Lutra lutra (Eurasian river otter): 125088689
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Entry
125088689 CDS
T08100
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
llv04040
]
125088689
04091 Lectins [BR:
llv04091
]
125088689
Ion channels [BR:
llv04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125088689
Lectins [BR:
llv04091
]
C-Type lectins
Others
125088689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
SUEL_Lectin
Lectin_C
Ion_trans
REJ
GPS
Motif
Other DBs
NCBI-GeneID:
125088689
NCBI-ProteinID:
XP_047565947
LinkDB
All DBs
Position
17:6818927..6911760
Genome browser
AA seq
2448 aa
AA seq
DB search
MSAVGLVLLGLALRFRATISKPEEGSFCSKSQVAFRDSCYEFVPLGRTFYGAQSWCEEQG
GHLVFIHDEDTQQFLQKHISQDREWWIGLIGNSAQNGTTEGSGSWLDTSNVSYSHWRRGQ
ASPAPNTCGYIQRDASFGWAASDNCTQPFAFICEFGAGQSLACDGLNATMHCGSGEVIQI
QDAFYGRHTPHYCTQGAAGPSEEECSWASVKGEVAGQCQGLQVCQVAADGTYFGDLCPTQ
GSYLWVRYQCQEGLQLMVSNESFIFDNVTISLTWLLSPFIGNLSCIISTGDGHTFDPYYP
LSSSSNIIHQFTAPGEFTVFAECTTTEWHVMAQKHVTIQDKIEQLSVTGCSSLSQSGASP
LCRTVFGDPLWIQVVLDGGTGVTYTVLSGNTSLAEFTTLSGLLPYNLTLDQAAQQRIGPG
MHHLEIRATSNTTTSAPSRNITVHFMEPLSGLQASWGSDHLELGQDLLVNVSLAHGIPEG
LTFEVAGLNATFTHQEESLKGPFGIYHVAVPLEGTFLVTVLVRNAFSNLSLEVGNITVTA
PSSLQEPFGTNAKEKNREKGNVQVYVETGQYVDPFTTVTLGWPDSDKDLRFQWSCGRCWT
QWSYCVERQLLRTDQRELVLPPSCLPPPTSTVTLHLATWRGGELQNREEQCLYVSVPLEL
GPRVSCEKNCGPVNASEDVMLRVTVVDDSSVAMFNWDLEGTSPGKAEPLPAACRFRGFWL
SALTLPQSNTSTQRRNSSLQTWGQATRIRATAVTRHAHGEDTHVISSLPPPAVPTCTITP
EEGTILTSFTIFCNTSSDLGPLEYCFCLESGSCLHCGPEPALPSVYLPLGKVNNDFMLTV
VISVSSLAGDKEQAHAVVKVGLGDTRVENGAFQAAVLENITATLQSEWDPERLFQLARAV
SSVLDQECQGQGCRWLLNMDIRQKVREHVLGSLSAVPPTLGDIHRIQSLAQVLREVTHPT
EELTPKAQREAIWALQHASEALLAVSSKVQPEDQRRQVATKDLFQAVGSVLEASLSFQRP
EEPAEAKGSQMASISQLLRVVEHVQDALLLGTLPGGLPITLANPSISIYTKRIQPRSWRG
SSVHTAAASSATFILPAASYLGSMEESPEPVDIRVMSFPKSPFLAQSHFDVSGTVGGLCL
TSPSGHLIPMKNLSENIEILLPRLSEGHGEPTVLNLTSPEALWVNLTSDGAALGIQLHWR
PDIPLILNLGYGYHPNETSYDARAQLPPVATTDGQSTWILNPEDLHFGEGVYYLTIVPES
DLELTTGRDLTVGITTFLSHCVFWDEVQGTWDNSGCQVGPRTTHSQTHCLCNHLTFFGST
FLVMPNAIDVCQTAELFATFEDNPVVVTTVGCLCVAYVLVVIWARRKDAQDQAKVKVTVL
EDNDPFAQYHYLVTVYTGHRRGAATSSKVTVTLYGLDGESEPHHLSDPDIPVFERGGVDV
FLLSTMFPLGELRSLRLWHDNSGDRPSWYVSRVLVHDLAKDRKWHFLCNSWLSIDVGDCV
LDKVFPVATEQDRKQFRHLFFMKTSTGFQDGHIWYSIFSCAARSNFTRVQRVSCCFSLLL
CTMLTSIMFWGVPKDPAEQKMDLGEIDFTWQEVMIGLESSLLMFPINLLIVQIFRNTCPR
VTKEQNTEKWDRGSPSLASSQQPMENGLLTLEVVTKDMWRLVSSLFKALKVPSPVSGWDS
AAPMDINHLLALVQEVVCLQNMAGPELWEEAKQKENPLMLPLGSLQAKEQMRCLMPEVGP
SDPQKDNVYKQCLYLQLEHMEQELRLVGPCGFPQSQSHARALSQLQMLKGYLGGQLGTPP
SAYASFPMASKRPRGLPWWFVVVGWLLVAVTSGVAAFFTMLYGLHYGRASSLKWLISMAV
SFVESVFVTQPLKVLGFAAFFALVLKRVEDEEEPVASLPGRLSSPDPSALFRARRCSRKN
IYQPPLAADVEKMKTTHLKEQKTFAFIREVLAYLGFLWMLLLVAYGQRDPSTYHFNRHLE
HSFTQGFSAVLSFREFFVWANTTLLSNLYSYYPGFITDGNSKLVGSAQIRQVRVRESSCP
LAPQLQASLDRCHAPYSLDIEDLSDYGEGWNASIPNNSSGFSQAWQYQSQSQRRGCPIWG
KFTVYRGGGYVVPLGTDRKSASRILQYLFDNTWLDRLTRAVFVEFTVYNANVNLFCIITL
TLETSALGTFLTHVNLQSLRLYPFTDGWHPFVVAAEAIYLLFLLYYMVVQGKLMRKQRWC
YFYSKWNLLELTIILASWSALAMFVKRAILAERDLQHYRNHGEEGISFGETAAADAALGY
IIAFLVLLSTVKLWHLLRLNPKMNMITSALRRAWGDISGFIVVILIMLLTYSIASNLIFG
WKLRSYKTLFDAAETMISLQLGIFNYEEVLDYSPVLGSFLIGSCIIFMTFVVLNLFISVI
LVAFNEEQKYDQLSEEGEIADFLLMKILGFLGIKCKREKPGNSSEQPK
NT seq
7347 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtgggcttggtgctcttggggcttgctctgaggtttagggccacaatctct
aagccagaggagggcagcttttgctcgaaaagtcaagtggccttcagagactcttgctat
gaatttgtgcctctcggtcgcaccttctatggtgcccagagctggtgtgaggagcaaggg
ggccatttggtctttattcatgatgaagacacccagcagtttctgcagaagcacatctcc
caggacagggaatggtggattggactcatagggaactcagctcagaatggaaccacagaa
gggtcagggagctggctggacacctcaaatgtgagctacagccactggcgcagaggacag
gcctctcctgctccaaacacctgtggttacatccagagagatgcttcctttgggtgggcg
gcctcagacaactgcacgcagccgttcgccttcatctgcgagtttggtgctggccagagt
ctagcctgtgatggcctcaatgccaccatgcactgcggctcaggggaggtcatccagatc
caggacgccttctacgggcgccacaccccgcattactgcacccagggtgctgcaggcccc
tcggaggaggaatgcagctgggccagcgtcaagggcgaagtggcaggccagtgccagggg
ctgcaagtatgccaggtggcagcagatgggacctactttggagacctgtgccccacccag
ggaagctacctgtgggtgcggtaccagtgccaagaaggcctccagctgatggtgtccaat
gagagtttcatctttgacaatgtcaccatctccctgacatggctcctctctcccttcatt
ggaaatctgtcatgtataatcagtacaggagatggccacactttcgatccctactacccc
ctcagttcatccagcaacatcatccaccagttcacagcccctggggaattcactgtgttt
gctgaatgcacaaccactgagtggcacgtgatggctcagaagcatgtgacaatccaagac
aagatagagcagctcagtgtgactgggtgctccagcctgtcccagtcaggagccagccct
ctttgccgcactgtcttcggggacccattgtggattcaggtggtgcttgatggaggaaca
ggggtgacttacactgtgctgtcaggcaacacaagcctggctgagttcaccacactgagc
ggcctactaccctacaatctgaccctggaccaagcggcccagcaaaggattggccctggg
atgcaccacctggagatccgagccaccagcaacaccaccacctctgcaccctctagaaac
atcacagtccacttcatggagcctctgtcagggttgcaggcctcctggggttctgaccac
ttggagcttggacaagacctactggtcaatgtctcgttggctcatggtatcccagagggg
ctgacctttgaagtggcaggactcaatgcaaccttcacccaccaagaagaaagcctcaag
gggccatttgggatttaccatgtggcagttcctcttgaaggtacctttctggtcactgtg
cttgtgaggaatgctttctcaaacttaagtttggaagtcggaaacatcactgtcacagct
ccttccagtctgcaagaaccatttggaacaaatgccaaggaaaagaatagagagaaaggg
aacgtgcaggtgtacgtggaaactggtcagtatgtggatcctttcacgactgtgactctg
ggctggccagacagtgacaaggatttacgtttccagtggtcatgtggacgctgctggacc
cagtggagttactgtgttgagaggcagctgctccgcacagaccaaagggagctggtgctt
cctccatcctgcctgccaccgcccacctccaccgtcaccctgcacctggccacctggaga
ggcggggagctgcagaaccgggaggagcagtgcctctatgtgtccgtccccctggaactc
gggcctcgagtcagttgtgagaagaactgtggaccagtgaatgccagtgaagacgtcatg
ctcagagtcaccgtggtggacgactcctcagtggccatgttcaactgggacttagagggc
acctctccggggaaggctgagcctctcccggctgcctgcagattccggggattttggctg
agtgctttaaccctccctcagagcaacacctccacacagaggcggaacagctccttgcag
acctggggccaggccacccggatcagagccacagcagtaaccaggcatgcccacggagag
gacacccatgtgatcagctctctgcctccccctgcggtgcccacgtgcaccatcaccccg
gaggagggtaccattctgaccagcttcaccatcttctgcaatacatcttcggacctgggt
cccctggagtactgcttctgcctggagtcaggttcctgtctacactgtggccctgagcct
gcactcccgtctgtttatttgccacttgggaaagtaaacaatgacttcatgctgacagtg
gtcatttctgtctccagtctcgcaggggacaaagagcaggcccacgcagtggtgaaggtg
ggacttggagacacccgtgttgagaacggggcattccaggctgcagtgctggagaacatc
accgccactctgcaaagcgagtgggaccctgagcggctcttccagctggccagagccgtg
tcatccgtgctagaccaggagtgccaggggcagggctgcaggtggctgctgaacatggat
atcagacagaaggttagagagcatgtgctggggtcactgtctgcggtccctcccaccctg
ggggacatacacaggatacaaagcttggcccaggtgctaagagaggtgacccaccccact
gaggagctcacgcccaaggcccagcgggaggccatctgggctctgcagcatgccagtgaa
gccctgttggcagtgagttccaaggtccagcctgaagaccagaggcgccaggtggccacc
aaggacctgtttcaggccgtggggagtgtgctggaagcctccctgagcttccagagacca
gaagagcctgcagaggccaagggcagccagatggcctccatttcccagctgctcagagtt
gtggagcatgtgcaggatgccctccttctggggacactgcctgggggcctcccaatcact
ctggccaacccctccatctccatatacacaaagagaatacagcccaggagttggcgaggc
tcctctgtgcacactgcagctgccagctctgcaacctttatcctgcctgctgcctcctac
cttggctccatggaggagagcccagagcctgtggacatcagggtgatgagtttcccaaag
agccccttcctggcccagagtcactttgatgtcagtggaactgttggtggcctctgcctg
accagccctagtggacatctcatacccatgaagaatctgtcggagaatatcgagatccta
ctgccaaggctttcggaaggacacggtgagccaactgtgttaaacctgaccagtcctgaa
gctttgtgggtgaacctgacttcagatggggcagctttggggatccaactgcactggaga
cctgatatcccactcatactcaacctgggctacggctaccaccccaatgagaccagctat
gacgccagagctcaacttccaccagtggctactacagatgggcagtccacgtggatcctg
aacccagaggacctgcattttggagaaggtgtctactatctgaccattgtccccgagtct
gacctggagctgaccactggcagggacctcacagttggcattaccaccttcctgtcccac
tgtgtgttctgggatgaggtccaggggacttgggacaactctgggtgccaggtggggcca
cggaccacccactcccagacacactgcctctgcaaccacctcaccttctttggaagcacg
ttcctggtgatgcccaatgccattgacgtctgccagaccgccgagctctttgccaccttc
gaggacaaccctgtggttgtgaccaccgtgggctgcctctgtgtggcctacgtgctggtg
gtgatctgggcaaggaggaaggacgctcaggatcaggccaaggtgaaggtcacagtgctg
gaggacaatgatccctttgcccagtaccactacctggtgacagtctatactggacaccgg
agaggggcagctacttcctccaaggtgactgtcaccctatatggcctggatggagagagt
gaaccccaccacctgtcagaccctgacatcccagtttttgagcgaggaggagtggatgtc
ttcttactctccaccatgttccccctgggggaactgaggagcctgcggctgtggcatgac
aactcaggggaccggccatcctggtacgtaagccgggtgctggtgcatgacctggctaag
gaccggaagtggcatttcctctgcaactcgtggctgtccattgatgttggagactgtgtt
cttgacaaagtatttccagtggccacagagcaggacaggaaacaattcaggcacctgttt
ttcatgaagacgtccacgggcttccaggatggacacatctggtattccatcttcagctgc
gcagctcggagcaacttcacccgtgtccagagggtgtcctgctgcttctccctgctcctc
tgcaccatgctgaccagcatcatgttctggggtgttcccaaggatccagctgaacaaaag
atggacttgggtgaaattgatttcacttggcaggaagtgatgattggactggagagctct
ctcctcatgttccccatcaatctcctaatcgttcagatctttcgaaacacctgtcctcgg
gtcactaaggagcagaacactgagaaatgggataggggctcccctagcctggcctcctca
caacagcccatggagaatggccttctgacacttgaagtggtgaccaaggatatgtggaga
ctcgtcagctcgctgtttaaagctctgaaggtgccatcacctgtctccggctgggactca
gcagcaccgatggacatcaatcaccttctggccttggtgcaggaagttgtctgtctgcag
aacatggcagggccagagctctgggaggaagccaaacagaaagagaaccctttaatgctc
cctcttgggtctctacaagcaaaagaacaaatgcgatgcctgatgccagaggtgggccca
agtgaccctcagaaggacaatgtctacaagcagtgtctctaccttcagctggagcacatg
gagcaagagcttcggctggtggggccctgtggcttcccccagagccagagccacgcccgg
gccctcagccagctgcagatgctgaagggctatctggggggacagctgggcaccccacct
tcagcatacgccagcttcccgatggcaagcaagcgtcctcgaggcctgccctggtggttc
gttgtggtgggctggctcctggtggcagtcaccagcggcgtggcagccttctttaccatg
ctctacggcctgcactatgggcgggccagctccctgaagtggctcatctccatggccgtc
tccttcgtggagagtgtgtttgtcacccagcccctgaaggtgctgggctttgctgccttc
tttgcactggtcttgaagagagtagaggatgaggaagagccggtggcctccctcccagga
cgtctatctagcccagacccctctgccttgttccgagcacgacgatgcagcagaaagaac
atttaccagccgcctttggctgctgacgttgagaagatgaaaaccacccatctcaaggaa
cagaagacatttgccttcatcagagaagtcttggcatacctgggcttcctgtggatgctg
ctgctggtcgcctatgggcagagggaccccagcacctaccacttcaacagacaccttgag
cacagcttcacccaaggcttttcagctgtgttaagcttcagagagttcttcgtgtgggcc
aacaccaccctcctgagcaacctatacagttattacccaggctttatcacggatgggaac
tctaagctggtgggcagtgcccagattcgacaagtgagggtccgggaaagctcttgccct
cttgccccacagctgcaggcttctctcgacagatgccatgcaccatactccctggatatt
gaagacctgtcagactatggggaaggctggaatgcctccatacccaataacagcagtggc
ttttcccaggcttggcagtaccagagccagagccaacgccgagggtgtcccatctggggc
aaattcactgtgtaccggggaggaggttatgtggttcccttggggactgatcgcaaaagc
gcatcaagaattctccagtacctctttgacaacacgtggctggacagactgaccagagct
gtttttgtggagttcaccgtctacaatgccaacgttaacctgttctgcatcatcactctg
accctggagacaagcgccctgggaaccttccttacacatgtgaacctgcagagcctgcgc
ctgtaccccttcactgacggctggcaccccttcgtggtagcagcagaagccatctacctt
ctgttcctcctctactacatggttgtgcagggcaagctcatgaggaaacagaggtggtgc
tatttctatagcaagtggaatcttctggagctaaccatcatcctggccagctggagtgcc
ctggcaatgtttgtgaagagggccatcctggcagaacgagacctccagcactaccggaac
catggggaggaggggatcagttttggtgagacagcagcggctgatgctgcccttggctac
atcattgccttcctggtactgctgtccacagtgaagctttggcatctgctcaggttgaac
cccaaaatgaacatgatcacttcagccctgcgccgggcttggggggacatttcaggcttc
atcgttgtcatccttatcatgcttctgacttactccattgcttcaaacttaatatttggt
tggaaactccgttcctacaaaactctctttgatgcagcagaaacgatgatcagccttcag
ctaggaatctttaactatgaggaggtcctggactatagcccagtgcttggctctttcctg
attgggtcttgcatcattttcatgacatttgtggtgctgaatttatttatctctgtcatc
ctggtggccttcaatgaggagcaaaaatatgatcagctgtcagaagaaggagagattgct
gattttttgctgatgaaaatactcggtttcctgggtattaaatgtaaaagagagaagcct
ggaaacagcagtgagcagcccaagtag
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integrated database retrieval system
