KEGG   Lutra lutra (Eurasian river otter): 125090252
Entry
125090252         CDS       T08100                                 
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 4-like
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03015  mRNA surveillance pathway
llv05164  Influenza A
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    125090252
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    125090252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:llv03021]
    125090252
   03019 Messenger RNA biogenesis [BR:llv03019]
    125090252
Transcription machinery [BR:llv03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     125090252
Messenger RNA biogenesis [BR:llv03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     125090252
SSDB
Motif
Pfam: zf-CCCH zf-CCCH_3 Torus zf-CCHC zf_CCCH_4 zf-CCCH_2 zf-CCCH_4 zf-CCHC_3 zf-C3H1 Nab2-like_zf-CCCH_
Other DBs
NCBI-GeneID: 125090252
NCBI-ProteinID: XP_047568760
LinkDB
Position
18:complement(34157251..34170287)
AA seq 269 aa
MQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFXKAACGKGGMCPFRHI
SGEKTVVCKHWLRDCARRGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPXGTTEQPP
LPQQTQPPTKQSNNPPLQRSSSLIQLTSQNSSPNQQRAPQVIGVMQSQNSSAGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq 810 nt   +upstreamnt  +downstreamnt
atgcaggaaatcatcgccagcgtggaccacatcaagttcgacttggagatcgcagtggag
cagcagctaggggcacagccgctgcccttccccggcatggacaagtcaggggctgctgtc
tgtgaattctttntgaaagctgcctgtggcaaagggggcatgtgtcccttccgccacatc
agtggtgagaagaccgttgtgtgcaaacactggctgcgggactgtgcaagaaggggggac
cagtgtgagtttctgcacgagtacgacatgaccaagatgcctgagtgctacttctactcc
aagtttggggagtgcagcaacaaggagtgccccttcctgcacatcgaccctgagtccaag
atcaaggactgcccttggtacgaccgtggcttctgcaagcatggtcccctgtgcaggcac
cggcacacacggagagtcatctgtgtgaattacctcgtgggattctgcccagaggggccc
tcgtgtaaattcatgcaccctcgatttgaactgccanatggaaccactgagcagccccca
ctgccacagcagacgcagcctccgacaaagcaaagtaacaatccgccattacaaaggtcg
tcctccttgatccagttaacgagtcagaactcttctcccaatcagcagagagccccgcag
gtcatcggggtcatgcagagtcaaaacagcagcgcaggcaaccggggaccccggccgctg
gagcaggtcacctgttacaagtgtggcgagaaaggacactacgccaacagatgcacgaaa
gggcacttggcctttctcagtggacagtga

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