KEGG   Lutra lutra (Eurasian river otter): 125089607
Entry
125089607         CDS       T08100                                 
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125089607
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:llv03400]
    125089607
DNA repair and recombination proteins [BR:llv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     125089607
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 125089607
NCBI-ProteinID: XP_047567875
LinkDB
Position
17:complement(48408510..48430578)
AA seq 629 aa
MPEIRLRHVVSCSSQDLTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI
GNDGSAFVEVLVGSSAGGTGEQDYEVLLVTSSFMSPSESRSGSNPNRVRIFGPDKLVRAA
AEKRWDRVKIVCSQPYSKDSPYGLSFIRFHSPPDKEEAEASPQKVTKLGQFRVKEEDEGA
NSLRPGALFFSRINKTPPATASDTAGPSYAAATLQASSAASSASPVSRAVGGTSKPQESP
KGKRKLDLNQEERKTPSKPSAQPSPPTVKRPKLPAPTRTPATTPVPAPARGTVPGKSREG
TKPRGPRAGPQELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICA
FANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSRRYLMAGPSSSSEDEGGSHSSSSGD
EAPKLPQKRPQTKTKPPQAAGPSSPQRPKTPEETKPASPGPQEDTDTDGEQSEQGNGAED
SGDTEDELRRVAEQREQKQPPDQGENGEDPYAGSTDENTDNEGPPESPELPVPELPDFFQ
GKHFFLYGEFPGDERRKLSRYVTAFNGELEDYMSDRVQFVITAQEWDPSFEEALMDNPSL
VFVRPRWIYSCNEKQKLLPHQLYGVVPQA
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgccggagatccgtctccgccatgtggtgtcctgcagtagccaggacttgacccactgt
gcagaaaaccttctcaaggcggacacttaccgaaaatggcgagcagccaaggcaggcgag
aagaccatctcggtggtgctccagttggagaaggaggaacagatacacagcgtggacatc
ggcaatgacggctcggccttcgtggaggtgctggtggggagctcagccggaggcactggg
gagcaagactacgaggtcctgctggtcacctcgtctttcatgtccccttctgagagccgc
agtggctcaaaccccaaccgtgttcgcattttcgggcccgacaagttggtccgggcagca
gcggagaagcgctgggaccgcgtcaaaatcgtttgcagccagccttacagcaaggactcc
ccctatggcctgagttttatacggtttcacagccccccagacaaagaggaggcagaggcc
tcaccccagaaggtgaccaagcttggccagttccgcgtgaaggaggaggatgagggtgcc
aactccctgagacccggcgccctcttcttcagccggatcaataagacgcccccagccaca
gccagtgacacggcaggacccagctacgcagctgccaccctgcaggcctctagtgccgcc
tcttcagcctctcccgtctccagggcagtaggcggcacctccaagcctcaggagtccccc
aaagggaagagaaagttggatttgaaccaagaagaaaggaagacacccagcaaaccatca
gcccagccctcaccacccactgtcaagagacccaaattgccagctcccacccgcaccccg
gccaccaccccagtccctgccccagcacgaggcacagtgccaggaaagtcccgagaaggc
accaagcccagaggaccccgagctggcccgcaggagctggggaagatccttcagggtgtg
gtggtggtgctgagtggcttccagaaccccttccgctcggagctccgggacaaggcccta
gagctgggggccaagtatcggccggactggactccagacagcacccaccttatctgcgcc
tttgccaacacccccaagtacagccaggtcctaggcctcggaggccgcatcgtgcggaaa
gagtgggtgctggactgtcaccggatgcggcggcgactgccctcccggaggtacctcatg
gcaggaccaagctccagcagcgaggacgaagggggctctcacagcagcagcagtggggat
gaagcccccaagcttccccagaagcgcccccagaccaaaaccaagccccctcaggcagca
ggacccagctcacctcagagacccaaaaccccagaagagaccaaaccagcctcaccagga
ccccaggaagacaccgacactgatggggagcagtcagaacagggcaatggggcagaagat
tctggagatactgaggatgagctgagaagagtagccgagcagagggagcaaaagcagccc
cctgaccagggggagaatggcgaggacccgtatgcaggatccacagatgagaacacagac
aatgagggtcccccagagtctcccgaactgccagttcccgagctcccagacttcttccag
ggcaaacacttctttctgtacggagagttccctggggatgagcggcggaagctcagccga
tatgtcacagcctttaacggggagcttgaggactacatgagcgaccgggtccagtttgtg
atcacagcacaggagtgggaccccagttttgaggaggccctgatggacaacccctccttg
gtgtttgtccgcccccggtggatctacagttgcaacgagaagcagaagttgcttccacac
cagctgtatggggtggtgccccaggcctga

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