Lutra lutra (Eurasian river otter): 125090211
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Entry
125090211 CDS
T08100
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04010
MAPK signaling pathway
llv04020
Calcium signaling pathway
llv04713
Circadian entrainment
llv04925
Aldosterone synthesis and secretion
llv04927
Cortisol synthesis and secretion
llv04929
GnRH secretion
llv04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125090211
04020 Calcium signaling pathway
125090211
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
125090211
04925 Aldosterone synthesis and secretion
125090211
04927 Cortisol synthesis and secretion
125090211
09159 Environmental adaptation
04713 Circadian entrainment
125090211
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
125090211
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
llv04040
]
125090211
Ion channels [BR:
llv04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125090211
BRITE hierarchy
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GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF4834
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
125090211
NCBI-ProteinID:
XP_047568692
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All DBs
Position
18:926141..982283
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AA seq
2341 aa
AA seq
DB search
MTEGAQAADEVRVPLGAPAPGPAAAAAGASPASPGVPGRKAEPGSGPGASPPESPAAERG
AELGADEEQPVPYPALAATVFFCLGQTTRPRSWCLRLVCNPWFEHVSMLVIMLNCVTLGM
FRPCEDVECQSERCSTLEAFDDFIFAFFAVEMIIKMVALGLFGQKCYLGDTWNRLDFFIV
MAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFF
VFFIFGIVGVQLWAGLLRNRCFLDSAFARNNNLTFLRPYYQTEEGEENPFICSSRRDNGM
QKCSHIPSRRELRVECTLGWEAYGQPQREGVAGAAHNACINWNQYYNVCRSGGSNPHNGA
INFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVI
ATQFSETKQRENQLMREQRARYLSNDSTLASFSEPGSCYEELLKYVGHICRKVKRRGLRL
YARWQSRWRQKVDPSSGLHSQGPGRRPRRAGRPTASVHHLVYHHHHHHHHHYHFSHGSPR
RPEPSPGDTRLVRAGALPSPPSPGHGPPDAESVHSVYHADCHVEGPQERARVASTTATAN
LKLATGLGAMNYPTILPSSAGVGKGGTGPKGKRAGGPPGAGEHSPLSLRGADPYEKIQHL
VGEHGLGRAPSHLSGLSVPCPLPSPQAGTLTCELKDCPYCASALDDPDFELSDSESGGSE
GNTVYEFTQDAQHGDRRDPMRAPPAADAPGQGSTRPRAQRRAAPGEQGGLGHAWAAFSGK
LCRIVDSKYFNRGIMVAILTNTLSMGVEYHEQPDELTSALEISNIVFTSMFALEMLLKLL
ACGPLGYIHNPYNIFDGIIVVISVWEIVGQADGGLSVLRTFRLLRVLKLVRFLPALRRQL
VVLMKTVDNVATFCMLLTLFIFIFSILGMHLFGCKFSLTTDTGDTVPDRKNFDSLLWAIV
TVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDAN
RSDTDEDKTSTHLEEDFDKFSDLRATEMKMYSLAVTPNGHPEGRGSLPPPLIMRTAATPM
PTPKSSPHLDPAPGLLDSRRGSSSSVDPQLGDQKSLSSLRSSPCAPWGPNSAWSSRRSSW
NSLGRAPSLKRRSQCGERESLLSGEGKGSTDEEAEDGRPGARASPETRPVPLRRAESLDH
RSSLDVRPPRLAALLPPKSQDCNGQALALPSEFFLRIDSHKEDPTEFDDDMEDSCCLRLH
KVLEPYKPAWCRSREPWALYLFSPQNRFRVSCQKIIAHKMFDHVVLVFIFLNCITIALER
PDIDPGSTERVFLSVSNYIFTAIFVAEMMVKVVALGLVSGSHAYLQSSWNVLDGLLVLVS
LVDIIVAMASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVL
ICCAFFIIFGILGVQLFKGKFYYCEGADTRNISTKAECWAAHYRWVRRKYNFDNLGQALM
SLFVLSSKDGWVNIMYDGLDAVGIDQQPVPNHNPWMLLYFISFLLIVSFFVLNMFVGVVV
ENFHKCRQHQEAEEARRREEKRQRRLQRKRRSTSPSPEAQRRPYYADYSPTRRSIHALCT
SHYLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTVVFVFEAALKLVAFGFRR
FFKDRWNQLDLAIVLLSIMGIALEEIEMSAALPINPTIIRIMRVLRIARVLKLLKMATGM
RALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSEDNPCEGLSRHATFSNFG
MAFLTLFRVSTGDNWNGIMKDTLRECAREDKHCLSYLPAISPIYFVTFVLVAQFVLVNVV
VAVLMKHLEESNKEAREDAELDAEPDLEEAPGPPAGPPPAAPRSPDAPGLLVVRKVSVSR
VLSLPNDSYMFRPVAPASAPHPRPPREADAAGPATSAHPPPGEPCSFLQAPSTATLSPAR
DSDTLHALSPRGAARSPSLSRLLYRQEAMHTDSQEGHVDSPRDSGPGWGEPGRKTPVRQA
SLGPSLRSPPRSPRPSSIRTRKHTFGQRCVSSRPPAPGGEAAETPDPADEEVSHITSSAR
SPSASPTARGGGGRDPDLCGLYGMDTQGFLEQPGQADEHRRASGEQGGGDGPPEAREVKA
RAPEAEPALGARRKKKMSPPCISVDPPVEDEGTARPPPAEGSSTTLRRRTPSCEVVPHRD
SLEPVEGVGVDPGAKGERRAQAACRAEHLTVPNFAFEPLDVGGPGGGPFLDGGHNVAPEP
RASFSGATVPPEPHKTEPPVSSSDPPEKEWGLHLKVLQSPPKKAGSPPATPTPGGSVDRP
V
NT seq
7026 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagggcgcgcaggcggccgacgaggtccgagtgcctctgggcgctccggccccc
ggcccggcggcggcggcggctggggcgtccccggcgagccccggggtgccggggcggaag
gcggagccggggtccgggcccggcgcgtcgccccccgagagcccggcggccgagcgcggc
gcggagctgggcgccgacgaggagcagcccgtcccgtacccggcgctggcggccacggtc
ttcttctgcctcgggcagaccacgcggccgcgcagctggtgtctccggctggtctgtaac
ccgtggttcgagcacgtcagcatgctggtcatcatgctcaactgcgtgaccctgggcatg
ttccggccctgtgaggacgtcgagtgccagtcagagcgctgcagcaccctggaggccttc
gacgatttcatcttcgccttcttcgcggtggagatgatcatcaagatggtggccctaggg
ctcttcgggcagaagtgctacctgggggacacgtggaacaggctggatttcttcatcgtc
atggcgggcatgatggagtactcgctggacgggcacaatgtgagcctctcggccatccgg
actgtgcgcgtgctgcggcctctccgcgccatcaaccgtgtgcccagcatgcggatcctg
gtcacgctgctgctggacacactgcccatgctcgggaacgttctcctgctctgcttcttc
gtcttcttcatcttcggcatcgtgggtgtccagctgtgggctggcctgcttcgcaaccgc
tgcttcctggacagcgcctttgccagaaacaacaacctcaccttcctgcggccgtactac
cagacggaggagggcgaggagaaccccttcatctgctcctctcgccgggacaacggcatg
cagaagtgctcgcacatccccagccgccgggagctgcgcgtggagtgcacgctgggctgg
gaggcctacgggcagccgcagcgcgagggtgtggccggtgccgcccacaacgcctgcatc
aactggaaccagtattacaacgtgtgccgctccggcggctccaacccccacaacggcgcc
atcaacttcgacaacatcggctacgcatggatcgccatcttccaggtgatcacgctggag
ggctgggtggacataatgtattacgtcatggacgcgcattctttctacaacttcatctac
ttcattctgctcatcatcgtgggttccttcttcatgatcaatctgtgcctggtggtgatc
gccacgcagttctcggagaccaagcagcgggagaaccagctcatgcgggagcagcgggcg
cgctacctgtccaacgacagcacactggccagcttctcagagccgggcagctgctacgag
gagctgctcaagtacgtgggccacatctgccgcaaggtcaagcggcgcggcctgcgtctg
tatgcacgctggcagagccgctggcgccagaaggtggaccccagcagcggcctgcacagc
cagggccctgggcggcggccgaggcgggcgggaaggcccacggcctccgtccaccacctg
gtctaccaccatcaccaccaccaccaccaccactaccacttcagccacggcagcccccgc
cggccggagcccagccctggggacacccggctggtgcgggccggggccttgccctcgccg
ccctcgccgggccatgggccccccgatgccgagtcggtgcacagcgtgtaccatgcagac
tgccacgtggaggggccgcaggagcgggcccgggtggcgtccaccacagccaccgccaac
cttaagctggccacagggctgggagccatgaactaccccaccatcctgccctcatccgcg
ggggtcggcaaaggcggcaccggacccaaggggaagcgggctggcgggcctccaggagct
ggagagcacagccccctgagcctgaggggtgccgacccctacgagaagatccagcatttg
gtcggggaacatggactgggccgggcccccagccacctctcgggcctgagcgtgccctgc
cccctgcccagcccccaggcaggcacgctgacgtgcgagctgaaggactgtccgtattgc
gccagcgccctggacgaccctgacttcgagctcagcgactctgagagcggaggctcggaa
ggcaacacggtgtacgagttcacacaggacgcgcagcacggggaccgccgcgaccccatg
cgggccccaccggcagccgacgcgccgggccagggcagcacgcggccacgggcgcagcgg
cgggcggccccgggcgagcagggcggtcttggccacgcgtgggccgccttcagtggcaag
ctgtgccgcatcgtggacagcaagtacttcaaccgtggcatcatggtggccatcctcacc
aacacgctgagcatgggcgtggagtaccatgagcagcccgatgagctgaccagcgccctg
gagatcagcaacatcgtcttcaccagcatgttcgccctggagatgctgctgaagctgctg
gcctgtggcccgctgggctacatccacaacccctacaacatcttcgacggcatcatcgtg
gtcatcagcgtgtgggagatcgtggggcaggcggacggcgggctgtcggtgctgcggacc
ttccggctgctgcgggtgctgaagctggtgcgtttcctgccggcgctgcggcgacagctg
gtggtgctcatgaagaccgtggacaacgtggccaccttctgcatgctgctcacactcttc
atcttcatcttcagcatcctgggtatgcacctctttggctgcaagttcagcctgacgaca
gacaccggagacacggtcccggacaggaagaactttgactccctgctgtgggccatcgtc
actgtgttccagatcctcacccaggaggactggaacgtggtcctctacaacggcatggcc
tccacctcctcctgggccgccctctacttcgtggcgctgatgactttcggcaactacgtg
ctcttcaacctgctggtggctatcctggtggagggcttccaggcggagggggacgccaac
aggtccgacacagacgaagacaagacgtccacccacttggaggaggattttgacaagttc
tcagatctccgggccactgagatgaagatgtactcattggctgtgacccccaacgggcac
ccagagggccgaggcagcctgccccctcccctcatcatgcgcacggcggctacacccatg
cccacccccaagagctccccgcacctggacccggcccccggcctcctggactcgcggcga
ggcagcagcagctctgtggacccccagctgggcgaccagaagtcgctgtccagcctccga
agctcgccctgcgccccctggggccccaacagtgcctggagcagccggcgctcgagctgg
aacagcctgggccgcgcacccagcctcaagcggcggagccagtgtggggagcgtgagtcc
ctgctgtccggggagggcaagggcagcacggacgaggaggcggaggacggcaggcccggg
gcaagggcctccccggagacacgccccgtcccgctgcggcgtgctgagtccctggaccac
cgcagcagcctggatgtgcggcccccgcggctggctgcgctgctgcccccaaagtcccag
gactgcaacggacaggcactggccctgcccagcgagttcttcctgcgcatcgacagccac
aaggaggatcccacggagttcgacgacgacatggaggacagttgctgcttgcgcctgcac
aaggtgctggaaccctacaagcccgcatggtgtcgcagccgcgagccctgggccctgtac
ctcttctctccgcagaacaggttccgggtctcctgccagaagatcatcgcccacaagatg
ttcgatcacgtggtcctggtcttcatctttctcaactgcatcaccatcgccctagagagg
cccgacatcgacccgggcagcaccgagcgcgtcttcctcagcgtttccaactacatcttc
acagcgatcttcgtggccgagatgatggtgaaggtggtagccctgggcctggtctccggc
agtcacgcctacctgcagagcagctggaacgtgctggatgggctgttggtcctggtgtcc
ctggtggacatcatcgtagccatggcctcggcggggggcgccaagatcctgggcatcctg
cgtgtgctgaggctcctgcggacgctccggcccttgagggtcatcagccgagctccaggc
ctcaagctcgtggtggagaccctgatatcgtcactcaggcccatcgggaacatcgtcctc
atttgctgcgctttcttcatcatctttggcatcctgggggtgcagctcttcaaaggcaag
ttttactactgcgaaggcgcggacaccaggaacatttccaccaaggccgagtgctgggcg
gctcactaccgctgggtgcggcgcaagtacaacttcgacaacctgggccaggcgctgatg
tccctgtttgtgctgtcgtccaaggacggctgggtgaacatcatgtatgacgggctggac
gccgtgggcatagaccagcagcccgtgcccaaccacaacccctggatgctgctctacttc
atctccttcctgctcatcgtcagcttttttgtgctcaacatgttcgtgggcgtcgtggtg
gagaacttccacaagtgccggcagcaccaggaggccgaggaggcgcggcggcgcgaggag
aagcggcagcggcggctgcagcgcaagcgcaggagcacttcccccagcccagaggcccag
cgccgcccctactacgcggactactcgccgacccgccgctccatccacgcgctgtgcacc
agccactacctcgatctcttcatcacgttcattatcggggtcaacgtcatcaccatgtcc
atggagcactacaaccagcccaagtcgctggacgaggccctcaagtattgcaactacgtg
ttcaccgtcgtcttcgtcttcgaggccgcgctgaagctggtggccttcgggttccggagg
ttcttcaaggacaggtggaaccagctggacctggccatcgtgctgctgtccatcatgggc
atcgcgctggaagagatcgagatgagcgccgcgctgcccatcaaccccaccattatccgc
atcatgcgtgtgctccgcatcgcccgcgtgctgaagctgctgaagatggccaccggcatg
cgggcgctcctggacacggtggttcaagccctgccccaggtagggaacctcggcctactt
ttcatgctcctgttttttatctatgctgccctgggggtggagctgttcgggaggctcgag
tgcagcgaggacaacccgtgtgagggcctgagccggcacgccaccttctccaacttcggc
atggccttcctcacactgttccgcgtgtccaccggggacaactggaacggcatcatgaag
gacacgctgcgggagtgcgcccgcgaggacaagcactgcctcagctacctgcccgccatc
tcccccatctacttcgtcacctttgtgctggtggcccagttcgtgctggtcaacgtggtg
gtggccgtgctcatgaagcacctggaggagagcaacaaggaggcccgcgaagacgcagag
ctggacgcggagccggacctggaggaggccccggggccccccgccgggcccccgcctgcg
gccccgcgcagcccggacgcccctggcctcttggtggtgcgcaaggtgtccgtgtccagg
gtgctgtccctgcccaatgacagctacatgttccggccagtggcacccgcctcagcccca
cacccccgcccgccacgggaagcggacgccgctggcccggcgacctctgcacacccccca
cccggggagccctgcagctttctccaggccccctcgacggccacactctccccagcccgg
gacagcgacacgctccacgccctgtccccacggggtgcagcccgctcccccagcctcagc
cggctgctctacagacaggaggccatgcacacggactcgcaggaaggacacgttgacagc
cccagagacagtggcccgggctggggggagcctggcaggaagacccccgtgaggcaggca
tccctggggccctccctacggtccccaccccggtccccgcggcccagcagcatccgcacc
cgcaaacacacgtttggacagcgctgtgtctccagcaggccgccggccccaggaggggag
gcggccgagaccccagatcctgctgacgaggaggtcagccacatcaccagctcggcccgg
agcccctcagcctcacccactgcccgcggagggggaggcagagacccggacctgtgcggg
ctctacggcatggacacccagggcttcctggaacagccgggccaggcagatgagcacagg
cgggcctccggggagcaggggggcggggacgggcccccggaggctcgggaggtgaaggct
cgggcgccggaggccgagccagccttgggggcacgcaggaagaagaagatgagcccccct
tgcatctccgtggacccccctgtggaggacgagggcacggcccggccccccccagccgag
ggcagcagcaccactctgcggcggcgaaccccgtcctgtgaggtcgtaccgcacagggac
tccctggagcccgtggagggggtgggggtggaccctggagccaagggggagcggcgggct
caggccgcctgccgcgcggaacacctgaccgtccccaacttcgccttcgagccgctggac
gtggggggccctggcggaggcccgtttttggacggtggccacaatgtggccccagaaccc
agggcttccttctcaggggccacggtgcctcctgaaccccacaaaacagagcctcctgtg
tcctccagcgaccccccagagaaggaatgggggttgcacctcaaagtcctccagagtccc
ccaaagaaagcagggtctcccccagccacccccacccccgggggcagcgtagacaggccc
gtgtag
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integrated database retrieval system
