Lutra lutra (Eurasian river otter): 125088622
Help
Entry
125088622 CDS
T08100
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125088622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125088622
Membrane trafficking [BR:
llv04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
125088622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
KH_GLD-3_1st
CENP-O
Imm5
FerA
Motif
Other DBs
NCBI-GeneID:
125088622
NCBI-ProteinID:
XP_047565778
LinkDB
All DBs
Position
17:36219408..36249087
Genome browser
AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPIEDPD
PEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDRNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLIL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcacctcaggatgagcaggaaaagctcttggatgaagccata
caggctgtgaaggtccaatcattccagatgaagagatgcctggacaaaaacaagcttatg
gatgctctgaaacatgcttctaatatgcttggtgagctccggacttctatgttatcacca
aagagctactatgaactttatatggctatttctgatgaattacactacttggaagtctac
ctgacagatgaatttgctaaaggaagaaaagtggcagatctttatgaacttgtacagtat
gctggaaacattatcccaaggctttatctgttgatcacagttggagttgtatatgtcaag
tcatttcctcagtccaggaaagatattttgaaagatttggtagaaatgtgtcggggtgtg
cagcatcctttgagaggtttatttcttcggaactatcttcttcagtgtaccagaaacatc
ttgcctgatgaaggagagccaacagatgaagaaacaactggcgacataagtgattccatg
gattttgtactacttaactttgcagagatgaacaagctgtgggtgcgaatgcaacatcag
ggacatagccgagatagagagaaaagagaacgagaaagacaagaactgagaattttggtg
ggaacaaatttggtgcgcctcagtcagttggaaggcgtgaatgtggaacgttacaaacag
attgttttgactggcatattggagcaagttgtgaattgtagggatgcattggctcaagaa
tacctcatggagtgtattattcaggttttccctgatgaattccaccttcaaactttgaat
ccttttctccgggcctgtgctgagttacaccaaaatgtaaatgtgaagaacataatcatt
gctttaattgatagattagcgttgtttgcccaccgtgaagatggacctggaatcccagca
gatattaaactttttgacatattttcacagcaggtggctacagtaatacagtctagacaa
gacatgccttcagaggatgttgtatctttacaagtttctctcattaatcttgctatgaag
tgttaccctgatcgtgtggactatgttgataaagttctagaaactacagtggaaatattt
aataagctcaaccttgaacatattgctaccagtagtgcagtttcaaaggagctcaccaga
cttttgaagatacctgttgacacttacaacaatattttaacagtcttgaaattaaaacat
tttcacccactttttgagtactttgactatgagtccagaaagagcatgagttgttacgtg
cttagtaatgttctggattataacacagaaattgtctctcaagaccaggtggattccata
atgaatttggtatccacgttgattcaggaccagccagatcagcccatagaagaccctgat
cctgaagactttgctgatgagcagagccttgtgggcagattcattcatcttctgcggtct
gaggaccccgaccagcagtacttgattttaaacacagcacgaaaacattttggagctggt
ggaaatcagcggattcgcttcacactgccacccttggtatttgcagcttatcagctggcg
tttcgctacaaagagaattctaaagtggatgacaaatgggaaaagaaatgccagaagatt
ttttcatttgctcaccagactattagtgctttgatcaaagcagagctggcagaattaccc
ttaagactttttcttcaaggggctctagctgctggagaaattggttttgaaaatcatgaa
acagtggcatacgaatttatgtcccaggcattttctctgtatgaagatgaaatcagtgat
tccaaagcacagctggctgccatcaccttgatcattggtacttttgagaggatgaagtgc
ttcagtgaagagaatcatgaacctctgaggactcagtgtgcacttgctgcatccaaactt
ctgaagaaacctgaccagggccgagctgtgagcacctgtgcacatctcttctggtctggc
agaaacacagacagaaatggagaggagcttcatggaggcaagagggtaatggaatgcctt
aaaaaagctctgaaaatagcaaatcagtgcatggacccctctttacaagtgcaacttttt
atagaaattctgaacagatatatctatttttatgaaaaggaaaatgatgcggtcacaatt
caggttttgaaccagcttatccaaaagattcgagaagatcttccaaatcttgagtccagt
gaagaaacagagcagattaacaaacattttcataacacactggagcatttgcgtttgagg
cgggaatcaccagaatctgaggggccaatttatgaaggtctcatcctttaa
DBGET
integrated database retrieval system
