Lutra lutra (Eurasian river otter): 125088932
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Entry
125088932 CDS
T08100
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125088932
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
llv04812
]
125088932
Cytoskeleton proteins [BR:
llv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125088932
Intermediate filaments
Intermediate filament-binding proteins
125088932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
Motif
Other DBs
NCBI-GeneID:
125088932
NCBI-ProteinID:
XP_047566506
LinkDB
All DBs
Position
17:46962412..47032978
Genome browser
AA seq
2565 aa
AA seq
DB search
MAQVPGEVDNMEGLPAPNNNNPAARWESPDRGWEREQPAASTAAASLFECSRIKALADER
EAVQKKTFTKWVNSHLARVGCHIVDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHS
LENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET
RSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFSKLIKSNANY
NLQRAFRTAEQHLGLTRLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGK
VLDQVLEVGKIIERYEELAAELLAWIHRTVGLISNQKFANSLSGVQQQLQAFTAYCTLEK
PVKFQEKGNLEVLLFSIQSKLRACNRRLFVPREGCGIWDIDKAWGQLEKAEHEREAALRA
ELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIA
AYEERVQGVAELAHALAAEGYHDARRVEAQRDSVLRQWALLTGLVGARRTRLEQNLALQK
VFQEMVYMVDWMEEMQAQLLSRECGQHLVEAEDLLQKHGLLEGDIAAQSERVEALNAAAL
RFSQLQGYQPCDPQVICNRVNHVHGCLAELRDQAARRRAELEASRSLWALLQELEEAESW
ARDKERLLEAAGGGGGGGVAGAGGTAGGAHDLSSTARLLAQHKILQGELGGRRALLQQAL
RRGEELAAAGGAVGPGAETVHLAGLAERAASARRRWQRLEEAAARRERRLQEARALHQFG
ADLDGLLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGGLRRQLATL
GGASGAGPLVVALQVRVVEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACELWIGE
KEQWLLAMRVPDSLDDVEVVQHRFESLDQEMNSLMGRVLDVNHTVQELVEGGHPSSDEVR
SCQDHLNSRWNRIVELVEQRKEEMSAVLLVENHVLEVAEVRAQVREKRRAVESAPRAGGA
LQWRLSGLEAALQALEPRQAALQEEAALLAVRFPAQAARLHQGAEELGAEWGALASAAQA
CGQAVAAAGRLQRFLHDLDAFLDWLVRAQEAAGGVEGPLPGSLEEADALLARHAALKEEV
DQREEDYARIVAASEALLAADGAELGPGLALDEWLPHLELGWHKLLGLWEARREALVQAH
VYQLFLRDLRQACAVLHNQEMALSGPELPGTVETVEEALKRHRDFLTTMELNQQKMQVAV
QAAEGLLRQGNVYGEQAQEAVTRLLEKSQENQLRAQQWMQKLHDQLGLQHFLRDCHELDG
WIHEKMLMARDGTREDGHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPELAA
SVRKKLGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKKLLHMESQLQDVDPG
GDLATVNSQLKKLQSMESQVEEWYREVGELQAQTAALPLEPASKELVGERQNAVGERLVR
LLEPLQERRRLLLASKELHQVAHDLDDELAWVQERLPLAMQTERGSGLQAVQQYIKKNQG
LRREIQAHGPRLEEVLERAGALASLRSPEAEAVRRGQEQLQGAWAGLREAAERRQQVLDA
AFQVEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQ
LSRQCRALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVGLEQQYWLYQLSRQVDEL
EHWIAEKEVVAGSPELGQDFEHVTVLQEKFSEFANETGTAGRERLAAVNQMVDELIECGH
TAAATMAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLPR
LTAPPEPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIASREQE
VLQGWKELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIASQIGSADKPRDVSSVEV
LMNYHQGLKTELEARVPELTACQELGRSLLLNKSAMADEIQAQLDKLGTRKEEVSDKWDR
HWEWLQQMLEVHQFAQEAVVADAWLTAQEPILQSRELGSSVDEVEQLIRRHEAFRKAAAA
WEERFSSLRRLTTIEKLKAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGGYERGLEP
LARRASDTLSAEVRTRVGYVRQELKPERLQPRIDRLPEIPGRVEPLAPPSVPEDVAETPG
TLPVAEQVRPRPERQESADRAEELPRRRRPERQDTADQSEEASRRRRPERQESAEHEAAH
SLTLGRYEQMERRRERRERRLERQESSEQEMPTRGELAKGKATLADIVEQLQEKEAGPGL
PVGPSLPQPRELPPGRLPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSR
SAPAQGGSAPVPPPPPTHTVQHEGFLLRKRELDANRKSSNRSWVSLYCVLSKGELGFYKD
AKGPASGGTHGGEPLLSLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGWL
EAVAASVGEHAEIARWGQTLPTTSSTDEGNPKREAGERRASGRRK
NT seq
7698 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggttccaggggaagtggacaacatggagggcctcccggcccccaacaacaat
aaccctgcagcccgctgggagagtcctgatcgcggctgggagcgggagcaaccagcagcc
tccacagcggccgcatcgctctttgagtgctcccggatcaaggccttggcagatgagcgc
gaggcggtgcagaagaagaccttcaccaagtgggtgaactcgcacctcgcccgagtcggc
tgccacatcgtggacctctacgccgacctccgcgacggctttgtgctcacgcggctcttg
gaagtgctgtccggagagcagctgccaagacccacgcgcggtcgcatgaggatccactcg
ctggaaaacgtggacaaggcgctgcagtttctgaaggagcagcgcgtgcacctggaaaac
gtggggtcgcatgacattgtggatgggaaccaccggctgaccttggggctagtctggacc
atcatcctgcgcttccagattcaggtaatcaaaatcgagactgaggacaacagagagacc
cgctcagccaaggacgccttgctcctgtggtgtcagatgaagacagctggttaccctgag
gttaacatccagaatttcaccaccagctggcgggatggcttggccttcaatgctctcatt
caccggcacaggcccgatctcgtggacttcagcaaactcatcaagtccaacgccaactac
aacctgcagagagccttccgcacggctgagcagcacctggggctgacacgtctgctggac
cctgaggatgtgaacatggaggctcccgatgagaagtccatcatcacctatgtggtctct
ttctaccactatttctccaagatgaaggccctggctgtggaggggaagaggatcgggaag
gtcctggaccaggtgttggaggtggggaagatcattgagcgctatgaggagctggcggct
gagctgctggcctggatccaccgcacagtcggcctcatcagcaaccagaagtttgccaac
tcactgagtggagtgcagcagcagcttcaggctttcacagcctactgcaccctggagaag
ccagtcaagtttcaggagaaggggaacctggaggtgctgctcttcagcatccagagcaaa
ctgcgtgcctgtaatcgtcgcctctttgtgcctcgggagggctgtggcatctgggatatt
gacaaggcatggggccagctggagaaggcagagcacgaacgggaggctgctctgcgggct
gagctgatcaggcaggagaagctggaactactggcccagaggtttgaccacaaggttgct
atgagggagagctggctgaatgagaaccagcgcctggtctcccaggacaacttcgggtat
gagctgccggcggtggaggccgccatgaagaagcacgaggccatcgaggccgacattgcg
gcctatgaggaacgggtgcagggcgtggccgagctggcccacgccctggcggcggaaggc
taccacgacgcccggcgcgtggaggcccagcgtgatagcgtcctgcgtcagtgggccctg
ttgaccgggctggtgggggcccggcggacgcggctcgagcagaacctagccctgcagaag
gtcttccaggagatggtgtatatggtggactggatggaggagatgcaggctcagctgctg
tcccgcgaatgcgggcagcacctggtggaggccgaggacctattgcagaagcatggactg
ctagagggggacatcgcggcccagagcgagcgggtagaggcgctcaacgctgctgccctg
cgcttctctcagctgcagggctaccagccctgcgacccgcaggtcatctgcaaccgcgtg
aaccacgtacatggctgtctggcggagcttcgggaccaggcggcgcgacggcgcgcggag
ctggaggcctcgcggagcctgtgggcgctgctgcaggagctggaggaggcggagagctgg
gcccgcgacaaggagcgcctcctcgaggcagcgggtggcggtggcggcggcggggtagcg
ggcgcggggggcacggcgggcggcgcgcacgacctgtccagcaccgcgcgcctcctagca
cagcacaagattctgcagggcgagctaggcgggcggcgggcgctgctgcagcaggccctg
cggcgcggcgaggagctggctgctgctggcggcgccgtgggcccgggcgccgagacggtg
catctggcgggcctggcggagcgcgcggcgagcgcccggcggcgctggcagcggctggaa
gaggcggcggcccggcgcgagcggcggctgcaggaggcgcgtgcactgcaccagttcggc
gctgaccttgacgggctcctggactggcttcgcgacgcctaccgcctcgctgccgcgggc
gacttcggccacgacgaggcgtccagccgccgcctggcccgtcagcaccgcgcgctcact
ggggaggtggaggcgcatcgcgggcccgtaggtggcctgcggcgtcagttggcgaccctg
gggggagccagcggcgccgggccgctggtggtggcactgcaggtgcgcgtggtggaggcg
gagcagttgttcgccgaggtgaccgaggtggccgcgctgcggcgccagtggctgcgggac
gccctggccgtctaccgtatgtttggcgaagtgcacgcgtgcgagctgtggatcggtgag
aaggagcaatggctgctggccatgcgcgtgcccgattcgctcgacgacgtcgaggtggtg
cagcaccgatttgagagtctggaccaggagatgaacagtctgatgggccgtgtcctggat
gtgaaccacacagtccaggagctggtggaaggaggccaccccagttcagatgaggtgcgc
tcctgccaggaccaccttaacagcaggtggaaccgcatcgtggagctggtggaacagcgc
aaagaggaaatgagcgccgtactgctggtggagaaccacgtgttggaggtggccgaagtg
cgcgcccaggtgcgcgagaagcggagggcggtggagagcgcgcccagagcgggcggcgcc
ctgcagtggcgcctgagcggcctggaggcggccctacaagcgctggagccccgccaggcg
gccctccaggaggaggccgccctgctggccgtgcgcttcccggcccaggcggcgcggctg
caccagggtgcggaagaactgggcgctgagtggggcgcgctggccagcgcggctcaggcg
tgcggccaggcggtggccgcggctgggcgcctgcagcgcttcctgcacgacctggacgct
ttcttggactggctggtgcgcgcccaggaggcggcgggcggcgtcgaggggcccctgccg
ggcagcctggaagaggcggatgcgctgctggctcgccacgctgcactcaaggaggaagtg
gaccagcgcgaggaggactacgcgcgcatcgtggcagccagcgaggcgctgctggcggcg
gatggcgccgagctgggcccgggcctggcgctcgacgagtggctcccacacctggaactt
ggctggcacaagctgctcggcttgtgggaggcacgcagggaggccctggtgcaggcacac
gtctaccagctctttctgcgcgacctgcgccaggcttgcgcggtgctccacaaccaggag
atggcactgtcgggtccagagctcccgggcaccgtggagacagtggaggaggcgctcaag
agacaccgggattttctcaccacgatggagctgaaccagcaaaagatgcaggtggccgtg
caggcggccgagggcctcctgagacagggcaacgtctacggggagcaggcccaggaggct
gtgacccggctgctggagaagagccaagaaaaccaactacgggcccagcaatggatgcag
aagctacacgaccaacttgggctgcagcatttcctccgagactgccacgagctggatggc
tggatccatgagaaaatgctaatggcacgggatggcacgagggaagacggccacaagctg
cataagagatggctccggcaccaggcattcatggccgagctggctcagaataaggagtgg
ctggagaagatcgagagggagggccagcaactgatgcaagagaagccagagctggcggcc
tcggtgcggaaaaagctgggggagatccggcagtgctgggctgaactggagagcaccacc
caggccaaggcgaggcagctctttgaggccagcaaggccgaccagctggtgcagagcttc
gctgagctggacaagaaactccttcacatggagagccagctgcaggacgtggatcctggc
ggggacctggccaccgtcaacagccagctcaagaagctacagtcgatggagtcgcaggtg
gaggagtggtaccgcgaggtgggagagttgcaggcgcagaccgccgccctgccgctggag
ccggccagcaaggagctggtgggcgagcggcagaacgcggtgggcgagcgcctggtgcgc
ctgctcgagcccttgcaggagcgccgccgcctgctgctcgcctctaaggagctgcaccag
gtggcgcacgaccttgacgatgagctggcatgggtccaggagcgactgccactggccatg
cagacggagcgaggcagtggcttacaggctgtccagcagtacatcaaaaagaaccagggc
ctgcggcgagagatccaggcgcacgggccacggctggaggaggtgctggagcgcgcgggc
gcgctggcatcactgcgcagccctgaggcggaggccgtgcgtcgcggccaggagcagctg
cagggcgcctgggccggactgcgggaggcggccgagcggcggcagcaggtgctggacgcc
gccttccaggtggagcagtactacttcgacgtggccgaggtggaggcgtggctgggcgag
caggagctgctcatgatgagtgaggacaagggcaaggacgaacagagcaccctgcagctg
ctcaagaagcacctgcagctggagcagggcgtggagaactacgaggaaagcatcgcgcag
ctgtcgcgccagtgccgggcgctgttggagatggggcacccggacagcgagcagatcagc
cgccggcagtctcaagtggaccgtctgtacgtggcactcaaggagctgggggaggaacgc
agggtgggcctggaacagcagtattggctctaccagctcagccggcaggtggacgagctc
gagcactggatcgcggagaaggaggtggtggccggctcgcccgagcttggccaggacttt
gagcatgtcacggtgctgcaggagaaattctcagagttcgccaatgagacgggcaccgca
gggcgggagcggctggcggccgtgaaccagatggtggatgagctgatcgagtgcggccac
acggcggcagccaccatggccgagtggaaggatgggctgaatgaggcctgggctgagctg
ctggagcttatgggcactcgggcccagctgctggccgcctctcgggagctgcataagttc
ttcagcgatgcccgagagctgcagggacagatcgaggaaaagcggaggcggctgccccgt
ctgactgccccgcctgagccgagacccagtgccagctccatgcagcggaccctgcgtgct
tttgagcatgatctgcagctccttgtgtcccaggtgcggcagctccaagagggggcagcc
cagctgcggacggtgtacgcgggggagcacgcggaggccatagccagccgggaacaggag
gtgctgcagggctggaaggagctgctggccgcctgtgaggacgcccgcctgcatgtcagc
tccacggccgacgccctgcgattccacagccaggcccgtgaccttctttcctggatggac
ggcatcgccagccagatcggatcagccgacaaacccagggatgtgtcttcagtggaggtg
ctcatgaactaccaccagggcctgaagacggagctggaggcccgggtgcccgagctgacg
gcctgccaggagctcgggcgctctctgctgctcaacaagagtgccatggctgatgagatc
caggcacagctggacaagctgggaaccagaaaggaagaggtgtcagacaagtgggaccgc
cattgggaatggctgcagcagatgctggaagtgcaccaatttgcccaggaggccgtggtg
gccgatgcctggctgacagcccaagagccaatcctgcagagccgggagctgggcagcagc
gtggatgaggtggaacagcttatccggagacatgaggccttccgcaaagcagctgccgcc
tgggaagaaaggttcagctccctgcggcgcctgaccacgatagagaaactcaaggcggag
cagagcaagcagccccccacccctctgctggggcgcaagttctttggagaccccacggaa
ctggcggccaaagcagcgcccctcctgcggccagggggctacgagaggggcctggagccc
ctggctcgccgggcctcggacacactgtcggcggaggtgcggacccgcgtggggtacgtg
cgccaggagctcaagcctgagcgcctccagccgcgcatcgaccggctgccggagatcccg
gggagggtggagcccctggccccgccttcggtaccagaggatgtggcagagaccccgggg
accctcccggtggcggagcaggtccggccgcggccagagcgccaggagtcagctgatcgc
gctgaggagctgcccaggaggcggcgaccggagcgacaggacaccgccgatcaatccgag
gaggcttcgcggaggcgtcggccagagcggcaggagtctgcggagcacgaggcggcacac
agcctcactctgggccgctacgagcagatggagcggcggcgcgagcggcgagagaggcgg
ttggagaggcaggagtccagcgagcaggagatgccaaccagaggagagctggccaagggg
aaggccaccctagctgacattgtggagcagctgcaggagaaagaagcaggcccagggctc
cctgttgggccgtcgctgcctcagcctcgcgagcttcccccaggccgcctgcccaacggg
cttgagccgcccgagcggacacctcggccggaccggccgcgggcgcgtgaccggcccaag
ccgcgacggcggccgcggcccagagagggtggtgagggcgggggaagccggcgctcgcgc
tccgccccggcccagggcggctccgcccccgtgcctccgccaccgcccactcacacagta
cagcacgagggcttcctgctgcgcaagcgcgagctcgacgctaaccgcaagtcgtccaac
cggtcgtgggtgagcctgtactgcgtgctcagcaagggggagctgggcttctacaaggac
gccaagggcccggcgtctgggggcacacacggcggggagccactgctcagcctgcacaag
gccaccagtgaggtggctagtgactacaagaaaaagaagcacgtcttcaagctccagacc
caggatggcagtgagtttttgctccaggctaaagatgaggaggagatgaacggctggctg
gaggctgtggccgcttccgtgggagaacacgctgagatcgcccgctggggacagacacta
cccaccacgtcctccacagacgagggcaaccctaagcgagaggcaggggagcgcagggcc
agcggacgccggaagtga
DBGET
integrated database retrieval system
