Lutra lutra (Eurasian river otter): 125089349
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Entry
125089349 CDS
T08100
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03030
DNA replication
llv03410
Base excision repair
llv03420
Nucleotide excision repair
llv03430
Mismatch repair
llv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125089349
03410 Base excision repair
125089349
03420 Nucleotide excision repair
125089349
03430 Mismatch repair
125089349
03440 Homologous recombination
125089349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
llv03032
]
125089349
03400 DNA repair and recombination proteins [BR:
llv03400
]
125089349
Enzymes [BR:
llv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125089349
DNA replication proteins [BR:
llv03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
125089349
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
125089349
MMR (mismatch excision repair)
DNA polymerase delta complex
125089349
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
Ig_M157
Motif
Other DBs
NCBI-GeneID:
125089349
NCBI-ProteinID:
XP_047567471
LinkDB
All DBs
Position
17:53309889..53332753
Genome browser
AA seq
1107 aa
AA seq
DB search
MDGKRRPGPGPGVPPKRARAGLWDEEEPCQPSQFEEELALMEEMEAEHRLREQEEELVQP
GLDGAADGQFSPMAIDARWLRPTPPPLDPQTEPLIFQQLEIDHYVGPAQPLPWIPQPSRN
PVPVLRAFGVTDEGVSVCCHIQGFAPYFYTPAPPGFGPDHLGELQRELNAAISRDQRGGK
ELMGPAVLSVELCSRESMFGYHGHGPSPFLRITLALPRLMAPARRLLEQGIRVAGLGTPS
FAPYEANVDFEIRFMVDTDIVGCNWLELPAEKYVLRSEGKATLCQLEADVLWSDVVSHPP
EGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPC
APILGAKVQSYEREEELLQAWSAFIRAMDPDVITGYNIQNFDLPYLISRAQTLKVHTFPF
LGRVSGLRSNIRDSSFQSKQTGRRDSKVVSMVGRVQMDMLQVLLREHKLRSYTLNAVSFH
FLGEQKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTG
VPLGYLLSRGQQVKVVSQLLRQAMREGLLMPVVKTEGGEDYTGATVIEPLKGYYDVPIAT
LDFSSLYPSIMMAHNLCYTTLLRPGAAQRLGLTEDQFIKTPTGDEFVKTSVRKGLLPQIL
ENLLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSV
TGFGRQMIEKTKQLVESKYTVENGYGTNAKVVYGDTDSVMCRFGVSSVAEAMALGREAAD
WVSGHFPPPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDTHDRMDCKGLEAVRRDNCPLV
ANLVTASLRRLLIDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYTGKQAH
VELAERMRKRDPGSAPSLGDRVPYVIIGAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQ
QLAKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRHSCCIGCRTVLN
HQGAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFY
MRKKVRKDLEDQEQLLRRFGPPGPEAW
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaagcggcggccaggcccagggccaggggtgcccccgaagcgggcccgtgcg
ggcctctgggatgaggaggagccatgtcagccatcccagtttgaggaggagctggcactg
atggaggagatggaggccgagcaccgactgcgggaacaggaggaggagttggtgcagccg
ggcctggacggagcagcagatgggcagttctccccaatggccatagatgcccgctggttg
cggcccacaccaccccctctggatccccaaacggagcctctcatcttccagcagttggag
attgaccattacgtaggcccagcacagcccctgccttggataccccagccgtcccgcaac
cccgtgccagtgctccgtgcctttggagtcaccgacgagggcgtgtcggtctgctgccac
atccagggcttcgcaccttacttctacaccccggcgccccctggttttgggcccgaccac
ctgggtgagctgcagcgggagctgaatgccgccatcagcagggaccagcgaggagggaag
gagctcatggggccggcggtgctgtccgtggagctgtgctcccgggagagcatgttcggg
taccacgggcacggcccctccccatttctacgcatcacgctggcgctgccacgcctcatg
gcccctgcccgccgcctcctggagcagggcatccgtgtggcaggcctgggcacccccagc
ttcgcaccttatgaggccaatgtcgactttgagatccggttcatggtggacacagacatt
gtcggctgcaactggttagaactcccagcagagaaatatgtcctgaggtcggaggggaag
gccacactgtgtcagctagaggcagacgtgctgtggtctgacgtggtcagtcacccgcca
gaagggcagtggcagcgaatcgcacccctgcgcgtgctcagctttgacatcgagtgcgct
ggtcgcaaaggcatcttccctgaacctgagcgggaccctgtgatccagatctgctcactg
ggcctgcgctggggtgagccggagcccttcctgcgcctggcactcaccctacggccctgt
gcccctatcctgggcgccaaagtgcagagctacgagcgggaggaggagctgctccaggca
tggtcagccttcattcgtgccatggaccccgacgtgatcaccggctacaatatccagaac
tttgaccttccgtacctcatctctcgggcccagactctcaaggtgcacacattccccttc
ctgggccgtgtgtctggcctccgctccaacatccgggattcatccttccagtccaagcag
actggccggcgggacagcaaggtggtcagcatggtgggccgcgtgcaaatggacatgttg
caggtgctgctgcgtgagcacaagctccgctcctacacgctcaatgccgtgagcttccac
ttcctgggcgagcagaaggaggacgtgcagcacagcatcatcactgacctgcagaatggg
aatgaccagacgcgccgccggctggccgtgtactgcctcaaggatgccttcctgcccctg
cggctgctggaacggctaatggtgctggtcaatgccatggagatggcacgagtcactggc
gtgcccctcggctacctgctcagccgtggccagcaggtcaaggtcgtgtcccagctgctg
cggcaggccatgcgcgagggactgctgatgcccgtggtgaagacagagggtggcgaggac
tacacgggggccacagtcatcgagcccctcaaagggtactatgatgtccccattgccacc
ctggacttctcctctctgtacccgtccatcatgatggcccacaacctgtgctatacaacg
cttctgcggcctggggccgctcagagactgggtctgactgaggatcagttcatcaagaca
cccacaggggatgagtttgtgaagacatcagtgcggaaagggctgctgccccagatcctg
gagaacctgctcagcgcccggaagagggccaaggctgagctggccaaggagacagacccc
ctgcgtcggcaagtcttggatgggcggcagctggcattgaaagtgagtgccaattctgta
tatggcttcactggtgcccaggtgggcaagctgccatgcctggagatctcccagagcgtc
actgggttcgggcgccagatgattgagaaaacaaagcagctggtggaatccaagtacacg
gtggagaatggctatggcaccaacgccaaggtggtgtatggtgacactgactcagtcatg
tgccgatttggtgtctcgtctgtggcggaggcaatggctctggggcgggaagctgctgac
tgggtatcgggccactttcccccacccatccggctggagtttgaaaaggtctactttccc
tacctgctcatcagcaagaagcggtatgctggcctgctcttctcctcccggcctgatact
cacgaccggatggactgcaagggcctggaggccgtgcgtagggacaactgcccccttgtg
gccaaccttgtcactgcctccctgcgccgcctcctcatcgaccgagacccggcgggtgct
gtggcccatgcgcaggacgtcatctccgacttgctatgtaaccgcattgacatctcccag
ctggtcatcaccaaggaactgacccgcgcggctgctgactacaccggcaagcaggcccac
gtggagctggccgagaggatgaggaagcgggaccccgggagtgcacccagcttgggcgac
cgtgtcccctacgtgatcatcggcgctgctaagggcgtggctgcctacatgaagtccgag
gaccccctgtttgtgctggagcacagcctgcccatcgacacgcagtactacctggagcag
cagctcgccaagccgctcctgcgcatctttgagcccatcctgggcgagggccgcgccgaa
gccgtgctgctgaggggtgaccacacacgctgcaagacggtgctcacgggcaaggtgggc
ggccttctggcctttgccaaacgccacagctgctgcattggctgccgcaccgtcctcaac
caccagggagccgtgtgcaagttctgccagcctcgggagtctgagctctaccagaaggag
gtgtcccacctgaacgccctggaggagcgcttctcgcgcctctggacccagtgccagcgc
tgccagggcagcctgcacgaggacgtcatctgcaccagccgggactgccccatcttctac
atgcgcaagaaggtgcggaaggacctggaagaccaggagcagcttctgaggcgctttggc
cctcctggccctgaggcctggtga
DBGET
integrated database retrieval system
