KEGG   Lutra lutra (Eurasian river otter): 125088807
Entry
125088807         CDS       T08100                                 
Name
(RefSeq) RNA-binding protein MEX3D-like
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
llv  Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:llv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:llv03019]
    125088807
   04121 Ubiquitin system [BR:llv04121]
    125088807
Enzymes [BR:llv01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     125088807
Messenger RNA biogenesis [BR:llv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     125088807
Ubiquitin system [BR:llv04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    125088807
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 zf-RING_4 zf-C3HC4_2 RING_XB3-XBAT31 zf-C3HC4 KH_DEAH11_2nd
Other DBs
NCBI-GeneID: 125088807
NCBI-ProteinID: XP_047566256
LinkDB
Position
1:222540437..222549076
AA seq 660 aa
MPDSTGQPDGGGGDPSPRPPPPPPPPPLPEGAEEEAAPDDAAAAAALRLALDQLSGLGLG
GAGGPDEEGAVAGGGDGAVAAEAGGADGGAAAEPAPPDGPEAGAPAVAEAVAPGSLALLE
PDVSPPPPPRQSPPDVFAGFAPHPAALGPPTLLAEQMSVIGSRKKSVNMTECVPVPSSEH
VAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKREILSAAEHFSVI
RATRSKAGGLPGTAQGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVTP
GRDKEPVFAVTGMPENVDRAREEIEAHITLRTGAFTDAGPDSDFHANGTDVCLDLLGTAA
GLWAKAPNPGRRPPAPAAGLRGDGALGASGGPEAFYAGGRGGPPVPDAGPASPYGGSGNG
GFTFGGDGPGAPSGPPAPEDCDFGFDFLALDLTVPAAATIWAPFERAAPLPAFSSCSAVN
GAPAPPAPGARRSSGAGTPRHSPTLPEPGGLALELPLARRGAPDPVGALAWRPAQSTLSS
FSCGGAGFPAATSLPSGSSASACPALDSGASEGGRKPPAAAPSAAPTPTPAAPAPASARE
CVVCAEGEVMAALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQAIRVETAARRHLSS
NT seq 1983 nt   +upstreamnt  +downstreamnt
atgcccgactccaccggccagcccgacggcggcggcggcgaccccagcccgcgccccccg
cccccgcccccgccgccgcccctgccagagggcgcagaggaggaggccgcgcccgacgac
gcggccgccgccgccgcgctgcgcctggcgctggaccagctctcggggctggggctgggg
ggcgcaggcggcccggacgaggagggggcggtcgcgggcggcggggacggcgcggtcgcg
gcggaggcgggcggcgcggacggcggggcggcggcggagcccgcgccccccgacgggccg
gaggcgggcgcgcccgcggtggccgaggccgtggcgccgggctcgctggcgctgctggag
cccgacgtgagcccgccgccgccgccccggcagtcgccgcccgacgtgttcgccggcttc
gcgccccaccccgcggccctgggccccccgacgctgctggcggagcagatgagcgtgatc
ggcagccgcaagaagagcgtgaacatgaccgagtgcgtgcccgtgcccagctccgagcac
gtcgccgagatcgtgggtcgccaggggtgcaagatcaaggctctgcgtgcgaagacaaac
acatacatcaagacaccggtgcgcggggaggagccggtgtttattgtgaccggccgcaag
gaggacgtggagatggccaagcgggagatcctgtccgccgccgagcacttctccgtgatc
cgcgccacacgcagcaaggctggcgggctgccgggcaccgcgcaggggccacccaacctg
ccgggacagaccaccatccaggtgcgcgtgccctaccgcgtggtggggctggtggtgggg
cccaagggcgccacgatcaagcgcatccagcagcggacccacacgtacatcgtcacgccc
gggcgcgacaaggagccggtgttcgccgtgacgggcatgcccgagaacgtggaccgcgcg
cgcgaggagatcgaggcgcacatcacgctgcgcaccggcgccttcaccgacgcgggccct
gacagtgacttccacgccaacggcaccgacgtctgtctggacctgctcggaaccgccgcc
ggcctctgggccaaggcccccaacccgggccggcggccccccgcgcctgcagccggcctc
cgcggggacggggccctgggcgcctctgggggccccgaggccttctacgcggggggccgc
ggggggccgccggtgcccgatgcgggccctgccagcccctacggaggatcgggcaatggg
ggcttcacctttggtggggacggcccgggggccccttcggggccgcccgcccccgaggac
tgtgactttggcttcgacttcctggcgctggacctgaccgtgcccgccgccgccaccatc
tgggcgcccttcgagcgagctgcgccgctgcccgccttcagcagctgctcggccgtcaac
ggggcccccgcgccccctgcccccggcgcccggcgcagcagcggggccggcacgccgcgc
cactcgcccacgctgcccgagcccgggggcctggccctggagctcccgctggcccgccgc
ggcgcgcccgacccggtgggcgccctggcctggcggccggcacagagcacgctgtcgtcc
ttctcctgcggcggcgccggcttccccgcggccacttcgctgcccagcggctcctcggcc
tcggcgtgccccgccctggactccggcgcgtccgagggcggccgcaagccccccgcggct
gcaccatcggccgccccgaccccgaccccggccgcgcccgccccggcttcagcgcgggaa
tgcgtggtgtgcgccgaaggcgaggtgatggccgcgctggtcccctgcggccacaacctc
ttctgcatggactgcgccgtccgcatctgcggcaagagcgagcccgagtgcccggcctgc
cgcacgcccgccacccaggccattcgcgtggagacggctgcccggcggcatctcagttcc
taa

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