Lutra lutra (Eurasian river otter): 125088972
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Entry
125088972 CDS
T08100
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125088972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125088972
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125088972
mRNA degradation factors
5'-3' decay
Decapping complex
125088972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
DUF445
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_HPS5
WD40_Prp19
WDR55
Motif
Other DBs
NCBI-GeneID:
125088972
NCBI-ProteinID:
XP_047566607
LinkDB
All DBs
Position
17:complement(17926823..17938394)
Genome browser
AA seq
1438 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAESQRPSNAYNGDLNGLLVPDPLCSGDST
SANKPGLRAMPPINLQEKQVICLTGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSV
ADLAFAHLNSSQLACLDEAGNLFVWRLALVNGKIQEEILVHIQQPEGTPLNHFRRIIWCP
FIPEESEDCCEEGSPTVALLHEDRAEVWDLDMLRSNHSTWPVRVSQIKQGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRSLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHT
AHEDFAFGESRPELGSEGLGSSTQGSQPDPRRIVELPAPADFLSLSSETKPKLMTPDAFM
TPSTSLQQITVSPSSSSSSSSSSSSSSSLTAVSAMSSTSAVDPSLPRPPEELTLSPKLQL
DGSLTMSSSSSLQASPRSLLPSLLPGPADKLTPKAPGQVPAAASALSLELQEVEPLGLPQ
ASPSRTRSPDVISSASTALSQDIPEIASEALSRGFVSSAPEGLEPDSMASAASALHLLSP
RPRPGPELGSQLGLDGGPGDGDRHSTPSLLEAALTQEATAPDNQVWPTAPDITRETCSSL
AESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAAGGFGTKVPT
PRLPAKDWKTKGSPRASPKLKRKGKKDDGDSAVGSRLMEHQVADPPEDWPALIWQQQREL
AELRHSQEELLQRLCTQLEGLQSAVTGHVERALESRHEQERILMGHGSVWQRGGDSSSIL
GPGMDAGPAPGLFLSCSAERRLERALAEGQQRGGQLQEQLTQQLSQALSSAVAGRLERSI
RDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVEGSMKENISKLLKSKNLTDAIARAAA
DTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGTQEYLQQLESHMKSRKARE
QEAREPVLAQLRGLVSTLQGATEQMAATVSSSVRAEVQHQLHVAVGSLQESILAQVQRIV
KGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPAAHLDCQAQQAHILQLLQQGHLNQAFQQ
ALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVLLSLIQQLASDLGTRTDLKLSYLEEA
VMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNSLGKVARRLSLMLHGLVTPSLP
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggcccgcggggggtcccagtgcagagagtcagcgcccatctaatgcc
tacaatggggatctcaacgggcttcttgtcccagaccccctctgctcaggtgatagtact
tcagcaaacaagcctggtctccgtgccatgccacctattaaccttcaggaaaagcaggtc
atctgcctcacaggagatgacagctctacatgcatcgggattttggccaaggaggtggag
attgtggccagcagtgactctagcatctcaagcaaagcacggggtagcaacaaggtgaaa
atccagcctgtggccaagtatgactgggaacagaaatactactatggcaaccttattgct
gtgtccaactccttcttggcctatgccattcgggctgccaacaatggctcggcgatggtg
cgggtgatcagtgtcagcacttcagagcggaccctgctcaagggcttcacaggcagtgtg
gctgatttggcctttgcacacctcaattcctcccagctggcctgcctggatgaggcaggc
aacctgttcgtgtggcgcttggctctggttaatggcaaaattcaagaagagatcttggtc
cacatccagcagccagagggcacaccactgaaccacttccgcaggatcatctggtgcccc
ttcatcccagaggagagtgaggactgctgtgaggagggcagccctacggtggctctgttg
catgaggaccgggctgaggtgtgggatctggacatgctccgctccaaccacagcacttgg
cccgtgcgtgtcagccagatcaagcaaggcttcatcgtggtaaaaggccacagcacttgc
ctgagtgaaggggccctctcacctgatgggactgtcctggctactgcaagccatgatggc
tttgtcaagttctggcagatctacatcgaggggcaggatgagccaaggtgtctgcatgag
tggaagcctcatgatgggcggtccctttcctgcctcctgttctgtgacaaccacaagaaa
caggaccctgaagtccctttctggaggttcctcatcactggtgctgaccagaatcgggag
ctaaagatgtggtgcacggtgtcctggacctgcctgcagaccattcgcttctccccagat
atcttcagctcagtgagtgtgccccccagcctcaaggtttgtctggacctgtcagccgaa
taccttattctcagcgatgtgcaacggaaggtcctgtacgtgatggagctgctacagaac
caggaggagggccgtgcctgcttcagctccatctctgagttcctgctcacccaccccgtg
ctgagcttcggtatccaggttgtgagtcgctgccgactgcggcacactgaggtgctgcct
gccgaggaggagaacgacagcctaggggctgatgggacccacggagctggtgccatggag
tctgcagccggtgtgctcatcaaactcttctgtgtgcatactaaggcactgcaggatgtg
cagatccgtttccagccgcagttgaaccctgatgtggtggccccactccccacccacact
gcccatgaggacttcgcatttggagagtctcggcctgaactgggctctgagggcctgggg
tcatctacccaaggatcccagcctgacccccgacgcatagtggagctgcctgcgccagcc
gacttcctcagtctgagcagtgagaccaagcccaagctgatgacacctgacgccttcatg
acacctagcacctccctgcagcagatcactgtgtcccccagcagcagcagcagcagctcc
agctccagctccagctcctcctctcttacagctgtgtctgccatgagcagtacatcagct
gtggatccctccttgcccaggccacctgaggagctgaccttgagccccaagttgcagctg
gacggcagtctgaccatgagcagcagcagcagcctgcaggcaagcccacgcagcctcttg
cccagcctgctcccaggtccagctgacaaactgactcccaaagcacctgggcaggtgcct
gctgctgcttctgcactgtcactggagctgcaggaagtggaacccctggggctaccccag
gcttctcccagccgcacccgctcccctgatgttatttcctcagcttccactgccctgtcc
caggatatccctgagatcgcatccgaggccctgtcccgtggttttgtctcttctgctcct
gagggtcttgaaccagacagtatggcctcagctgcctcagcactccacctgctgtcccca
cggccccggccagggcctgagcttggctcccagcttggcctggatggaggccctggggat
ggggatcggcatagtaccccttcccttttggaggcagcattgacccaggaggccacagcc
cctgacaatcaggtttggcctacggcaccagacataactcgtgagacctgcagcagcctg
gcagagagtcccaggaacggcctccaggagaagcacaagagcctggccttccaccgacca
ccttatcacctgctgcagcaacatgacagccaggacgccagtgctgagcaaagtgaccat
gatgatgaggttgctagccttgcctctgctgcagggggctttggcaccaaagttcccact
ccacggctaccggccaaggactggaagaccaagggttctcctcgagcctcacctaagctt
aagagaaagggcaagaaagatgacggggattcagctgtgggatcccggctcatggagcac
caggtggcagaccctcctgaggactggccagcactaatttggcaacagcagagagagttg
gcggagctgcgacacagccaagaagagttgctgcagcgtctttgcacccagctggaaggc
ctgcagagcgctgtcacgggccacgtagaacgcgccctggagtcgcggcatgagcaggag
cgtatccttatgggtcatggctcagtgtggcagaggggtggggacagcagcagcattctt
ggcccaggaatggatgcgggacctgccccaggcctgttccttagctgcagtgcagagcgg
cggctggagcgggcgctggctgaggggcagcagcggggtgggcagctgcaggagcagctg
acacagcagctgtcccaggcgctgtcttcagccgtagctgggcggctggagcgcagcata
cgggatgagatcaagaagacagtgcccccgtgtgtctccaggagtctggagccagtggca
ggccagctgagcaactcagtggccaccaagctcactgccgtggagggtagcatgaaagag
aatatctccaagctgctgaagtccaagaacttgacagatgccattgcccgagcagctgca
gacacattacaggggccaatgcaggctgcctaccgtgaagcctttcagagtgtggtgctg
ccggcgtttgagaagagctgccaggccatgttccagcagatcaatgatagcttccgactg
ggcacgcaagagtacttgcagcagctggagagccacatgaagagccggaaggcacgagaa
caggaggcacgggagcctgtgttggcccagctgcggggcctagtcagcacactgcagggt
gccaccgagcagatggcggccaccgtgtctagcagcgttcgggctgaggtgcagcaccag
ctgcacgtggctgtgggcagcctacaggagtccattttagcacaggtacagcgcattgtt
aagggtgaggtgagtgtagcactcaaggagcaacaggctgccgtcacgtctagcatcatg
caggccatgcgttccgctgctggcacacccgtccccgccgcccacctcgattgccaggcc
cagcaagcccatatcctgcagctgctgcagcagggccacctcaatcaggccttccagcag
gccctgacagctgctgacctgaacctggtgctgtatgtgtgtgaaactgtggacccaggg
caggtttttgggcagccaccctgcccactctcccagcctgtgctcctttccctcatccag
cagctggcctctgaccttggtactcgaactgatctcaagctcagctacctggaagaggct
gtgatgcacctggaccacagtgaccccattactcgggaccacatgggctctgtcatggcc
caggtgcgccagaagctcttccagttccttcaggctgagccacacaactcacttggtaaa
gtggcccggcgtctcagcctcatgctgcacggccttgtaacccctagcctcccttag
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