KEGG   Lutra lutra (Eurasian river otter): 125089812
Entry
125089812         CDS       T08100                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
llv  Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:llv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:llv04812]
    125089812
Cytoskeleton proteins [BR:llv04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     125089812
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_SCAP Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_HPS5 WD40_RFWD3 Beta-prop_RIG_1st Beta-prop_WDR19_1st RMC1_N WDR54 eIF2A Beta-prop_IP5PC_F Beta-prop_LRRK2 PROPPIN VPS8_N Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 125089812
NCBI-ProteinID: XP_047568223
LinkDB
Position
17:complement(26656270..26677171)
AA seq 674 aa
MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYRGHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLERFQVVSCIEGEPGPVRSVLFN
PDGCCLYSGCQDSLRVYGWEPERCFDVVLVSWGKVADLAVCNDQLIGVAFSQSNVSSYVV
DLTRVTRTGTVAQDPVQDSRPLAQQPAHPSAPLRRIYERPGTACSKPQRVKQNSESERRS
PSSEDDRDERESRAEIQNAEEYNEIFQPKNSISRTPPRRSEPFPAPPEDDMVSAKEVAKP
SPATDSQFPVPNDGQRGWPRAGSPLSSGPHQLEVPPRPPAVTPTPAPKAELAIIPATRNE
PIGLKASDFLPAVKIPQQAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTGDI
KTSVDSAVAINDLSVVVDLLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTS
LKLILQRFLPLITDILAAPPSVGVDISREERLHKCRLCYKQLKSISGLVKSKSGLSGRHG
SAFRELHLLMASLD
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggccacccctgtggttaccaagacggcctggaagttacaggagattgtcgcccacgcc
agtaatgtgtcctcgctggtgctgggcaaggcctccgggcggctgctggctactggtggg
gatgactgccgtgtcaacctgtggtccatcaacaaacccaactgcatcatgagcctgacg
ggtcacacgtccccagtggagagcgtccgcctcaacaccccggaggagctcatcgtggcc
ggctcccagtcaggctccatccgcgtttgggacctagaagctgccaaaattcttcgcacg
ctgatgggccacaaagccaacatctgcagcctggacttccacccgtacggcgagttcgta
gcctcgggctcccaggacacgaacatcaagctctgggacatccgaaggaaaggctgtgtt
ttccggtataggggacacacccaggccgtgcggtgcctccggttcagccccgacgggaag
tggctggcatcggccgcagatgaccacacagtgaagctctgggatctgactgctggcaag
atgatgtccgagttccctggccacacagggcctgtcaacgtggtggagtttcaccccaat
gagtacctgctggcttctggcagctcggacaggaccatccggttctgggatctggagagg
ttccaggtggtgagctgcatcgaaggagagccggggcccgtcaggagtgtcctgttcaac
cccgacggctgctgcctgtacagcggctgccaggactcgctgcgcgtctacggctgggag
cctgaacgctgctttgatgtggtcctggtcagctggggcaaggtggccgacctggctgtc
tgcaacgaccagctgataggtgtggccttctcccagagcaacgtctcctcttatgtggtg
gacttgacgcgggtcaccaggacaggcacggtggcccaggaccccgtgcaggacagccgg
cccctggcacaacagccagcccaccccagtgcccctcttcggcgcatctatgagcggcct
ggcacagcctgcagcaagcctcagagggtaaagcagaattcggagagtgagcgccgcagc
cccagcagcgaggatgaccgggacgagcgtgagtctcgggccgaaatccagaacgccgag
gagtacaacgagatcttccagcccaagaacagcatcagccggacaccaccccgaagaagt
gagcccttcccggcacccccggaggatgatatggtctcagccaaggaggtggccaagccc
agcccggccacagactcgcagttcccggtgccaaatgatgggcagagggggtggcctcgg
gctggctccccactgagctctggaccccaccagctcgaggtcccgccccggcccccggct
gtcactcccacgcccgcgcccaaggctgagctcgccatcatccctgccacccggaacgag
cccatcgggctgaaggcctccgacttcctgcctgccgtgaagatcccccagcaggccgag
ctggtcgacgaggacgctatgtcgcagatccgcaaaggccatgacactatgtgcgtggtg
ctcaccagccgccacaagaacctggacaccgtgcgggccgtgtggaccacaggggatatc
aagacgtcggtggactcggctgtggccatcaatgacctgtcagtggtagtggacctcctg
aacattgtcaaccagaaagcctccctgtggaagctggacctgtgcaccactgtcttgccc
cagatcgagaagcttctgcaaagcaagtatgagagctacgtgcagactggctgcacgtcc
ctgaaactgatcctgcagcggtttctgcccctgatcacggacatcctggcagcgcccccc
tctgtgggggtggacatcagccgagaggagaggctccacaagtgccggctgtgttacaag
cagctgaagagcatcagtggcctcgtcaagagcaagtcgggtttgagtggccgccacggc
agtgccttccgggagctgcacttacttatggccagtttggactga

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