgagctgctgcggggcgac
gagccgcgccgccagtggttccgcaagctggccgacttccgcctcttcctgccgccgcgc
cacttcgagggcatcagcgccgccttcatggaccgcctgggccaccagctcgaggacatg
ctgctctcctgcaagtaccgcggcgagctctgcggcccgcacaacttctcctccgtgttt
acaaaatatggaaagtgttacatgtttaactcaggcgaggatggcaaacctctgctcacc
acagtcaagggcgggacaggcaacgggctggagatcatgctggacattcagcaagatgag
tacctgcccatctggggagagacagaggaaacgacatttgaagcaggagtgaaagttcag
atccacagtcagtctgagccgcctttcatccaagaactgggctttggggtggctccaggg
ttccagactttcgtggccacccaggagcagaggctcacatacctgcccccaccctggggc
gagtgccgatcctcagagatgggactcgacttctttcctgtttacagtatcaccgcctgt
cggattgactgtgagacacgctacattgtggagaactgtaactgccgcatggtccacatg
ccaggggatgccccattctgtactcctgagcagcacaaggagtgcgcagagcctgcccta
ggtctgttggcagagaaggacagtaattactgtctctgcaggacaccctgcaacctgacc
cgctacaacaaagagctctccatggtgaagatccccagcaagacgtcagccaagtacctc
gagaagaaatttaacaaatcagaaaaatatatctcagagaacatccttgtcctggatata
ttttttgaagctctcaattacgagacaattgaacagaagaaggcatatgaagtcgctgcc
ttacttggtgatattggtggtcagatgggattgtttattggtgctagtatccttacaata
ctagagctctttgattatatttatgagctgatcaaagagaagctcttagacttgcttggc
aaagaagaggacgaagggagccacgatgagaacgtgagcacttgcgacacgatgccaaac
cactctgaaaccatcagccacactgtgaatgtgcccctgcagacggccctggggactttg
gaggagattgcttgctga
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