Lutra lutra (Eurasian river otter): 125089388
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Entry
125089388 CDS
T08100
Name
(RefSeq) cadherin-1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04015
Rap1 signaling pathway
llv04371
Apelin signaling pathway
llv04390
Hippo signaling pathway
llv04514
Cell adhesion molecules
llv04520
Adherens junction
llv05100
Bacterial invasion of epithelial cells
llv05200
Pathways in cancer
llv05213
Endometrial cancer
llv05216
Thyroid cancer
llv05218
Melanoma
llv05219
Bladder cancer
llv05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
125089388
04390 Hippo signaling pathway
125089388
04371 Apelin signaling pathway
125089388
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125089388
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125089388
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125089388
09162 Cancer: specific types
05226 Gastric cancer
125089388
05216 Thyroid cancer
125089388
05218 Melanoma
125089388
05219 Bladder cancer
125089388
05213 Endometrial cancer
125089388
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125089388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125089388
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
llv04515
]
125089388
04090 CD molecules [BR:
llv04090
]
125089388
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
125089388
Cell adhesion molecules [BR:
llv04515
]
Cadherins
Major cadherins
125089388
CD molecules [BR:
llv04090
]
Proteins
125089388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_4
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
125089388
NCBI-ProteinID:
XP_047567524
LinkDB
All DBs
Position
17:complement(17081145..17166849)
Genome browser
AA seq
885 aa
AA seq
DB search
MGPRYPSVCALLLLLQVSSWLCQEPGPCRPGFGSDSYTFTVPRRHLERGRVLGRVSFEGC
TGRPGTAYNADDTRFKVNADGVVTVKRPLQLHKPELSFLVHAWDSSRRKLSARVTLKAAE
HRDHHHRHHHHDAISETQTEVLTFPNSQRGLRRQKRDWVIPPISCPENEKGPFPKNLVQI
KSNRDKEIKVFYSITGQGADTPPVGVFVIERETGWLKVTEPLDREQIAKYILYSHAVSSN
GNAVEDPMEIVITVTDQNDNKPEFTQEVFEGSVMEGALPGTSVMQVTATDADDDVNTYNA
AIAYRIVTQDPLLPSSMMFTINKDTGVISVLTTGLDREKIPMYTLVVEAADLQGEGLSTT
ATALITITDINDIAPVFQPTTYQGRVPENKANVEIAVLKVTDDDVPNTPAWQAVYTILNN
NDEKFVVTTDPVTNDGILKTAKGLDFEAKRQYILYVTVVNVAPFEVILSTSTATVTVDVE
DVNEAPVFVPCPKEVHIPEDFGVGLEITSYTAKDPDQFMEQSITYRIWRDAAGWLEINPE
SGAIFTRAELDREDTEHVKNSTYEAIIIAVDNGSPVATGTGTLLLILSDVNDNGPVPEPR
NMDFCQKSPQPHVINIIDPDLPPNTSPFTAELTHGASVNWTIEYNDQAHESLILKPKKTL
ELGDYKINLKLTDNQNKDQVTTLDVYVCDCEGVTNNCKRVAPYAEAGLQVPAILGILGGI
LALLILILLLLLFVRRRGVVKEPLLPPEDDTRDNVYYYDEEGGGEEDQDFDLSQLHRGLE
ARPEVTRNDVAPTLLSVPHYLPRPANPDEIGNFIDENLKAADTDPTAPPYDSLLVFDYEG
SGSEAASLSSLNSSESDQDQDYDYLNEWGNRFKKLADMYGGGEDD
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgggccctcggtaccctagcgtctgcgcgctcctgctgctgctacaggtctcatcgtgg
ctctgccaggagccagggccctgtcgtcctggctttggctctgacagttacacgttcaca
gtgccccggcgacatttagagagaggccgagtcctgggcagagtgagttttgaaggatgc
actggccggccagggacagcctacaatgctgatgacacgcgattcaaagtgaacgcagat
ggtgtggtgactgtcaagcgacctctacaacttcataaaccggagctgagttttctggtc
cacgcctgggactccagccgcaggaagctgtctgccagagtcacgctgaaggcagccgag
caccgtgaccaccatcaccgccaccaccatcatgatgctatctctgaaacccagacagaa
gtgctcacatttccgaactcccagcgtggtctcagaagacagaagagagactgggttatc
cctcctatcagctgcccagaaaatgagaaaggcccatttcctaaaaatctggttcagatc
aaatctaacagggacaaagaaatcaaggttttctacagcatcactggtcaaggagctgac
acacctccggttggtgtatttgttattgaaagagaaacgggatggctgaaggtgacagag
cctctggatagagaacaaatcgccaagtacatcctctattctcacgccgtgtcttctaat
gggaatgcagtcgaagacccaatggagatcgtgatcactgtgactgatcagaatgacaac
aagcctgagttcacccaggaggtctttgaaggatctgtcatggaaggtgctctgccaggc
acctccgtgatgcaggtcacggccacagatgcggatgacgacgtgaacacctacaacgcc
gccatcgcttaccgcatcgtcacccaagaccccctcctgcccagcagcatgatgttcact
atcaacaaggacacaggagtcatcagcgtgctcaccactgggctggaccgggagaaaatt
cccatgtacaccctggtggtcgaggctgctgacctgcaaggtgaagggttaagtacaacc
gcaacggctctgatcacaatcactgacatcaacgatatcgcccccgtattccagcccacc
acgtaccaggggcgggtgcctgagaacaaggccaacgttgaaatcgccgtactcaaagtg
actgatgacgatgtccccaataccccagcatggcaggccgtgtacaccattttgaacaat
aacgatgagaagtttgttgtcaccacagacccagtaaccaacgacggcattttgaaaaca
gctaagggcttggatttcgaggccaagcggcagtatattctgtatgtgaccgttgtgaat
gtagccccgtttgaggtcattctctccacctccacggccactgtcactgtggacgtggag
gacgtgaatgaagcccccgtctttgtgccttgcccaaaggaagtgcacatacctgaagac
ttcggtgtgggcctggaaatcacgtcttacactgccaaagacccggaccagttcatggaa
cagagcataacgtaccggatttggagggatgctgccggttggctggagattaatccagaa
tctggtgccattttcactcgggctgagctggacagagaggacacggagcatgtgaagaac
agcacgtacgaggccatcattatagccgttgacaacggttctccagttgctactggaacg
ggaaccctcctcctgatcctctctgatgtgaatgacaatggccctgtaccagaacctcga
aatatggacttctgccagaagagtccacagcctcatgtcatcaacatcattgacccagat
cttccgcccaacacatctcccttcacagcagaactaacgcatggggcaagtgtcaactgg
accattgagtacaatgaccaagcccatgaatctctaattttgaagccgaaaaaaacctta
gagttgggtgactacaaaataaatctcaagctcacggataaccagaacaaggaccaggtg
accaccctagatgtgtacgtgtgcgactgtgaaggggtcaccaacaactgcaagagggtg
gcgccatacgccgaggcaggcttgcaggttcctgccattctgggcattcttggaggaatc
ctcgctttactaatcctcattctgctgcttctgctgtttgttcggaggagaggggtggtc
aaagagcccttactacccccagaagatgacacccgggacaacgtttactactatgatgaa
gaaggaggtggagaagaggatcaggactttgacttgagccagctgcacaggggcctggaa
gctcggccggaagtaactcgcaatgatgtggcgccaaccctcctgagtgtgccccattac
ctgccccgccctgccaatcctgatgaaattggaaactttattgatgaaaacctgaaggca
gcagacactgaccccactgctcctccttacgactctctgctggtgtttgactatgaaggg
agtgggtccgaagctgctagtctgagctccttgaactcctcagagtcagaccaagaccag
gactatgactacctgaacgaatggggcaatcgcttcaagaagctggcggacatgtacgga
ggtggcgaggatgactag
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