Lutra lutra (Eurasian river otter): 125088600
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Entry
125088600 CDS
T08100
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125088600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
llv03009
]
125088600
Ribosome biogenesis [BR:
llv03009
]
Eukaryotic type
Pre-60S particles
RNases
125088600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
125088600
NCBI-ProteinID:
XP_047565754
LinkDB
All DBs
Position
1:222338109..222361904
Genome browser
AA seq
1361 aa
AA seq
DB search
MPLTFDLAPGPRVAFQPPELWGVISRLMCSSHASPAPDFDKFLSTGKRLQQSWCAWSKHR
CFGKGGLGQVCLDSFLSSRAAKVLGGSCLQVGCGGPCEAQHLWSWASGHLSLSAESESCE
GAGQGDPVASGPSDPAPLPTHPVWASGFPPPSSGVALPSCGSAHSGRLSRTLNSRDDCPH
FTDEETEAQRWGATLPVSMAGLGYDPYNPELPKPPVQRENGALGRGDEPRSDILELELVN
QAIEAVRSEVELEQRRYQELLETAREHSSAETPAVVPRGPAACLTAGLDEDAFPLSFDYN
PGGRPSLLGPDASYQPSPLAAASEAGSKYSLVSLGQVQGRGGGGGGTLEYVPKAVSQPQR
HGRPVPSSKYVLDDSKPSTDLEYDPLSNFSARLLSRASSKDDRAPKRPRGSRGSEPYTPA
LKKPCDPFAGCDARFSDSDDDAAATPAPVPVTTSPSRAQAGPESKAPGLSGSREGQDAEE
GGPRETKEMAVQYDVEDLGQPPKDPGGMPVAKPSSPARASREPSGSKQGRPKKKKSGAAP
DPGHKDSVRKKDRGRDGERGRPAGKPCADRKGPQAGGPRHRTEPPEGTKKKPSSATPVAS
SGKSRPDRGGVPQLPNRTGGKTASGKLAERKARSLDEGAPRDAPKLQKRALSHADLFGDE
SEDEGPGPAAPPTAPPRLSSISDSDSDSDSSLGGSAAGGPRKRLKAPPPTRPAPASPSSC
SSSSSSSSSSSSGPGGGVDYSALEKEVDFDSDPMEECLRIFNESTSVKTEDRGRLARQTP
TEEKIEDKGHSGLTTLFPGQKRRISHLSKQGKEAEPVRRGPAPPARPPTAQEVCYRRAQQ
AQRDSANWLQATQQPAEKPSSIHISAPGEKRRIAHVPNPRLAAAPTGAKRALAASSSQPP
NGPEPGSQPLKARTLSGMASKTTTTITPKRVAHSPSLQSLKKPIIPKEFGGKVPTVIRQR
YLNLFIEECLKFCSSNQEAIEKALNEEKAAYDRSPSKTIYLNVAVNALKKLRGLGPSSAP
RLTKTIGRRLVSHEMVLGGKLATKTSFSLSRPSSPRVEDLKGAALYGRLKEYLLTEDQLK
ENGYPFPHPERPGGAVIFTAEEKKPKDSSCRICCRCGTEYLVSASGRCVREEECYYHWGR
LRRNRVAGGWETQYTCCSAAIGSTGCQVAKQHVQDGRKENLEGFVKTFDKELSEDAHPGI
FALDCEMSYTTYGLELTRVTVVDTDMHVVYDTFVKPDNEIVDYNTRFSGVTEADLADTSI
SLRDVQAVLLSMFSADTVLIGHSLESDLLALKVIHSTVVDTSVLFPHRLGLPYKRSLRNL
MADYLRQIIQDNVDGHSSSEDASACMHLVIWKTREDAKTKR
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgactttcgacctggccccaggtcctcgagttgccttccagccgcctgaactc
tggggtgtgatttctcgcctcatgtgttcttcccatgcttcccctgctccagattttgac
aagtttctttccactgggaagaggctgcagcagtcctggtgtgcatggtccaagcatagg
tgctttggcaagggtgggctgggccaggtttgcttggactcatttttaagctccagagct
gctaaggtgctgggtgggagctgcctgcaggtgggctgtgggggtccctgtgaggcccag
cacctctggtcttgggccagtgggcacctgagcctttcagcagagtctgagtcctgtgag
ggggctgggcagggggatcctgttgcttccggcccttcagacccagccccactgcccacc
cacccggtgtgggcttcaggattcccacctccaagctcgggtgtggcattgcccagttgt
ggcagtgcacactccggcaggctctctagaactctcaatagtagggatgattgtccccat
tttacagatgaggaaactgaggcccagagatggggagccactctcccggtgagcatggcc
gggctcggttatgatccgtataaccccgagctgcccaagccccccgtgcagagggagaat
ggagcgctgggcaggggggacgagccccgctcggacatcctggaactggagctggtcaac
caggccatcgaggctgtgcgctcggaggtagagctcgagcagcggaggtaccaagagctc
ctggagacggcccgcgagcacagctccgccgagacccccgccgtggtgccccgcggccct
gccgcttgcctcactgccggcctggacgaggacgccttcccactgtcctttgattataac
cctggtggccgccccagcctgttaggccctgacgccagctaccagcccagtcctctggct
gctgccagtgaggccggtagcaagtactcactggtctctctgggtcaggtgcagggccga
ggtggagggggcggtggcaccctggagtacgtccccaaggctgtgagccagccccagaga
cacggccgccccgtccccagcagcaagtacgtgctggacgactccaagccgtccacggac
ctggagtatgacccactgtccaacttctccgcccggctgctcagcagggccagctccaag
gacgacagggcccccaaaaggcccaggggctcccgcggcagcgagccctacacgcctgcc
ctcaagaagccctgcgacccctttgccggctgcgatgccaggttttcagactcggacgac
gacgccgccgcaactccggcccctgtgcctgtcaccaccagcccctcgagagctcaggcg
ggccctgagagcaaggcccctgggctgtcaggctccagggagggccaggatgccgaggag
ggcggcccgcgggagaccaaggagatggcggtgcagtatgacgtggaggacctcgggcag
ccccccaaggaccctggggggatgcctgtggccaagcccagctctccggccagggcctcc
cgggagcccagtggctccaagcagggaagacccaagaagaagaagagtggggcagcgccc
gaccccggccacaaggacagcgtccggaagaaggacaggggcagagatggagagcgcggg
aggccggccgggaagccctgtgcagaccggaagggcccacaggctggcggcccccggcat
aggaccgagccgcccgaagggaccaagaaaaagccatcttcagccaccccagtggccagc
tcagggaaaagccggcctgaccgtgggggtgtcccccagctgccaaacaggactggcggg
aagaccgcgtcaggcaagctggccgagcggaaggcccgctccctggatgagggggccccc
cgggacgccccgaagctgcagaagcgggccctgagccacgcagacctcttcggggacgag
agcgaggatgagggccccggacccgcggcgccccccaccgccccaccccgcctcagctcc
atctccgactcggactcggactccgacagcagcctgggcggctcggccgctgggggcccg
cgcaagcgcctcaaggcccccccacccaccaggcctgcccccgcctctccctcctcgtgc
tcctcctcgtcctcgtcctcgtcctcctcctcctctgggccaggcgggggtgtggactac
tccgccctggagaaggaggtcgactttgactcggaccccatggaggagtgtctgcgcatc
ttcaacgagtccaccagcgtcaagacggaggataggggccggctggcccggcagaccccc
acggaagagaagatcgaagacaaggggcattcggggctgaccactctgttccctgggcag
aagaggagaatttctcatctctccaagcagggcaaggaggcggagcccgtgaggagaggc
ccagctccccctgcccggcctcccaccgcccaggaggtatgctatcggcgggcccagcag
gcccagagggactctgccaactggctccaggctacccagcagccggcagagaagccctcc
tccatccacatctcagcccctggcgagaagaggaggatcgcgcatgtccccaacccccgc
ctggctgccgcccccacaggtgccaagagggccctagccgccagcagcagccagcctccc
aatggccccgagccgggcagccagcccctgaaggcgcgcacgttgtcaggcatggcatcc
aagaccaccaccaccatcacccccaagcgcgtcgcccacagcccatctttacagagttta
aagaagcccattatcccgaaagagtttgggggcaaagtccccacggtcatccgccaacgg
tatctcaacctgttcattgaagagtgcctcaagttttgctcctcgaaccaggaagccata
gagaaggcgctgaacgaggagaaggcggcctacgaccgcagtcccagcaagaccatctac
ctgaacgtggccgtgaacgcgctgaagaagctgcggggcctgggccccagctccgcgccc
cggctcaccaaaaccatcggccggaggcttgtgtcccatgagatggtgctggggggcaag
ttggccaccaagaccagcttctcgctcagccgcccgagcagcccccgagtggaggacctg
aaaggggccgccctgtatggccgcctcaaggagtatctgctcaccgaggaccagctcaaa
gagaacggctaccccttccctcaccccgagcggcctgggggggccgtcatcttcacggcc
gaggagaagaagcccaaggactcgtcctgccggatctgctgccggtgtggcaccgagtac
cttgtgtctgcgtctggccgctgtgtgcgcgaggaggagtgctactaccactgggggcgg
ctccgccggaaccgggtggccggcggctgggagacccaatacacatgctgctcagccgcc
atcggctccactggctgtcaggttgccaagcaacatgtgcaggacggccggaaggagaac
cttgaaggctttgtcaagactttcgataaagaactttcggaagacgctcaccccgggatc
ttcgcccttgactgtgaaatgtcctacaccacgtacggcctggagctgacgcgcgtcaca
gtagtggacacggacatgcacgtggtgtacgacacctttgtcaagccggacaatgagatc
gtggactacaacaccaggttttcaggggtgaccgaggctgaccttgccgacacgagcatc
tcgctccgggacgtccaggccgtcctgctgagcatgttcagtgccgacaccgtcctcatc
ggacacagcctggagagcgacctgctggccctgaaggtcatccacagcactgtggtggac
acgtccgtgctcttcccgcaccgcctgggcctcccgtacaagcgctccctgcggaacctc
atggccgactacctcagacagatcatccaggacaacgtggatgggcacagctccagcgag
gacgccagcgcctgcatgcacctggtcatctggaagacccgagaagacgccaagaccaag
cggtga
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