Lutra lutra (Eurasian river otter): 125088173
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Entry
125088173 CDS
T08100
Name
(RefSeq) nuclear receptor subfamily 1 group D member 1
KO
K03728
nuclear receptor subfamily 1 group D member 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
125088173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125088173
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
llv03310
]
125088173
Transcription factors [BR:
llv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125088173
Nuclear receptors [BR:
llv03310
]
1. Thyroid hormone like
1D. Rev-Erb
125088173
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125088173
NCBI-ProteinID:
XP_047565239
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Position
16:22031527..22039233
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AA seq
613 aa
AA seq
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MTTLDSNNNTGGVITYIGSSGSSPSRTSPESLYSDSSNGSFQSLAQGCSAYFPPSPTGSL
TQDPARSFGSVPPSLSDDGSPSSSSSSSSSSSFYNGNPPGGLQVALEDSSRVSPSKSTSN
ITKLNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKRCLKNENCSIVRIN
RNRCQQCRFKKCLSVGMSRDAVRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLETSP
AQHPTPGPLGPSPPPAQAPSPLVGFSQFPQQLTPPRSPSPEPTVEDVISQVARAHREIFT
YAHDKLGTSPGNFNANHASGSPPATTPHCWESQGCPPVPTDNNIMAAQRHNEALNGLRQA
SSSYPPAWPPGPAHHSCQQPNSNGHRLCPTHVYPAPEGEAPANSPRQGNSKNVLLACPMN
MYPHGRSGRTVQEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLM
VRFASLFNVKDQTVMFLSRTTYSLQELGAMGMGDLLSAMFDFSEKLNSLALTEEELGLFT
AVVLVSADRSGMENSASVEQLQETLLRALRALVLKNRPSETSRFTKLLLKLPDLRTLNNM
HSEKLLSFRVDAQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccctggactccaacaataacacaggtggtgtcatcacctacattggctccagc
ggctcctccccaagccgcaccagccctgagtctctctacagtgacagctcaaatggcagc
ttccagtccctggcgcaaggctgctctgcctacttcccaccgtcgcccacaggctccctc
acccaggacccagctcgctcctttgggagcgttccacccagcttgagtgatgatggctcc
ccttcttcatcttcctcctcatcgtcctcctcctccttctataatgggaacccccccgga
ggtctacaagtggccctggaagatagcagccgcgtgtcccccagcaagagcaccagcaac
atcaccaagctgaatggcatggtgctcctgtgtaaagtgtgtggggacgtcgcctcgggc
ttccactatggtgtgcatgcctgtgagggctgcaagggcttcttccgtcggagcatccag
cagaacatccagtacaaaaggtgtctgaagaatgaaaactgctccattgtccgcatcaac
cgcaaccgctgccagcagtgtcgttttaagaagtgtctctccgtgggcatgtctcgagat
gctgtgcgttttgggcgcatccccaaacgagagaagcagcggatgcttgccgagatgcag
agtgccatgaacttggccaacaaccagttgagcagccagtgcccgttggaaacctcgccg
gcccagcatccgaccccaggccccctgggcccctcaccacctcccgctcaggccccctca
cccttggtgggcttctcccagttcccacaacagctgacgcctccccggtccccaagtcct
gagcccactgtggaggatgtgatatcccaggtggcccgcgcccatcgagaaatcttcacc
tatgcccatgacaagctgggcacctcaccgggcaacttcaatgccaaccatgcgtcgggc
agccctccggccaccaccccacactgctgggagagtcagggctgccccccagtccccact
gacaacaatatcatggctgctcagcgtcataacgaggccctgaacggtttacgccaggct
tcctcctcctaccctcccgcctggccccctggccctgcccaccacagctgccagcagccc
aacagcaatgggcaccgcctctgccccacccatgtgtacccagccccagaaggcgaagca
cctgccaacagtccacggcagggcaactccaagaacgttctgctggcatgtcccatgaac
atgtacccacacggacgcagtgggagaaccgtgcaagagatctgggaggatttctccatg
agcttcacacctgctgtgcgggaggtggtagagtttgccaagcacatccctggcttccgt
gatctttctcagcacgaccaggtcaccttgcttaaggctggcacctttgaggtgttgatg
gtgcgctttgcatcgctgttcaacgtgaaggaccagacagtgatgttcctcagccgcacc
acctatagcctgcaggaactcggagccatgggcatgggcgacctgctcagtgccatgttt
gacttcagcgagaaactcaactccctggcgcttaccgaggaggagctgggcctcttcacc
gcggtggtgctcgtctctgcggaccgctcgggcatggagaattccgcttcggtggagcag
ctccaggagacgctgctgcgggctcttcgggctctggtgctgaagaaccggccctcggag
acttcccgcttcaccaagctgctgctcaagctgccggacctgcggaccctgaacaacatg
cattccgagaagctgctgtccttccgggtggacgcccagtga
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