Lutra lutra (Eurasian river otter): 125088625
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Entry
125088625 CDS
T08100
Name
(RefSeq) alpha-actinin-4 isoform X1
KO
K05699
actinin alpha 1/4
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04510
Focal adhesion
llv04520
Adherens junction
llv04530
Tight junction
llv04670
Leukocyte transendothelial migration
llv04810
Regulation of actin cytoskeleton
llv05146
Amoebiasis
llv05203
Viral carcinogenesis
llv05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125088625
04520 Adherens junction
125088625
04530 Tight junction
125088625
09142 Cell motility
04810 Regulation of actin cytoskeleton
125088625
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
125088625
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
125088625
09174 Infectious disease: parasitic
05146 Amoebiasis
125088625
09163 Immune disease
05322 Systemic lupus erythematosus
125088625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125088625
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
llv04812
]
125088625
04147 Exosome [BR:
llv04147
]
125088625
Membrane trafficking [BR:
llv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125088625
Cytoskeleton proteins [BR:
llv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125088625
Exosome [BR:
llv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125088625
Exosomal proteins of colorectal cancer cells
125088625
Exosomal proteins of bladder cancer cells
125088625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
125088625
NCBI-ProteinID:
XP_047565780
LinkDB
All DBs
Position
17:45850755..45919945
Genome browser
AA seq
911 aa
AA seq
DB search
MVDYHAANQSYQYGPSSGGNGAGGGGSMGDYMAQEDDWDRDLLLDPAWEKQQRKTFTAWC
NSHLRKAGTQIENIDEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIA
SKGVKLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPY
KNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVTNLNNAFEVAEKYLDIPKM
LDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYER
LASDLLEWIRRTIPWLEDRVPQKTIQEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTL
QTKLRLSNRPAFMPSEGRMVSDINNGWQHLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQ
KASIHEAWTDGKEAMLKHRDYETATLSDIKALIRKHEAFESDLAAHQDRVEQIAAIAQEL
NELDYYDSHNVNTRCQKICDQWDALGSLTQSRREALEKTEKQLETIDQLHLEYAKRAAPF
NNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAES
NHIKLLGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLEEQSKQQSNEHLRRQFASQANI
VGPWIQTKMEEIGRISIEMNGTLEDQLSHLKRYERSIVDYKPNLDLLEQQHQLIQEALIF
DNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMQEFRASFNHFDKD
HGGALGPEEFKACLISLGYDVENDRQGDAEFNRIMSVVDPNHSGLVTFQAFIDFMSRETT
DTDTADQVIASFKVLAGDKNFITAEELRRELPPDQAEYCIARMAPYQGPDAVPGALDYKS
FSTALYGESDL
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggtggactaccacgcggcgaaccagtcttaccagtacggccccagcagcgggggcaat
ggcgccggcggcgggggaagcatgggcgactacatggcccaggaggacgactgggaccgg
gacttgctgctggacccggcctgggagaagcagcagcgtaagacgttcacagcctggtgc
aactcccacttgcggaaggccggcacgcagatcgagaacatcgacgaggactttcgagac
gggctcaagcttatgctccttctggaggtcatttcaggagagcggttacctaagccagag
cggggcaagatgagagtgcacaaaatcaacaatgtgaacaaagccctggacttcatcgcc
agcaaaggggtcaagctggtctccatcggggcagaagagattgtggacggcaatgcaaag
atgactctgggaatgatctggaccatcatcctcaggttcgccatccaggacatctctgtg
gaagagacctccgccaaggaagggctgcttctgtggtgccagcggaagacggccccttat
aagaacgtcaacgtgcagaacttccacatcagctggaaggacggtcttgccttcaatgca
ctgatccaccggcacagaccagagctgatcgagtatgacaagctgagaaaggatgatccc
gtcaccaacctgaacaatgcctttgaagtggctgagaagtatctagacatccccaagatg
ttggatgcggaggacatcgtgaacacggcccggcccgacgagaaggccataatgacctat
gtgtccagcttctaccatgccttttcaggagcgcagaaggctgagaccgctgccaaccgg
atctgcaaggtgctggcggtcaaccaggagaatgagcacctcatggaagattatgagagg
ctggctagtgacctcctggagtggatccggcgtaccatcccctggctggaggaccgggtg
ccgcagaagaccatccaggagatgcagcagaagctggaggacttccgggactaccggcgc
gtccacaagccgcccaaggtgcaggagaagtgccaactggagatcaacttcaacacgctg
cagaccaagctgcggctcagcaaccggcccgccttcatgccctccgagggcaggatggtc
tcggacatcaacaacggctggcaacacttggagcaggctgagaagggctatgaggagtgg
ctgctgaacgagatccgcaggctggagcggctcgaccacctggcagagaagttccggcaa
aaggcctccatccacgaggcctggaccgacgggaaggaggccatgctgaagcaccgggac
tatgagacagccaccctgtcagatatcaaagctctcattcgcaagcatgaggcctttgag
agcgacctggccgcgcaccaggaccgtgtggagcagatcgctgcaattgcccaggagctc
aatgagctggactactacgactcccacaacgtcaacacccgctgccagaagatctgcgac
cagtgggacgcccttggctctctgacccagagtcgcagggaagctctggagaaaacggag
aagcagctggagaccattgaccagctgcacctggagtacgccaagcgggccgcgcccttc
aacaactggatggagagcgccatggaggacctccaggacatgttcatcgtgcacaccatc
gaggagatcgagggcctgatctcagcccatgaccagttcaagtcaacgctgccggatgct
gacagggagcgggaggccatcctggccatccacaaggaggcccagaggatcgccgagagc
aaccacatcaaactattgggcagcaatccctacaccaccgtcaccccgcagatcatcaac
tccaagtgggagaaggtgcagcagctggtgcccaagcgggaccatgcgctcctggaggag
cagagcaagcagcagtccaacgagcacctccgccgccagttcgccagccaggccaacatc
gtggggccctggatccagacaaagatggaggagatcgggcgcatctccatcgagatgaac
gggaccctggaggaccagctgagccacctgaagcggtacgagcgcagcattgtggactac
aagccgaacctcgacctgctagagcagcagcaccagctcatccaggaggccctcatcttc
gacaacaagcacaccaactacaccatggagcacatccgcgtgggctgggagcagctgctc
accaccatcgcccgcaccatcaatgaggtcgagaaccagatcctcacccgtgatgccaag
ggcatcagccaggagcagatgcaggagttccgggcttccttcaaccacttcgacaaggac
cacggtggggcgctggggccagaggagttcaaggcctgcctcatcagcctgggctacgac
gtggagaatgatcggcagggtgatgccgagttcaaccgcatcatgagtgtggttgacccc
aaccacagcggcctcgtgaccttccaggccttcattgacttcatgtcaagggagaccacc
gacacagacactgccgaccaggtcatcgcctccttcaaggtcctggcaggggacaagaac
ttcatcacggctgaggagcttcggagggagctgcccccggaccaggccgagtactgcatc
gctcgcatggcgccctaccagggccctgacgccgtgcccggggccctcgactacaagtcc
ttctcgacagcgctgtatggcgagagtgacctgtga
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integrated database retrieval system