Lutra lutra (Eurasian river otter): 125089037
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Entry
125089037 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: transcription intermediary factor 1-beta-like
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
llv01001
]
125089037
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125089037
Enzymes [BR:
llv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125089037
Protein kinases [BR:
llv01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
125089037
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125089037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
PHD_2
PHD-1st_NSD
zf-C3HC4
YaaC
Motif
Other DBs
NCBI-GeneID:
125089037
NCBI-ProteinID:
XP_047566787
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All DBs
Position
17:60195107..60201360
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AA seq
833 aa
AA seq
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MAASAAAASAAAAAAASGSPGPGEGSAGGEKRAAASSAASAASASASASSPAGGGGEALE
LLEHCGVCRERLRPEREPRLLPCLHSACSACLGPPAPAAANSSGDGGAAGDGAVVDCPVC
KQQCFSKDIVENYFMRDSGSKASADSQDANQCCTSCEDNAPATSYCVECSEPLCETCVEA
HQRVKYTKDHTVRSTGPAKSRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKDH
QYQFLEDAVRNQRKLLASLVKRLGDKHATLQKNTKEVRSSIRQVSDVQKRVQVDVKMAIL
QIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNTA
LLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGTNSTGP
TSMAPPRAPGPLSKQGSGSSQPMEVQEGYGFGSDDPYSSAEPHVSGVKRSRSGEGEVSGL
MRKVPRVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLIVIERGAAAAAAGQPGTAPPGA
PGAPPLPGMAIVKEEETEAAIGAPPTATEGPETKPVLMALAEGPGAEGPRLASPSGSTSS
GLEVVAPEGTSAPAGGPGALDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPG
EEWSCSLCHVLPDLKEEDGSLSLDGGDSTGVVAKLSPANQSRERVLLALFCHEPCRPLHQ
LATDSTFSLDQPGGTLDLTLIRARLQEKLSPPYSSPQEFXQDGGRMFKQFNKLTEDKADV
QSIIGLQRFFETRMNEAFGDTKFSAVLVEPPPLSLPGASLSAQELSSGPGDGP
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcggcggcctccgcggcggcggcggcggccgcctccggcagccca
ggcccaggcgagggttcggctggcggcgaaaagcgcgccgctgcttcgtcggccgcgtct
gcggcctcagcctcggcctcggcgtcgtcacccgcggggggcggcggcgaggctctggag
ctgctggagcactgcggtgtgtgccgggagcgcctgcgcccggagagggagcctcgcttg
ttgccctgcttgcactcggcttgcagtgcctgcctcgggcccccggcgcccgctgccgcc
aacagctcgggggatggcggtgcggcgggcgacggcgccgtggtggactgtcctgtttgc
aagcagcagtgcttctccaaagacattgtggagaactactttatgcgtgatagtggcagt
aaggcttccgcagactcgcaggacgcaaatcagtgctgcactagctgtgaggataatgct
cctgccaccagctactgtgtggagtgctctgagccgctgtgtgagacgtgtgtggaggca
caccagcgggtgaagtacaccaaggaccacaccgtgcgctctactgggccagccaagtca
cgggacggtgagcgcacagtgtactgcaatgtgcacaagcacgagccccttgtgttgttc
tgcgagagctgtgacaccctcacctgccgggactgccagctcaatgcccataaggaccac
caataccagttcctggaagatgcagtgaggaaccagcgcaagctcctggcctcgctggtg
aagcgcctcggggacaagcatgcaacgctgcagaagaataccaaggaggttcgcagctcg
atccgccaagtgtctgacgtacagaagcgtgtgcaggtagatgttaagatggccatcttg
cagatcatgaaggaactgaacaagcggggccgtgtgctggtcaatgatgcccagaaggtg
actgaagggcagcaggagcgcctggagcgacaacactggaccatgaccaagatccagaag
caccaggaacacatcctgcgctttgcctcctgggctctggagagtgacaacaacacggcc
ctgctgctctccaagaagctgatctacttccagctgcatcgggccctcaagatgattgtg
gaccctgtggagccacatggcgagatgaagttccaatgggaccttaatgcctggaccaag
agtgcagaggcttttgggaagattgtggctgagcgtcctggcaccaactcaacaggccct
acatccatggcccctcctagggctccagggcccttgagcaaacagggctctggcagtagc
cagcccatggaggtgcaggaaggctatggctttggctcagacgatccttactcaagtgca
gagccgcatgtgtcaggtgtgaagcggtcccgctcaggtgagggcgaggtgagtggcctc
atgcgcaaggtgccacgggtaagcctcgagcgcttggacctggatctcacagctgatagt
cagccaccagttttcaaggtcttcccaggcagcaccactgaggattacaatctcatcgtt
attgagcgtggtgcggcagctgctgctgctggacagcctgggactgctccacctggggcc
cctggtgccccgccactgcctggcatggcaatagtcaaggaggaagagacagaggctgct
attggagccccgcctactgccactgagggccctgagaccaagcctgtgctgatggccctg
gcggagggccccggcgctgaaggcccccgcctggcctcacccagtggcagcaccagttca
ggtctagaagtggtggctccagagggcacttcagccccagcaggtggcccaggtgccctg
gacgacagtgccaccatctgccgtgtctgccagaagccaggcgatctggttatgtgcaac
cagtgcgagttctgcttccacctggactgccacctgcctgccctgcaggatgtgccaggg
gaggagtggagttgctctctgtgccatgtgctgcccgatctgaaagaggaagatggcagc
ctgagcctggatggtggtgatagcaccggtgtggtggccaagctttcgccagccaaccaa
agtcgtgagcgtgttttgctggctctgttctgtcatgagccctgccggcccctgcaccag
ctggctactgactccactttctccctggatcagcctggtggcaccctggacctaaccctg
atccgcgcccgtctccaggagaagttgtcacccccctatagttccccccaggaatttngc
caggatgggggccgcatgtttaagcaattcaataagctgacagaggacaaggcagacgtg
cagtccatcatcggcctgcagcgcttctttgaaactcgcatgaacgaggcctttggtgac
accaagttctcagctgtgctggtggagcccccgccgctgagcctgcctggtgctagcctg
agtgcccaggagctatccagtggtcctggtgatggtccctga
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