Lutra lutra (Eurasian river otter): 125088588
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Entry
125088588 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: protein strawberry notch homolog 2-like
KO
K26273
protein strawberry notch
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125088588
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125088588
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
125088588
NCBI-ProteinID:
XP_047565745
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All DBs
Position
1:222838026..222884980
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AA seq
1373 aa
AA seq
DB search
MLVVGPAMDGELPQREPPPAGSTLYSPPPLQTPLCGPGVQSAMLHCPWWTAFSPTPYPAF
SSESPQFMSSTSFLAGQPCVDTSYGPPTTTPSFLPKTGDFPQDSAYLDDLSNASIFSSSV
DSLSDIADTPDFLPADSLSQVPTIWDVSTGPAAQEKLLLPTGPWTGLEDPVSSLSSTPLL
VSYQSQSQPEEEDEAEEDEGEELGHTETYADYVPSKSKIGKQHPDRVVETSTLSSVPPPD
ITYALALPASDSGALSALQLEAITYACQQHEVLLPSGQRAGFLIGDGAGVGKGRTVAGII
LENYLRGRKKSLWFSVSNDLKYDAERDLRDIDAPGIAVHALSKIKYGDNTTSEGVLFATY
SALIGESQAGGQHRTRIRQILEWCGEAFDGVIVFDECHKAKNASSTKMGKAVLDLQNKLP
QARVVYASATGASEPRNMIYMSRLGIWGDGTPFRTFEEFLHAIEKRGVGAMEIVAMDMKV
SGRYIARQLSFSGVTFRVEEIPLAPAFERVYNRAALLWAEALGVFQQAADWIGLESRKSL
WGQFWSAHQRFFKYLCVAAKVSRLVGLAREELARDKCVVIGLQSTGEARTREVLDEKDGQ
LDCFVSAAEGVFLSLIQKHFPSTKRKRERGAGSKRKRRPRGRGAKVPRLACEVAGVIRIS
DDSSTESDAGPDSDSHSSPESVLDDDVVILDTVGLPADDRGPLCPLQRDPHGPGVLERVE
QLKQDLLAKVRALGRELPVNTLDELIDQLGGPERVAEMTGRKGRVVSRPDGTVAFESRAE
QGLSIDHVNLREKERFMSGEKLVAIISEASSSGISLQADRRVRNQRRRVHMTLELPWSAD
RAIQQFGRTHRSNQVSAPEYVFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDL
SKYNFENKYGTRALSCVLTTVLSQTENKVPLPQAYPGGDAAFFRDMKQGLLSVGIGGRES
RSGCLDVEKDCSITKFLNRILGLEVHKQNALFQYFSDTFDRLIETDKKEGKYDMGILDLA
PGIDEIYEESQQVFLAPGHPQDGQVVFYKISVDRGLKWDEVYARSLELTGTHDGFYLSKV
RGKPSCLLAEQNRGKHFTVYKPNVGRQSQLETYDSLCRKFRRVTAEEAREHWENSYAFSL
THCSHAAWNRPCRLVQEGKDCTQGLRLRHHYMLCGALLRVWGRIAAVMADVTSSSYLQIV
RLKTKDKKKQVGIKIPEGCVRRVLQELRLMDADVKRKNARARGFPAPLPALRPLALPCGP
GEVLDLTYSPPPQAFPPPSPFAFPPPPPPPDPAPAPGGLPLGAPDTAADPAALAHQGRDI
NFKEVLEDMLRSLNAGPPTGPSGPGAGAAGAPGGAGGPERQSVIQFGPPFPNS
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggtggggcctgccatggacggggagcttccgcagcgcgagccccctccagcg
ggcagcaccctctacagcccgccccccctgcagaccccgctgtgcgggcccggcgtccag
agcgccatgctgcactgcccgtggtggaccgccttctcgcccacgccgtacccagccttc
tccagcgagagcccccagttcatgagctccacctccttcctcgccggccagccctgcgtg
gacaccagctacggaccccccaccaccactcccagcttcctgccaaagacgggcgacttt
cctcaggattccgcgtacctcgacgacctttccaacgcctccatcttctcttcgtccgtg
gactccctctcagacatcgcagacacaccggacttcctgccggccgacagcctcagccag
gtgcccaccatctgggacgtgagcaccggccccgccgctcaggagaagctgctcctgccc
actgggccatggacaggccttgaggaccctgtgtcctccctttccagcaccccacttctt
gtcagctaccagtcccagagtcagcctgaggaggaagacgaggcagaggaggatgagggg
gaggagctgggccacacagagacctacgccgactacgtaccgtccaaatccaagatcggg
aagcagcatccggaccgcgtggtggagaccagcaccctgtccagtgtcccaccgccagac
atcacctacgcccttgccctgcctgcttccgacagcggggccctgtctgccctacagcta
gaggccatcacctatgcctgccagcaacacgaggtcttgctccccagcggccagcgggcc
ggcttcctcatcggcgatggtgcaggcgtgggcaaggggcgcacggtggccggcatcatc
ctggagaattacctgcggggcaggaaaaagtccctgtggttcagcgtctccaatgatctc
aagtatgacgcggagcgggacctgcgggacatcgacgcaccgggcatcgcggtgcacgcg
ctgagcaagatcaagtacggggacaatactacctcagagggcgtcctcttcgccacctac
tctgccctcatcggggagagccaggccggcgggcagcaccgcacgcgcatccgccagatc
ctggagtggtgcggggaggccttcgatggagttattgtgtttgatgagtgccacaaagcc
aagaacgccagctccacgaagatgggcaaggccgtcctggacctgcagaacaagctgccc
caggccagggtggtctatgccagcgccacaggtgcctctgagccccggaacatgatctac
atgagccgcctgggcatctggggtgatggcacgcccttccgaaccttcgaggagtttctg
catgccattgagaagaggggcgtgggcgccatggagatcgtggccatggacatgaaggtc
agcggcaggtacatcgcccggcagctcagcttctccggtgtcaccttccgcgttgaggag
atccccttggccccggcctttgagcgtgtctacaaccgcgcggccctgctgtgggccgaa
gccctgggcgtgttccagcaggcggccgactggatcggcctggagtctcgcaagtccctg
tggggtcagttctggtcggcccatcagcgcttcttcaagtatctgtgcgtcgctgccaag
gtgtcccggctggtggggctggcccgggaggagctggcccgggacaagtgtgtggtcatc
gggttgcagtccacgggcgaggctcggacccgggaggtgctggacgagaaggatgggcag
ctcgactgctttgtctccgctgctgagggtgtctttctgtcgctaattcagaagcacttt
ccttcaaccaaaagaaagagagagagaggagcaggcagtaagagaaaacggcggccacgg
ggtcgcggggccaaggtgcccaggctagcatgcgaggtggcgggcgtgatccgcatcagc
gatgacagcagcacagagtcggacgccggcccggacagcgactcccactcctcccccgag
tccgtgctggacgacgacgtggtcatcttggacactgttgggctgccagccgacgaccgc
gggcctttgtgccccctgcagcgggaccctcacggccccggcgtcctggagcgcgtggag
cagctgaagcaggacctgctggccaaggtgcgggcgctgggccgggagctgcccgtgaac
accctggatgagctcatcgaccagctcgggggccctgagcgcgtggccgagatgactggc
aggaagggccgtgtggtgtccaggcctgacgggacagtggcctttgagtctcgggcagag
caaggcctctccatcgaccacgtgaacctcagggagaaggaacgcttcatgagtggggag
aagcttgtggccatcatctctgaggcctccagctccggcatctccctccaagccgaccgc
cgcgtccggaaccagcggcgccgggtgcacatgacactggagctgccgtggagcgccgac
cgcgccatccagcagttcggccgtacccacaggtccaaccaggtctctgcgcccgagtat
gtcttcctcatctcggagctggctggggagcgcaggtttgcctccatcgtcgccaagcgg
ctagagagcctgggggctctgactcatggggaccggcgtgccacggagtcccgcgacctg
agcaagtacaacttcgaaaacaagtacggcacccgggccctcagctgcgtgctcaccacc
gtcctgagccagactgagaacaaggtgccgctgccccaggcctaccctggaggagatgcc
gcttttttccgggacatgaagcagggcctgctgtccgtcggcattggggggcgtgagtcc
aggtccggctgtctggatgtggagaaggattgctccatcaccaagttcctgaaccgcatt
ctggggctggaggtgcacaagcagaacgcgctcttccagtacttctcggacaccttcgac
cgcctcatcgagacggacaagaaggagggcaaatacgacatgggcatcctggacctggct
ccgggcatcgacgagatctatgaggagagccagcaggttttcctggcccccggacaccca
caggacgggcaggtggtcttctacaagatcagcgtggaccgtggcctcaagtgggacgag
gtttatgccaggtcattggagctgacgggcacccatgacggcttctacctctcgaaggtt
cgaggcaagccgagctgcctcctggccgagcagaaccgcgggaagcacttcacggtgtac
aagcccaatgtgggtcggcagagccagctggagacgtacgacagcctgtgccggaagttc
cgcagggtgacggcggaggaggccagggagcactgggagaacagctacgccttctcgctg
acgcactgcagccacgcggcgtggaaccgcccctgccggctggtgcaggagggcaaggac
tgcacgcagggcctgcggctgcgccaccactacatgctgtgcggggccctgctgcgcgta
tggggccgcatcgccgccgtcatggccgacgtcaccagcagcagctacctgcagatagtg
cgcctcaagaccaaggacaagaagaagcaagtcggcatcaagatccccgagggctgcgtg
cgccgcgtgctgcaggagctgcggctcatggacgcggacgtgaagcgcaagaacgcgcgc
gcccggggcttccccgcgccgctgccagccctgcgcccgctcgcgctgccctgcggcccg
ggcgaggtcctggaccttacctacagcccgccgccgcaggccttcccgccgccctcaccc
tttgccttcccgcccccgcctccgcccccggaccccgcgccagctcccgggggcctgccg
ctgggcgccccggacaccgcggcggaccccgcggccctggcgcaccagggccgcgacatc
aacttcaaggaggtgttggaagacatgctgcgctccctcaacgccgggccgcccaccggt
ccctccgggccgggcgcaggggccgcaggggcgcctgggggggccgggggccccgagcgg
cagagcgtcatccagttcggccccccctttccaaactcctag
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