Lutra lutra (Eurasian river otter): 125089097
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Entry
125089097 CDS
T08100
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
125089097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125089097
Transcription factors [BR:
llv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
125089097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
125089097
NCBI-ProteinID:
XP_047566898
LinkDB
All DBs
Position
17:complement(47836509..47863185)
Genome browser
AA seq
2523 aa
AA seq
DB search
MKPMKKACVSLPGSGSGGKSPPATRAKALRRRGAGEGEKPEEEDEEVQQQQPQQPPGPEE
AEEGEEEESERGPGAEGLTLEPHPDDPAAPGPAEDPKVEGEASRWEPSLSRKTATFKSRA
PKKKYVEEHGAGSGSSGPAGAPEERARTPEEAGALGVPPRPPTSTRSSSTDTASEHSADL
EDEPAEACGPGPWPPSGTSGGYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFP
GDRALTFYEGAPGSGVDVVLDATPPPGALAVGTAVCTCVEPGVAAYREGVVVEVATKPAA
YKVRLSPGPSSQPGPLAAVPQPPQLPHHEPEEAVWVARSSLRLLRPPWEPEALPRKPPAG
PEEEQAEPGGALPPCPAALDPKQPEDAEVSKISFGGNLGTCEEGEEKHPPALGTPALLPL
PPPQLLSPPPKSPAFVGPGRPGEQPSPCQEGSQGGSRSSSVASLEKGAAPAARARTPLTA
AQQKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLA
DSGPAGAGRPAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDE
CEAAVMLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRT
AVRSRHLSASTPKGGVLTPPDLGPHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKT
ELLPHPGALGAPGAGGGGANPDFPKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRS
RQPSPLLLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEVSTAGEARA
AGPGRGCRETPVPPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQPV
AFHPSPAALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPS
QPDPSVQPSEAQQPASHPVASTQSKEPAESAAVAHEQPPGGTGNADPGRPPGATCPESPG
PGPPHTLGVVEPGKGPPPTTEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPG
KRRTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDN
RTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPASLG
LAGGHKETRERSMSETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSGSCGTERLHTVGGP
GSARPRAFSHSGVHSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGPFSASGEG
GALAAGGRPPLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGATDIDLKC
KERVTDSESGDSSGEDPEGSKGFGRKVFSPVIRSSFTHCRPPLDPEPPGPPDPSPPAFGK
GYGPTPSSSSSSPASSSAATSFPLGSGTFKAQESGQGSTAGPLRPPPPGAGGPGTPSKAT
RFLPSDPAAFRRKRPESVGGLEPPGPSVIAAPPGGGGSVLQTLVLPPNKEEREGSGTRMP
SAPAPSLAYGAPTAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASPNDTVGAR
TEPVTGSRAPGSSPLGVSLVYSDKKSAASSPAPHLVAGPLLSTVGKAPATVTNLLVGTPG
YGAPAPPAVQFIAQGAPGSGATTGSGAGAGSGPNGPVPLGILQPGTLGKAGGITQVQYIL
PTLPQQLQVAPAPTPAPGTKAAAPGGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPIL
QSVPSAPPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRAGGAGQPLPLVSPPF
SVPVQNGAQPPSKIIQLTPVPVSTPSGLVPPLSPATLSGPTSQPQKVLLPSSTRITYVQS
AGGHALPLGTSPTSSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSGQAPLLAPGQV
GVSPVPSPQLPPACTAPGGPVITAFYPGSPAPTSSAPLAQPSQAPPGLVYTVATSTTPPA
ATILPKGPPAPATATPAPTSPFPNAAAGSMTYSLVAPKAQRPTPKAPQKVKAAIASIPVG
SFEAGAPGRSGSAARQPLEPGPARELPTPESELEGQPATPAPPPPPETWAPMARSSPPPP
PPAEERTSSKGSETVASKFPSSSSSDWRVPGLGLESRGEPPTPPSPAPAPASAPSGSGSS
SSEGSSGRAAGDTPERKEAAGTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEF
RPEEVLPSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPN
TPKSAKCEGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFP
SAQATAAFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPAPPPTGTAA
APVPTPSPAGGPDPTSPGSDSGTAPAAPPLPPPPEPGPGQPGWEGPPQPSPPPPGPSTAA
TGR
NT seq
7572 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgaagaaggcatgtgtcagtctcccaggttctggcagtggcggcaaatcc
ccaccggccacccgggccaaggccctgagacggcgaggggctggggagggcgaaaagcca
gaggaggaagatgaagaggtacagcagcagcagccccagcagcctccggggccagaagag
gctgaggagggtgaggaggaggagtccgagcggggccctggggctgaggggctgaccctg
gagccgcaccctgacgacccagcggccccaggccctgctgaggaccccaaggtagagggg
gaggcaagtcgctgggagccctccctcagccgtaagacggccacgttcaagtctcgagcg
cccaagaagaagtatgtggaggagcatggagccggcagtggtagcagtgggccggccggg
gcccctgaggagcgggcacgaacccctgaggaggccggtgccctgggtgtccctccacgg
ccacccacctctacccgttcctcttccaccgacacagccagcgagcactcagctgacctg
gaagatgagcccgccgaagcctgtgggccaggcccctggcccccaagtggcaccagcggc
ggatacgacctgcggcagctgaggtcccagcgggtgctggctcggcgtggagatggcctc
ttcttgccggccgtggtgcgccaggtgcgccgaagccaggacctgggcgtgcagttccct
ggggatcgggcgctgacattctacgagggggcacccggcagtggtgttgatgtggttttg
gatgccacgccgccgccaggtgccctcgcggtgggcacagccgtctgtacctgcgtggag
cccggcgtggctgcctaccgtgagggtgtggtggtggaggtggccaccaagcctgccgcc
tacaaggtccgcctcagtcctggccctagctcccagcctggcccgctggccgctgtccca
cagcccccacagctgccacaccatgaacctgaggaggccgtgtgggtggcccgttccagc
ttgcgcctgctgcggcccccctgggagcctgaggccctgccaaggaagccccccgcgggc
cctgaggaggagcaggctgagccggggggcgccctgcccccctgccctgctgccctggac
cccaagcagcctgaggatgccgaggtgtctaagatcagctttggtggcaacctggggact
tgtgaggagggtgaggagaagcacccgccagccctgggcaccccggccctgctcccgctg
cctccgccccagctcctgtcaccgccaccaaagtccccagcttttgtgggcccgggccgc
cccggggagcagccgtcaccctgccaggaggggagccagggtggcagccggagcagcagt
gtggcctccctggagaagggggcagcgccagccgcccgggcacgcacaccgctgacagcc
gcgcagcagaagtataagaagggtgatgtggtctgcacgcccaacggaatccgcaagaag
ttcaacggcaagcagtggcgccggctgtgctcccgagatggctgcatgaaggagtctcag
cggcggggctactgctctcgccacctgtccatgcgaaccaaggagatggagggcctggcg
gacagcggcccagctggggctgggcggccggcaggcgtggcggcacgggagggcagcacc
gagtttgactggggtgacgaaacatcgcgggacagcgaggccagcagtgtggcagcccgc
ggggactcgcgcccacgcctggtggctcctgctgatctgtcccgctttgagtttgatgag
tgtgaggcggccgtgatgctggtgtcgctgggcagctctcgctctggcacaccctccttc
tctcctgtgtctacgcagtcgcccttctcacctgccccatcgccctccccatcgccgctc
tttggcttccgcccagccaacttcagccccatcaacgcctcaccagtcatccagcgcact
gccgtccgcagccgccacctaagcgccagcaccccgaagggaggtgtgctgaccccacca
gacctgggtccccacccgccgccacctgcccccagagagcgccattcttctggcatccta
cccaccttccagaccaacctgaccttcaccgtgcccatcagccctgggcggaggaagaca
gagctactcccccatccgggggctctgggggcccctggcgcagggggcggaggagccaac
ccggacttccccaagagtgacagcctagactctggtgtggactcggtgtcccacacacct
acaccctccacgccggctggcttccgggctgtgtcgcctgccgtgcccttctcccgttcc
cgccagccctcgccattgctgctgttgcccccacctgctggcctgacctcggatcccggg
ccctctgtgcgcagggttcctgctgtgcagcgggactcccccgtcattgttcgcaaccct
gatgtgccgctgccctccaaattccctggggaggtgagcactgctggtgaggcgcgggca
gcgggacctgggcggggctgccgagagaccccagtgccccctggggtagccagtgggaag
cctggcctgcccccacctctgccagcccctgtgcccatcaccgtgcctccagccgcgccg
actgccgtggcccagccgatgcccacctttggcctggcttcttcacccttccagccggtg
gccttccacccctcacctgctgccctattgcccgtcctggtccccagcagctacaccagc
catcctgcccccaaaaaggaagtcatcatgggccgacctgggacagtgtggacaaatgtg
gagcctcgctctgttgccgtgttcccctggcactccttagtcccttttctggcccccagc
cagcccgacccctctgtgcagccaagtgaggcccagcaacctgccagccacccagtggcc
tccacccagagcaaagaacctgctgagtcggcggctgtcgctcatgagcagccaccaggt
gggacagggaatgctgatcctgggcggccccctggagccacctgccctgagagcccaggg
cccggacccccccacactttgggggtggtggaacctggaaagggtccccctcccaccact
gaggaggaggcccctggccctccaggagagccccggctggacagtgagacggagagtgac
catgatgatgccttcctctccatcatgtctcccgagatccagttgcccctgccacccggg
aaacgccggacccagtccctcagtgccctgccaaaggaacgagactcctcttcggagaag
gatggacgcagccccaacaagcgggagaaggaccatattcggcggcccatgaacgccttc
atgatcttcagcaagcggcaccgggccctggtccaccagcgtcaccccaaccaggacaac
cggaccgtcagcaagattctgggcgagtggtggtatgccctggggcccaaggagaagcag
aagtaccatgacctggccttccaggtgaaagaggcccactttaaggctcacccagactgg
aagtggtgcaacaaggaccggaagaagtccagctcagaggccaagcctgcgagcctgggg
ctagcaggaggacacaaggagactcgggagcggagcatgtctgagacggggactgccgct
gcccctggagtgtcctcggagcttctctccgtcgcagcccagacactcctgagctcggat
accaaggctccagggagtggttcctgtgggacagagcgtctgcacacagtggggggacct
ggctcggcccggccccgagccttctcccacagtggggtccacagcctggatggtggggaa
gtagatagccaggcactacaggaactgactcagatggtgtccggccccgcatcctattct
ggtccaaagccttccacccagtatggggctccaggccccttctcagcctctggtgaggga
ggtgccctggcggctggcgggcgacccccgctgctgcccacccgggcctcccgttcccag
cgtgcagccagtgaggacatgacaagtgacgaggaacgcatggtcatctgtgaggaggag
ggagacgatgatgtcattgctgatgatggcttcggcgccactgacattgacctcaagtgc
aaggagcgggtgactgacagcgagagcggagacagctctggggaggacccagagggcagc
aagggttttggccggaaggtgttctcgcctgtgattcgttcctcctttacccattgccgc
ccaccattggaccctgagcccccagggcccccggatccatcacctccagcctttggcaaa
ggctatgggcccaccccgtcgtcgtcctcgtcctcacctgcctcctcctcagccgccacc
tccttcccactgggctcagggaccttcaaggcccaggagtcaggtcagggcagcacagca
ggcccactacgacccccacctcctggggctgggggcccagggacaccttccaaggccacc
cggttcctcccatcggatcctgccgccttccggcgcaagagacctgaaagtgtgggaggc
ctggagccaccaggcccctcggtcattgcagcacctcctggcgggggaggaagtgtcctg
cagacgctggtcctgcccccaaataaggaggaacgggaaggcagcggaacccgcatgccc
tcggccccagccccgtcactggcctatggggctccaacagccccgttgtcccgcccagct
gctaccatggtcaccaatgtggtgcggcctgtcagtagcactcctgtgcccatcgcctct
aagcccttccccacctctggccgggctgaggcatctccaaatgacactgtgggtgccagg
actgagccggtcacggggtcccgggcgccagggagctccccgctgggtgtaagcttagtg
tactcggacaagaagtcggcagcctcttcgccggccccgcatctggtggctgggcccctc
ctcagtaccgtgggaaaggcccctgccacagtcaccaacctgctggtgggcacaccgggt
tatggggccccagcgccccctgctgttcagttcatagcccagggggcccctggcagtgga
gccaccacaggctctggagcaggtgctgggagtggccccaatgggccagtgcccctgggc
atcttgcagccaggcaccttgggcaaggctgggggaatcacccaggtgcagtacatcctg
cccacgctgccccagcagcttcaggtggcgcctgccccgacaccagcccctgggaccaag
gcagcagctcctggcggccccgcaccaaccaccagcatccgtttcaccctccccccgggc
acctccaccaacggcaaagttctggcagccaccgcacccacccctggcatccccatcctg
cagtccgtaccctctgccccacctcccaaagcccagtcggtgtctcctgtacaggctccg
cccccgggtggctcagcccagcttctgcccgggaaggtactggtgcccttggcggcccct
agcatgtctgtgcgggctggaggggctggccagccactgcccctggtgagcccgcctttc
tcagtacctgtgcagaacggggcccagccacccagcaagatcatccagctgactccagtg
cccgtgagcacacccagcggcctggtgccgcccctcagcccagccacactctccggaccc
acctcccagcctcagaaggtcctgctgccctcctctaccagaatcacctacgtgcagtcg
gcgggtgggcacgccttgcccctgggcaccagccctacgtccagccaggctggaacagtc
acctcgtatgggcccacgagctcggtagccctaggcttcacctcgctggggcccagtgga
cccgcctttgtgcagcccctgctttcaggccaagctccgttgctggctcctggccaggtg
ggcgtgtcgccagtgcccagcccccagctgccgccagcctgcacagcccccggaggtccc
gtcatcactgcattttaccctggcagccctgcacccacctcctcagcacccctagcccag
ccatcccaggctcccccgggtctggtctacaccgtggccactagcaccaccccacctgct
gccaccatcctgccaaagggcccaccagcccctgccactgccaccccggcccctaccagc
cctttccctaatgctgcagcaggctccatgacctacagcttagtggcccccaaggcccag
cggcccacccccaaggccccccagaaagtgaaggcagccattgccagcattcccgtgggt
tccttcgaggcaggtgcccctgggcggtcaggctctgcagcccggcagcccttggagcct
ggcccagcccgggagctccctacccctgagtctgagcttgaggggcagcctgcaacaccg
gcccctccaccacccccagagacctgggctcccatggcccggagcagccccccgcctccc
ccacctgctgaggagcggacaagcagcaagggctctgagactgtggccagcaaattcccc
agctcttcgtcttcagactggcgagtccctgggctgggtctggagagccgtggggagcct
cccacccctcccagcccagcgccagctccggcctcagcccccagcggcagtggcagcagc
agcagtgagggcagcagtgggagggcagccggggacacccctgagcgcaaggaggccgct
ggtaccggcaagaaggtgaaggtgcggcccccgcccctgaagaagacctttgactctgtg
gacaacagggtcctgtcagaggtggacttcgaagagcgctttgctgagctgcctgagttc
cggcctgaggaggtgctgccttcgcccaccctgcagtctctggccacctcgccccgggcc
atcctgggctcctaccgcaagaagaggaagaactccaccgacctggactcggcccctgag
gaccccacctcgcccaagcgcaagatgaggagacgctccagctgcagctcagagcccaac
acccccaagagtgccaagtgcgagggggacatcttcaccttcgaccgtacaggtacggaa
gcggaggatgtgctcggggagctggaatacgagaaggtgccatactcttccctgcggcgt
accctggaccagcgtcgggccctggtcatgcagctcttccaggaccatggcttcttccca
tcagcccaggccacggcagctttccaggcccgctacgcagacatcttcccctccaaggtg
tgtctgcagttgaagatccgtgaggtgcgccagaagatcatgcaggcggccactcccacg
gagcagccccctggagctgaggccccccttcctgcaccgccccccactggcactgctgct
gcccctgtccccactcccagccctgctgggggccctgaccccacctcacctggctcggac
tctggcacagctccagctgccccgccactgcctccgcctccggagccaggtcccggacag
cctggctgggagggccccccccagccgtcccccccaccccccggcccctccacagctgcc
acaggcaggtga
DBGET
integrated database retrieval system
