Lutra lutra (Eurasian river otter): 125090138
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Entry
125090138 CDS
T08100
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125090138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125090138
03012 Translation factors [BR:
llv03012
]
125090138
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
125090138
Translation factors [BR:
llv03012
]
Eukaryotic type
Release factors
125090138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
125090138
NCBI-ProteinID:
XP_047568564
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Position
18:complement(9490769..9524854)
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AA seq
641 aa
AA seq
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MDPGSGGGGGGGGGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGAGGPLATAAATEAQRE
HLSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAQQPPPPAGAAAAPNHGAGSGAGGPP
APVEPSQEEQSLLCEGSNSAVSMELSEPVVENGETEMSPEESWEHKEEISEAELGGGSLG
DGRPPEEGTQEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLT
GMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILD
APGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVL
INKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEHSDFCPW
YTGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNK
HNVEVLGILSDDVETDSVAPGENLKIRLKGIEEEEILPGFILCDLNNLCHSGRTFDAQIV
IIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLR
TAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggcagtggcggtggcggcggcggcggcggcgggagcagcagcggcagcagc
agcagcgactcggcgcccgactgctgggaccaggcggacatggaagcccccgggccgggc
ccgtgtggcggcgccggcggccccttggcgacggcggcggcgaccgaggcccagcgtgag
cacctcagtgcggccttcagccggcaactcaacgtcaacgccaagcccttcgtgcccaac
gtccacgccgccgagttcgtgccgtccttcctgcggggcccggcccagcagccgccgccc
ccagccggcgccgccgccgcccccaaccacggagccggcagcggcgcgggaggccctccg
gcacctgtggaaccttctcaggaggaacagtcattattgtgtgaaggttcaaattcagct
gttagcatggaactttcagaacctgttgtagaaaatggggagacagaaatgtccccggaa
gaatcatgggagcacaaagaagaaataagtgaagcagagttagggggtggttccttggga
gatggaagacccccagaggagggcacccaagaaatgatggaggaggaagaggaaatacca
aaacctaaatctgtggtcgcaccccctggggctcctaaaaaagaacatgtaaatgtggta
ttcatcggacatgtagatgctggcaagtcaaccattggaggacaaataatgtatttgact
ggaatggttgacaaaaggacacttgagaagtatgaaagagaagctaaagagaagaacaga
gaaacttggtatctgtcttgggccttagatacaaatcaggaagaacgagacaagggtaaa
acagtagaagtgggccgtgcctattttgaaacagaaaagaaacatttcacaattctggat
gcccctggccacaagagttttgtcccgaatatgataggtggcgcttctcaagctgatttg
gccgtactggtcatctctgctcggaaaggagagtttgaaactggatttgagaaaggcgga
cagacgagagaacatgcgatgttggcaaagacggcgggtgtgaagcacttgattgtgctt
attaataagatggatgatccgacggtaaattggagcaatgagagatacgaagaatgtaaa
gagaaactagtgccatttttgaaaaaagttggcttcaatcccaaaaaggacattcacttc
atgccctgctcaggactgacgggagcaaatcttaaagagcactcagacttttgtccttgg
tacactggattaccgtttattccttacctggataatttgccaaacttcaatagatcagtt
gatggaccaatcaggctgccaattgtggataagtacaaggatatgggcactgtggtcctg
ggaaagctggaatcaggatctatttgtaaaggccagcagcttgtgatgatgccaaacaag
cacaatgtggaagttcttggaatcctttccgatgatgtagaaactgattctgtagctcca
ggtgaaaacctcaaaatcagactgaaaggaattgaagaggaggagattcttccaggattc
atactttgtgatcttaataatctttgtcattctggacgtacatttgatgcccagatagtg
atcatagagcacaaatcaatcatctgcccaggttataatgcggtgctgcatattcacacc
tgtattgaggaagtcgaaataacagccttaatctgcttggtagacaaaaaatcaggagaa
aaaagtaagactcgaccccgttttgtgaagcaagatcaagtatgcatcgctcgcttaagg
acagcgggaaccatctgccttgagacctttaaagacttccctcagatggggcgctttacc
ttacgagatgagggtaaaaccattgcaatcgggaaagttctgaaactggttccagagaaa
gactaa
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