Lutra lutra (Eurasian river otter): 125088964
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Entry
125088964 CDS
T08100
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04064
NF-kappa B signaling pathway
llv04217
Necroptosis
llv04380
Osteoclast differentiation
llv04622
RIG-I-like receptor signaling pathway
llv04625
C-type lectin receptor signaling pathway
llv04668
TNF signaling pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
125088964
04668 TNF signaling pathway
125088964
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
125088964
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125088964
04625 C-type lectin receptor signaling pathway
125088964
09158 Development and regeneration
04380 Osteoclast differentiation
125088964
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
llv01002
]
125088964
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125088964
Enzymes [BR:
llv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125088964
Peptidases and inhibitors [BR:
llv01002
]
Cysteine peptidases
Family C67
125088964
Ubiquitin system [BR:
llv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125088964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
COX_ARM
Motif
Other DBs
NCBI-GeneID:
125088964
NCBI-ProteinID:
XP_047566579
LinkDB
All DBs
Position
17:complement(32446935..32516919)
Genome browser
AA seq
956 aa
AA seq
DB search
MSSGLWSQEKVTSPYWEERNFYLLLQECSVTDKQTQKLLKVPKGSIGQYIQDRSVGHSRI
PSAKGKKNQIGLKILEQPHAVLFVDEKDVVEINEKFTELLLAITNCEERFSLFKNRSRLS
KGLQIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGI
YQGKQLFQCDEDCGVFVALDKLEILEDDDNGLESDFAGPGDTMQMELPPLEINSRVSLKL
GETIESGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGRFDGVQLCSFASVESTILLHIN
DIIPALSDSVTQERRPPKLAFMSRGVGDKVSSSHNKPKATGSTSDPGNRNRSEFFYTLNG
SSVDSQPQSKSKNTWYIDEVAEDPAKSLTEISPDFGHASPPLQPPSMNSLSTENRFHSLP
FSLTKMPNTNGSIGHSPLSLSVQSVMGELNNAPVQESPPLAMTSGNSHGLEVGSLAEVKE
NPPFYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCR
PDSRFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLEIMIGKKKGIQGHYNS
CYLDSTLFCLFAFSSVLDTVLLRPKEKNDVEYYSETQELLRTEIVNPLRIYGYVCATKIM
KLRKILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFME
KNEKVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKLFKKIFPSLELNITDL
LEDTPRQCRICGGLAMYECRECYDDPDISAGNIKQFCKTCNTQVHLHPKRLNHKYNPVSL
PKDLPDWDWRQGCIPCQKMELFAVLCIETSHYVAFVKYGKDDSAWLFFDSMADRDGGQNG
FNIPQVTPCPEVGEYLKMSPEDLHSLDSRRIQGCARRLLCDAYMCMYQSPTMSLYK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaggcttatggagccaagaaaaagtaacttcaccctactgggaagagcggaat
ttttatttgcttcttcaagaatgcagtgtcacagacaaacaaacacaaaagctccttaag
gtaccaaaggggagtataggacagtatatccaggatcgttctgtggggcactcgaggatt
ccttctgcaaaaggcaagaaaaatcagattggattaaaaattttagagcaaccacacgca
gttctctttgttgatgaaaaggatgtcgtagaaataaatgaaaagttcacagagttgctt
ttggcaattaccaattgtgaagagaggttcagcctgtttaagaacagaagcagactaagt
aaaggcctccagatagatgtgggctgccctgtgaaagtacagctgagatctggggaagaa
aaatttcctggagttgtgcgcttcagaggacccttattagcagagaggacagtgtcggga
atattctttggagtagaattactggaagaaggtcgtggccaaggtttcactgatgggata
tatcaagggaaacagctttttcagtgtgatgaagactgtggcgtatttgttgcgttggac
aagctagaaatcctagaagatgatgacaatggattggaaagtgattttgcaggtccaggg
gacacaatgcagatggaacttccccctctggaaataaactccagagtttctttgaagctt
ggagaaactatagagtctggcacagttatattctgtgatgtcttgccaggaaaagaaagc
ttaggatattttgttggtgtggacatggataatcctattggcaattgggatggcagattt
gatggagtacagctttgtagttttgcaagtgttgaaagtacaattctcttgcacatcaat
gatattatcccagctttatcagatagcgtgacacaggaaaggaggcctcccaaacttgcc
tttatgtcaagaggtgttggggacaaagtttcatccagtcataataaaccaaaggccaca
ggatctacctcagaccctggaaatagaaacagatctgaattcttttatactttaaatgga
tcttctgttgactcacaaccacaatccaaatcaaaaaacacatggtacattgatgaagtt
gctgaggaccctgcaaaatcgcttacagagatatctccagactttggacacgcttcacca
ccactgcagcctccttctatgaactcattatccaccgagaacagatttcactctttacca
ttcagtctgacaaagatgcccaataccaatggaagtattggccatagtccactctcactg
tcagttcagtccgtgatgggagagctaaacaatgcacctgtccaggagagtccacccttg
gccatgacttctgggaactctcatggtctggaagtgggctctctggctgaagttaaagag
aatcctcctttctatggggtaatccgttggattggtcagccgccaggactcaacgaagtg
ctagctggactggaactggaagatgaatgtgcgggctgtacggatggaaccttcaggggc
actcggtacttcacctgtgccctgaagaaggcgctgtttgttaaattaaagagctgcagg
cccgactctaggttcgcgtctctgcagccagtctccaatcagatcgagcgctgtaactct
ctagcatttggaggctacttgagtgaagtagtggaagaaaataccccacccaaaatggaa
aaagaaggtttagagataatgattggaaagaagaagggtatccagggtcattacaattct
tgttacttagactcaaccttattctgcttgtttgcttttagttctgttctggacactgtg
ttacttagacctaaagaaaagaatgatgtagaatattatagtgaaactcaggagctactg
aggacagaaattgttaatcctctgagaatatacggatatgtgtgtgcaacaaagattatg
aaactgaggaaaatacttgaaaaagttgaggctgcatcaggatttacctccgaagaaaaa
gatcctgaagaattcttgaatatcctgtttcatcatattttaagggtagagccattgtta
aaaataagatcagcaggtcaaaaagtacaagattgttacttctatcaaatttttatggaa
aaaaatgagaaagttggagttcctacaattcagcaattattagaatggtcttttatcaac
agtaacctgaaatttgcagaggcaccatcatgtctgattattcagatgcctcgatttgga
aaagattttaaactgtttaaaaaaatttttccttctctggagttaaatataacagattta
cttgaggacacccccaggcagtgccggatatgtggggggctcgccatgtatgagtgtaga
gagtgttacgacgaccctgacatctccgccggaaacatcaagcagttctgtaaaacctgc
aacactcaagtccaccttcaccccaagagactaaaccacaaatataacccggtgtcactt
cccaaagatttacctgactgggactggaggcagggctgcatcccctgccagaagatggaa
ttgtttgctgttctctgcatagagacgagccactatgtcgcctttgtgaagtacgggaag
gacgactcggcctggctcttctttgacagcatggctgatcgggatggtggccagaacggc
ttcaacattcctcaagtcaccccgtgcccagaagtgggggagtacctgaaaatgtctccc
gaggacctgcactctctggactccagaaggatccaaggctgtgcacgaagacttctctgt
gacgcgtacatgtgcatgtaccagagcccgaccatgagtctgtacaagtaa
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