Lutra lutra (Eurasian river otter): 125088932
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Entry
125088932 CDS
T08100
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04517
IgSF CAM signaling
llv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125088932
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125088932
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
llv04812
]
125088932
Cytoskeleton proteins [BR:
llv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125088932
Intermediate filaments
Intermediate filament-binding proteins
125088932
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
Helical_needle
RASSF_helical
Rv3651-like_N
PH_11
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
125088932
NCBI-ProteinID:
XP_047566506
LinkDB
All DBs
Position
17:46962412..47032978
Genome browser
AA seq
2565 aa
AA seq
DB search
MAQVPGEVDNMEGLPAPNNNNPAARWESPDRGWEREQPAASTAAASLFECSRIKALADER
EAVQKKTFTKWVNSHLARVGCHIVDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHS
LENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET
RSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFSKLIKSNANY
NLQRAFRTAEQHLGLTRLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGK
VLDQVLEVGKIIERYEELAAELLAWIHRTVGLISNQKFANSLSGVQQQLQAFTAYCTLEK
PVKFQEKGNLEVLLFSIQSKLRACNRRLFVPREGCGIWDIDKAWGQLEKAEHEREAALRA
ELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIA
AYEERVQGVAELAHALAAEGYHDARRVEAQRDSVLRQWALLTGLVGARRTRLEQNLALQK
VFQEMVYMVDWMEEMQAQLLSRECGQHLVEAEDLLQKHGLLEGDIAAQSERVEALNAAAL
RFSQLQGYQPCDPQVICNRVNHVHGCLAELRDQAARRRAELEASRSLWALLQELEEAESW
ARDKERLLEAAGGGGGGGVAGAGGTAGGAHDLSSTARLLAQHKILQGELGGRRALLQQAL
RRGEELAAAGGAVGPGAETVHLAGLAERAASARRRWQRLEEAAARRERRLQEARALHQFG
ADLDGLLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGGLRRQLATL
GGASGAGPLVVALQVRVVEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACELWIGE
KEQWLLAMRVPDSLDDVEVVQHRFESLDQEMNSLMGRVLDVNHTVQELVEGGHPSSDEVR
SCQDHLNSRWNRIVELVEQRKEEMSAVLLVENHVLEVAEVRAQVREKRRAVESAPRAGGA
LQWRLSGLEAALQALEPRQAALQEEAALLAVRFPAQAARLHQGAEELGAEWGALASAAQA
CGQAVAAAGRLQRFLHDLDAFLDWLVRAQEAAGGVEGPLPGSLEEADALLARHAALKEEV
DQREEDYARIVAASEALLAADGAELGPGLALDEWLPHLELGWHKLLGLWEARREALVQAH
VYQLFLRDLRQACAVLHNQEMALSGPELPGTVETVEEALKRHRDFLTTMELNQQKMQVAV
QAAEGLLRQGNVYGEQAQEAVTRLLEKSQENQLRAQQWMQKLHDQLGLQHFLRDCHELDG
WIHEKMLMARDGTREDGHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPELAA
SVRKKLGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKKLLHMESQLQDVDPG
GDLATVNSQLKKLQSMESQVEEWYREVGELQAQTAALPLEPASKELVGERQNAVGERLVR
LLEPLQERRRLLLASKELHQVAHDLDDELAWVQERLPLAMQTERGSGLQAVQQYIKKNQG
LRREIQAHGPRLEEVLERAGALASLRSPEAEAVRRGQEQLQGAWAGLREAAERRQQVLDA
AFQVEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQ
LSRQCRALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVGLEQQYWLYQLSRQVDEL
EHWIAEKEVVAGSPELGQDFEHVTVLQEKFSEFANETGTAGRERLAAVNQMVDELIECGH
TAAATMAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLPR
LTAPPEPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIASREQE
VLQGWKELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIASQIGSADKPRDVSSVEV
LMNYHQGLKTELEARVPELTACQELGRSLLLNKSAMADEIQAQLDKLGTRKEEVSDKWDR
HWEWLQQMLEVHQFAQEAVVADAWLTAQEPILQSRELGSSVDEVEQLIRRHEAFRKAAAA
WEERFSSLRRLTTIEKLKAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGGYERGLEP
LARRASDTLSAEVRTRVGYVRQELKPERLQPRIDRLPEIPGRVEPLAPPSVPEDVAETPG
TLPVAEQVRPRPERQESADRAEELPRRRRPERQDTADQSEEASRRRRPERQESAEHEAAH
SLTLGRYEQMERRRERRERRLERQESSEQEMPTRGELAKGKATLADIVEQLQEKEAGPGL
PVGPSLPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSR
SAPAQGGSAPVPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKGELGFYKD
AKGPASGGTHGGEPLLSLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGWL
EAVAASVGEHAEIARWGQTLPTTSSTDEGNPKREAGERRASGRRK
NT seq
7698 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggttccaggggaagtggacaacatggagggcctcccggcccccaacaacaat
aaccctgcagcccgctgggagagtcctgatcgcggctgggagcgggagcaaccagcagcc
tccacagcggccgcatcgctctttgagtgctcccggatcaaggccttggcagatgagcgc
gaggcggtgcagaagaagaccttcaccaagtgggtgaactcgcacctcgcccgagtcggc
tgccacatcgtggacctctacgccgacctccgcgacggctttgtgctcacgcggctcttg
gaagtgctgtccggagagcagctgccaagacccacgcgcggtcgcatgaggatccactcg
ctggaaaacgtggacaaggcgctgcagtttctgaaggagcagcgcgtgcacctggaaaac
gtggggtcgcatgacattgtggatgggaaccaccggctgaccttggggctagtctggacc
atcatcctgcgcttccagattcaggtaatcaaaatcgagactgaggacaacagagagacc
cgctcagccaaggacgccttgctcctgtggtgtcagatgaagacagctggttaccctgag
gttaacatccagaatttcaccaccagctggcgggatggcttggccttcaatgctctcatt
caccggcacaggcccgatctcgtggacttcagcaaactcatcaagtccaacgccaactac
aacctgcagagagccttccgcacggctgagcagcacctggggctgacacgtctgctggac
cctgaggatgtgaacatggaggctcccgatgagaagtccatcatcacctatgtggtctct
ttctaccactatttctccaagatgaaggccctggctgtggaggggaagaggatcgggaag
gtcctggaccaggtgttggaggtggggaagatcattgagcgctatgaggagctggcggct
gagctgctggcctggatccaccgcacagtcggcctcatcagcaaccagaagtttgccaac
tcactgagtggagtgcagcagcagcttcaggctttcacagcctactgcaccctggagaag
ccagtcaagtttcaggagaaggggaacctggaggtgctgctcttcagcatccagagcaaa
ctgcgtgcctgtaatcgtcgcctctttgtgcctcgggagggctgtggcatctgggatatt
gacaaggcatggggccagctggagaaggcagagcacgaacgggaggctgctctgcgggct
gagctgatcaggcaggagaagctggaactactggcccagaggtttgaccacaaggttgct
atgagggagagctggctgaatgagaaccagcgcctggtctcccaggacaacttcgggtat
gagctgccggcggtggaggccgccatgaagaagcacgaggccatcgaggccgacattgcg
gcctatgaggaacgggtgcagggcgtggccgagctggcccacgccctggcggcggaaggc
taccacgacgcccggcgcgtggaggcccagcgtgatagcgtcctgcgtcagtgggccctg
ttgaccgggctggtgggggcccggcggacgcggctcgagcagaacctagccctgcagaag
gtcttccaggagatggtgtatatggtggactggatggaggagatgcaggctcagctgctg
tcccgcgaatgcgggcagcacctggtggaggccgaggacctattgcagaagcatggactg
ctagagggggacatcgcggcccagagcgagcgggtagaggcgctcaacgctgctgccctg
cgcttctctcagctgcagggctaccagccctgcgacccgcaggtcatctgcaaccgcgtg
aaccacgtacatggctgtctggcggagcttcgggaccaggcggcgcgacggcgcgcggag
ctggaggcctcgcggagcctgtgggcgctgctgcaggagctggaggaggcggagagctgg
gcccgcgacaaggagcgcctcctcgaggcagcgggtggcggtggcggcggcggggtagcg
ggcgcggggggcacggcgggcggcgcgcacgacctgtccagcaccgcgcgcctcctagca
cagcacaagattctgcagggcgagctaggcgggcggcgggcgctgctgcagcaggccctg
cggcgcggcgaggagctggctgctgctggcggcgccgtgggcccgggcgccgagacggtg
catctggcgggcctggcggagcgcgcggcgagcgcccggcggcgctggcagcggctggaa
gaggcggcggcccggcgcgagcggcggctgcaggaggcgcgtgcactgcaccagttcggc
gctgaccttgacgggctcctggactggcttcgcgacgcctaccgcctcgctgccgcgggc
gacttcggccacgacgaggcgtccagccgccgcctggcccgtcagcaccgcgcgctcact
ggggaggtggaggcgcatcgcgggcccgtaggtggcctgcggcgtcagttggcgaccctg
gggggagccagcggcgccgggccgctggtggtggcactgcaggtgcgcgtggtggaggcg
gagcagttgttcgccgaggtgaccgaggtggccgcgctgcggcgccagtggctgcgggac
gccctggccgtctaccgtatgtttggcgaagtgcacgcgtgcgagctgtggatcggtgag
aaggagcaatggctgctggccatgcgcgtgcccgattcgctcgacgacgtcgaggtggtg
cagcaccgatttgagagtctggaccaggagatgaacagtctgatgggccgtgtcctggat
gtgaaccacacagtccaggagctggtggaaggaggccaccccagttcagatgaggtgcgc
tcctgccaggaccaccttaacagcaggtggaaccgcatcgtggagctggtggaacagcgc
aaagaggaaatgagcgccgtactgctggtggagaaccacgtgttggaggtggccgaagtg
cgcgcccaggtgcgcgagaagcggagggcggtggagagcgcgcccagagcgggcggcgcc
ctgcagtggcgcctgagcggcctggaggcggccctacaagcgctggagccccgccaggcg
gccctccaggaggaggccgccctgctggccgtgcgcttcccggcccaggcggcgcggctg
caccagggtgcggaagaactgggcgctgagtggggcgcgctggccagcgcggctcaggcg
tgcggccaggcggtggccgcggctgggcgcctgcagcgcttcctgcacgacctggacgct
ttcttggactggctggtgcgcgcccaggaggcggcgggcggcgtcgaggggcccctgccg
ggcagcctggaagaggcggatgcgctgctggctcgccacgctgcactcaaggaggaagtg
gaccagcgcgaggaggactacgcgcgcatcgtggcagccagcgaggcgctgctggcggcg
gatggcgccgagctgggcccgggcctggcgctcgacgagtggctcccacacctggaactt
ggctggcacaagctgctcggcttgtgggaggcacgcagggaggccctggtgcaggcacac
gtctaccagctctttctgcgcgacctgcgccaggcttgcgcggtgctccacaaccaggag
atggcactgtcgggtccagagctcccgggcaccgtggagacagtggaggaggcgctcaag
agacaccgggattttctcaccacgatggagctgaaccagcaaaagatgcaggtggccgtg
caggcggccgagggcctcctgagacagggcaacgtctacggggagcaggcccaggaggct
gtgacccggctgctggagaagagccaagaaaaccaactacgggcccagcaatggatgcag
aagctacacgaccaacttgggctgcagcatttcctccgagactgccacgagctggatggc
tggatccatgagaaaatgctaatggcacgggatggcacgagggaagacggccacaagctg
cataagagatggctccggcaccaggcattcatggccgagctggctcagaataaggagtgg
ctggagaagatcgagagggagggccagcaactgatgcaagagaagccagagctggcggcc
tcggtgcggaaaaagctgggggagatccggcagtgctgggctgaactggagagcaccacc
caggccaaggcgaggcagctctttgaggccagcaaggccgaccagctggtgcagagcttc
gctgagctggacaagaaactccttcacatggagagccagctgcaggacgtggatcctggc
ggggacctggccaccgtcaacagccagctcaagaagctacagtcgatggagtcgcaggtg
gaggagtggtaccgcgaggtgggagagttgcaggcgcagaccgccgccctgccgctggag
ccggccagcaaggagctggtgggcgagcggcagaacgcggtgggcgagcgcctggtgcgc
ctgctcgagcccttgcaggagcgccgccgcctgctgctcgcctctaaggagctgcaccag
gtggcgcacgaccttgacgatgagctggcatgggtccaggagcgactgccactggccatg
cagacggagcgaggcagtggcttacaggctgtccagcagtacatcaaaaagaaccagggc
ctgcggcgagagatccaggcgcacgggccacggctggaggaggtgctggagcgcgcgggc
gcgctggcatcactgcgcagccctgaggcggaggccgtgcgtcgcggccaggagcagctg
cagggcgcctgggccggactgcgggaggcggccgagcggcggcagcaggtgctggacgcc
gccttccaggtggagcagtactacttcgacgtggccgaggtggaggcgtggctgggcgag
caggagctgctcatgatgagtgaggacaagggcaaggacgaacagagcaccctgcagctg
ctcaagaagcacctgcagctggagcagggcgtggagaactacgaggaaagcatcgcgcag
ctgtcgcgccagtgccgggcgctgttggagatggggcacccggacagcgagcagatcagc
cgccggcagtctcaagtggaccgtctgtacgtggcactcaaggagctgggggaggaacgc
agggtgggcctggaacagcagtattggctctaccagctcagccggcaggtggacgagctc
gagcactggatcgcggagaaggaggtggtggccggctcgcccgagcttggccaggacttt
gagcatgtcacggtgctgcaggagaaattctcagagttcgccaatgagacgggcaccgca
gggcgggagcggctggcggccgtgaaccagatggtggatgagctgatcgagtgcggccac
acggcggcagccaccatggccgagtggaaggatgggctgaatgaggcctgggctgagctg
ctggagcttatgggcactcgggcccagctgctggccgcctctcgggagctgcataagttc
ttcagcgatgcccgagagctgcagggacagatcgaggaaaagcggaggcggctgccccgt
ctgactgccccgcctgagccgagacccagtgccagctccatgcagcggaccctgcgtgct
tttgagcatgatctgcagctccttgtgtcccaggtgcggcagctccaagagggggcagcc
cagctgcggacggtgtacgcgggggagcacgcggaggccatagccagccgggaacaggag
gtgctgcagggctggaaggagctgctggccgcctgtgaggacgcccgcctgcatgtcagc
tccacggccgacgccctgcgattccacagccaggcccgtgaccttctttcctggatggac
ggcatcgccagccagatcggatcagccgacaaacccagggatgtgtcttcagtggaggtg
ctcatgaactaccaccagggcctgaagacggagctggaggcccgggtgcccgagctgacg
gcctgccaggagctcgggcgctctctgctgctcaacaagagtgccatggctgatgagatc
caggcacagctggacaagctgggaaccagaaaggaagaggtgtcagacaagtgggaccgc
cattgggaatggctgcagcagatgctggaagtgcaccaatttgcccaggaggccgtggtg
gccgatgcctggctgacagcccaagagccaatcctgcagagccgggagctgggcagcagc
gtggatgaggtggaacagcttatccggagacatgaggccttccgcaaagcagctgccgcc
tgggaagaaaggttcagctccctgcggcgcctgaccacgatagagaaactcaaggcggag
cagagcaagcagccccccacccctctgctggggcgcaagttctttggagaccccacggaa
ctggcggccaaagcagcgcccctcctgcggccagggggctacgagaggggcctggagccc
ctggctcgccgggcctcggacacactgtcggcggaggtgcggacccgcgtggggtacgtg
cgccaggagctcaagcctgagcgcctccagccgcgcatcgaccggctgccggagatcccg
gggagggtggagcccctggccccgccttcggtaccagaggatgtggcagagaccccgggg
accctcccggtggcggagcaggtccggccgcggccagagcgccaggagtcagctgatcgc
gctgaggagctgcccaggaggcggcgaccggagcgacaggacaccgccgatcaatccgag
gaggcttcgcggaggcgtcggccagagcggcaggagtctgcggagcacgaggcggcacac
agcctcactctgggccgctacgagcagatggagcggcggcgcgagcggcgagagaggcgg
ttggagaggcaggagtccagcgagcaggagatgccaaccagaggagagctggccaagggg
aaggccaccctagctgacattgtggagcagctgcaggagaaagaagcaggcccagggctc
cctgttgggccgtcgctgcctcagcctcgcgagcttcccccaggccgcctgcccaacggg
cttgagccgcccgagcggacacctcggccggaccggccgcgggcgcgtgaccggcccaag
ccgcgacggcggccgcggcccagagagggtggtgagggcgggggaagccggcgctcgcgc
tccgccccggcccagggcggctccgcccccgtgcctccgccaccgcccactcacacagta
cagcacgagggcttcctgctgcgcaagcgcgagctcgacgctaaccgcaagtcgtccaac
cggtcgtgggtgagcctgtactgcgtgctcagcaagggggagctgggcttctacaaggac
gccaagggcccggcgtctgggggcacacacggcggggagccactgctcagcctgcacaag
gccaccagtgaggtggctagtgactacaagaaaaagaagcacgtcttcaagctccagacc
caggatggcagtgagtttttgctccaggctaaagatgaggaggagatgaacggctggctg
gaggctgtggccgcttccgtgggagaacacgctgagatcgcccgctggggacagacacta
cccaccacgtcctccacagacgagggcaaccctaagcgagaggcaggggagcgcagggcc
agcggacgccggaagtga
DBGET
integrated database retrieval system
