KEGG   Lutra lutra (Eurasian river otter): 125089363
Entry
125089363         CDS       T08100                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 4A isoform X1
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03250  Viral life cycle - HIV-1
llv03272  Virion - Hepatitis viruses
llv04144  Endocytosis
llv04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125089363
   03272 Virion - Hepatitis viruses
    125089363
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    125089363
  09143 Cell growth and death
   04217 Necroptosis
    125089363
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:llv04131]
    125089363
   03400 DNA repair and recombination proteins [BR:llv03400]
    125089363
Membrane trafficking [BR:llv04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    125089363
DNA repair and recombination proteins [BR:llv03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    125089363
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 TIP49 AAA_16 AAA_22 AAA_14 AAA_5 RuvB_N IstB_IS21 AAA_25 DUF815 AAA_17 AAA_2 AAA_18 AAA_33 NPHP3_N nSTAND3 RNA_helicase AAA_24 PhoH ResIII AAA_28 AAA_7 Mg_chelatase NACHT Parvo_NS1 YhdB bpMoxR ABC_tran AAA_30 Sigma54_activat TPR_2
Other DBs
NCBI-GeneID: 125089363
NCBI-ProteinID: XP_047567496
LinkDB
Position
17:complement(16670670..16682174)
AA seq 437 aa
MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKC
MQYLDRAEKLKDYLRNKEKHGKKPVKENQSESKGSDSDSEGDNPEKKKLQEQLMGAVVME
KPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV
ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE
SEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARA
QMFRLHLGSTPHNLTEANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHFKKVCG
PSRTNPSVMIDDLLTPCSPGDPGAMEMTWMDVPGDKLLEPVVCMSDMLRSLATTRPTVNA
DDLLKVKKFSEDFGQES
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgacaacgtcaaccctccagaaagccattgatctggtgacgaaagccacggaagaggat
aaagccaagaattacgaggaggccctccggctctaccagcatgccgtggagtatttccta
catgctatcaaatatgaggcacacagcgacaaggccaaggagagcattcgagccaagtgc
atgcagtacctagatcgggcggagaagctgaaggattatttacggaacaaagagaagcat
ggcaagaagccagtcaaagaaaatcagagtgagagtaagggcagtgatagtgacagcgaa
ggggataatccagagaaaaagaaattgcaagaacaactgatgggtgctgttgtgatggag
aagcccaacattcggtggaatgatgtggctggcttggagggggccaaggaggccctcaaa
gaagctgtcattttgccaattaaattcccacacttgttcacaggcaagcgtacaccttgg
cgagggatactgctctttggaccccctggcacagggaaatcctacctggccaaagcggtg
gccacagaggccaacaactccaccttcttctctgtgtcctcctcagacttgatgtctaag
tggttgggtgagagtgagaagctagtcaagaacctgttcgagctggccaggcagcacaaa
ccctccatcatcttcatcgatgaggtggattccctctgtgggtcccgcaatgaaaacgag
agcgaagccgcccgaaggatcaaaacggagttcttggtccagatgcagggggtggggaat
aacaatgacgggactctggttcttggtgccaccaacatcccctgggtgttggattcagcc
attagaaggaggtttgaaaagaggatttacatcccactgcctgaggaggctgcccgagcc
cagatgttccggttgcacttggggagcactccccacaacctcacggaggccaacatccat
gagctggcccggaagacggaaggctactcgggtgccgacatcagcatcattgtgcgggac
tccctcatgcagccggtcagaaaagttcagtcagcgacacacttcaaaaaggtctgtggt
ccttcccgcaccaatcctagcgttatgattgatgacctcctgaccccttgctcaccaggg
gacccaggagccatggagatgacttggatggatgtccctggtgacaaactcttagagcct
gtggtttgcatgtcggacatgctccggtctctggccaccactcggcccaccgtgaatgca
gatgacctcctgaaagtgaagaaattctcagaggactttggacaggagagttaa

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