Lutra lutra (Eurasian river otter): 125088103
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Entry
125088103 CDS
T08100
Name
(RefSeq) dynein axonemal intermediate chain 2
KO
K11143
dynein axonemal intermediate chain 2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04814
Motor proteins
llv05014
Amyotrophic lateral sclerosis
llv05016
Huntington disease
llv05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125088103
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125088103
05016 Huntington disease
125088103
05022 Pathways of neurodegeneration - multiple diseases
125088103
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
llv03037
]
125088103
04812 Cytoskeleton proteins [BR:
llv04812
]
125088103
Cilium and associated proteins [BR:
llv03037
]
Motile cilia and associated proteins
Dynein arm
125088103
Cytoskeleton proteins [BR:
llv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
125088103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
125088103
NCBI-ProteinID:
XP_047565087
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Position
16:complement(6703810..6731775)
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AA seq
602 aa
AA seq
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MEIVYVYVKKRSEFGKQCNFSDRQAELNIDIPPNPELAEQFVERNPVDVGVQCSTSMSEH
EANTERFEMETRGINHVEGGWPKDVNPLELEQTIRFRKKVEKDENYINAIMQLGSIMEHC
VKQNNAIDIYQEYFDDEDEVEVTEEAPSAKTINVFRDPQEIKRSATHLSWHPDGNRKLAV
AYSCLNFQRAPEGMSHDSYIWDLENPNRPEIVLKPSSPLVTLEYNPKDSHVLLGGCYNGQ
LACWDTRKGSLVAELSTIEFSHRDPVYGSIWLQSKTGTEFFSASTDGQVMWWDIRKMSEP
TEVVILDITRKERLENALGAISLEFESTLPTKFMVGTEQGIVISCNRKAKTSAEKIVCTF
SGHHGPIYALQRNPFYPKNFLTVGDWTARIWSEDSRESSIMWTKYHMAYLTDGAWSPVRP
AVFFTTKMDGTLDIWDFVFKHCDPALSLKVCDEALFCLRVQDNGCFIACGSQLGTTTLLE
VSSGLCTLQRNEKNIASSIFERETRREKILEARHREMRLKEKGKAEGKDDDQREEETTLN
LEELVTKAEEEFFDIIFTELKQKEVEAIKKKPKPTHQGMEADEEMEGEDQGEEEDNRAET
PA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgtgtacgtgtacgtcaagaagcgaagcgagttcgggaagcaatgcaacttc
tccgaccgccaggccgagctgaacatcgacatcccgcccaaccccgagctggccgaacag
tttgtggagcggaacccggtggacgtgggcgtccagtgctccaccagcatgtcagagcac
gaggccaacacggagcggtttgagatggagacccgggggattaaccacgttgaggggggc
tggcccaaggatgtgaaccccctggagctggagcagacgatccggttccggaagaaggtg
gagaaggatgagaactacatcaacgccatcatgcagctgggttcgatcatggagcattgc
gtcaagcagaataatgccattgacatctaccaggagtattttgatgacgaggacgaagtg
gaggtgacagaggaggccccttcagctaaaaccatcaatgttttcagggacccccaagag
atcaagcggtcagccacacacctctcctggcaccccgatggcaacaggaagttggcggtg
gcatattcttgtttgaattttcagcgggcacctgagggcatgagccacgactcatacatc
tgggacctggaaaaccccaacaggcctgaaattgtcctaaagccatcttctcctcttgtc
accttggagtacaaccccaaagattcccacgtgcttctgggaggctgctacaacgggcaa
ctcgcctgttgggacacccgtaagggcagcttggtggcggagctgtccaccattgagttc
agccatcgagatcctgtgtatggctccatctggctgcaatcaaagacaggaactgagttc
ttctcggcatccacagatgggcaggtcatgtggtgggatatccgaaagatgagcgaaccc
acagaggtggtgatcctggacattaccagaaaggagcggttggagaacgccttgggggcc
atctccttggagttcgagtccactttgccaaccaagttcatggtgggcaccgagcagggc
attgtcatctcctgcaaccgcaaggccaagacatcagccgagaagattgtgtgcaccttc
tcaggccaccatggccccatctatgccctccagagaaatccattctacccgaagaacttc
ctaaccgtcggtgactggaccgcccgcatctggtcagaggacagccgggagtcatccatc
atgtggaccaagtaccacatggcttacctcaccgacggtgcctggagcccagtgaggccg
gcggtcttcttcaccaccaaaatggatgggaccctggacatctgggactttgtgttcaag
cattgtgaccctgccctcagcctgaaggtgtgtgacgaggccctattctgcctccgggtg
caggacaacgggtgtttcattgcctgcggttctcagttaggaaccaccacgctgctggag
gtctccagtgggctgtgcacactgcagaggaacgagaagaacatagcttcttccatattt
gagcgggagacccggcgggagaagattctggaagccaggcaccgggagatgcggctgaag
gagaagggcaaggcggagggcaaggacgatgaccagagagaggaggagacgaccctcaac
ctggaggaactggtcaccaaggccgaggaggagttcttcgacatcatcttcacggagctg
aagcagaaggaggtggaagccatcaagaagaagccaaagcctacccatcagggtatggag
gcagatgaggagatggaaggagaggatcaaggggaggaagaagacaaccgtgccgagact
ccggcctag
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