Lutra lutra (Eurasian river otter): 125088197
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Entry
125088197 CDS
T08100
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125088197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125088197
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
125088197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
125088197
NCBI-ProteinID:
XP_047565292
LinkDB
All DBs
Position
1:218949204..218958436
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AA seq
518 aa
AA seq
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MAALGPSTQNVTEYVVRVPKNTTKKYNIMAFNAADKVNFATWNQARLERDLSNKKIYQEE
EMPESGAGSEFNRKLREEARRKKYGIVLKEFRPEDQPWLLRVNGKSGRKFKGIKKGGVTE
NTSYYIFTQCPDGAFEAFPVHNWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQR
RLKDQDQDEEDEEKEKRSRKKASELRIHDLEDDLEMSSDDSEASGEEGSRASKAKKKAPP
AKGGKKKKKKKGSDDEAFEDSDDGDFEGQEVDYMSDGSSSSQDELEGKPKVTQQEEGPKG
VDEQSESSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKADSSDESDSSEESDIDSEASS
ALFMAKKKTPPKRERRPSGGSSRGDSRPGTPSTESGSTSSTLRAAATKLEQGKRTNDTPV
AKRLRLEPGPQSLSGKSTPQPQSGKSTPSSGDVQVTEDAVRRYLTRKPMTTKDLLKKFQT
KKTGLSSEQTVNVLAQILKRLNPERKMISDKMHFSLKE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctcggccccagcacccagaacgtcaccgagtatgtcgttcgagttcccaaa
aacacaactaaaaaatacaacatcatggccttcaacgcagctgataaagtcaacttcgct
acctggaaccaggcccgactggagcgagacctgagcaacaagaagatttaccaagaggaa
gagatgcctgagtccggcgcgggcagcgagttcaaccgcaagcttcgcgaggaggcgagg
aggaagaagtacggcatcgtcctcaaggagttccggcccgaggaccagccctggctgctc
cgcgtcaatggcaaatcgggcagaaagttcaagggcataaagaagggaggtgtgacagag
aacacgtcctactacatcttcacccagtgccccgacggggccttcgaggccttcccggtg
cacaactggtataacttcacaccgctggcccggcatcgcacgctcactgccgaagaggcc
gaggaggagtgggagaggagaaacaaagtcctgaaccacttcagcatcatgcagcagcgg
cggctcaaggatcaggaccaggacgaggaagacgaggagaaggagaagcgcagccgcaag
aaagccagtgagctgcgcatccacgacctggaggacgacctggagatgtcgtctgacgac
agcgaggccagtggcgaggaaggtagccgagcctccaaggccaagaagaaggcacccccc
gccaaggggggcaagaagaagaagaagaagaaggggtccgacgatgaggcgtttgaagac
agcgacgacggggacttcgagggccaggaggtagactacatgtccgatggctcgagcagc
tcccaggatgagctggagggcaagcccaaggtcacccagcaggaggagggccccaagggc
gtcgacgagcagagcgagagcagcgaggagagtgaggaggagaagccgccagaggaggac
aaggaggaggaggaggagaagaaggcacccacgcctcaggagaagaagcgcaggaaagca
gacagcagcgatgagtcagacagctcggaggagagcgacatcgacagcgaggcttcatcg
gccctcttcatggcgaagaagaagacaccccccaagagggagcgaaggccgtcgggaggc
agctcgcggggcgatagccggccgggcacacccagcacagagagtggcagcacgtcgtca
accttgcgggccgcggccaccaagctggagcagggcaagcggacgaacgacacgccggtg
gccaagcgtttgcggctggagccgggaccccagagcctgtcagggaagtcgacccctcag
ccccagtccgggaagtcaacccccagcagcggggacgtgcaggtgaccgaggacgccgtg
cgccgctacctgacgcgcaagcccatgaccaccaaggacctgctgaagaagttccagacg
aagaagacggggctgagcagcgagcagacggtgaatgtgctcgcccagatcctcaagcgc
ctcaaccccgagcgcaagatgatcagcgacaagatgcacttctccctcaaggagtga
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integrated database retrieval system
