Lutra lutra (Eurasian river otter): 125090427
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Entry
125090427 CDS
T08100
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04120
Ubiquitin mediated proteolysis
llv04137
Mitophagy - animal
llv04144
Endocytosis
llv04340
Hedgehog signaling pathway
llv04350
TGF-beta signaling pathway
llv04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125090427
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125090427
04350 TGF-beta signaling pathway
125090427
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125090427
04137 Mitophagy - animal
125090427
09144 Cellular community - eukaryotes
04520 Adherens junction
125090427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125090427
04121 Ubiquitin system [BR:
llv04121
]
125090427
03029 Mitochondrial biogenesis [BR:
llv03029
]
125090427
Enzymes [BR:
llv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125090427
Membrane trafficking [BR:
llv04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
125090427
Autophagy
Mitophagy
Other mitophagy associated proteins
125090427
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
HECT type E3
125090427
Mitochondrial biogenesis [BR:
llv03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
125090427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
125090427
NCBI-ProteinID:
XP_047569046
LinkDB
All DBs
Position
18:34395708..34501131
Genome browser
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPSDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPA
PYTDSTAAAAGGGDCRFVESPSQDQRLQAQRLRNPEVRGSLQTPQNRPHGHQSPELPEGY
EQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVD
HNNRTTQFTDPRLHHIMNHQCQLKEPSQPLPLPSEGSVEDEELPAQRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
ELELIIGGLDKIDVSDWKSNTRLKHCGADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
VPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccccgggacgcgcaggaacggctccagcatcaagatccgtctgacagtatta
tgtgccaagaaccttgcaaagaaagacttcttcagactccccgacccctttgcaaagatt
gtggtggacggatctgggcagtgccactcaacggacactgtgaaaaacacgttggacccc
aaatggaaccagcactacgatctgtatgtcggcaaaacggattccataaccatcagcgtg
tggaaccacaagaaaatccacaagaagcagggggctggctttctgggctgcgtgcggctg
ctctccaacgccatcagccgattaaaagataccggataccagcgtttggatctatgcaaa
ctaaacccctcagatactgatgcagttcgtggccaaatagtggtcagtttacagacacga
gacaggataggcactggaggctccgtggtggactgcaggggactgttagagaacgaagga
accgtgtatgaagactcggggcccgggaggccactcagctgcttcatggaggagccggcc
ccttacacagacagcaccgctgctgctgcggggggaggggactgcaggttcgtggagtcc
ccaagtcaagatcagagactccaggcgcagcgactccgaaatcccgaggtccgggggtct
ctccagacgcctcagaaccgaccccacggccaccagtcaccagaactgcccgaaggctat
gaacaaagaacaacggtgcagggccaagtttactttctgcacacacagactggagtcagc
acgtggcacgaccccaggataccaagagaccttaacagtgtgaattgtgatgaacttgga
ccactgccaccaggttgggaagtccgaagtacggtttcggggagaatatattttgtagat
cataataaccgaacaacccagtttacagacccaagattacatcacatcatgaatcaccag
tgccagctaaaggagcccagccagccgctgccattgcctagcgagggctctgtggaagac
gaggagcttcccgctcagagatatgaaagagatttagtccagaagctgaaggtcctcaga
cacgaactttcactgcagcaaccccaggcaggtcactgccgcatcgaagtatccagagaa
gaaatatttgaggagtcttaccgtcagatcatgaagatgcggccaaaggatctgaagaag
cggctgatggtgaaattccggggagaggaaggtctggattatggcggagtggcgagggag
tggctttacttactgtgccatgaaatgttgaatccgtattacggactcttccaatattct
acggacaacatttacatgttgcaaatcaacccagattcctcaatcaaccccgaccatcta
tcttacttccattttgtgggccggatcatgggtctcgctgtgttccacggacactacatc
aacgggggcttcacggttcccttctataagcagctcctggggaagcccatccagctctcg
gatttggagtcggtggatccagaattacataagagcttagtgtggattctagagaacgat
atcacccctgtgctggaccataccttctgtgtggagcacaatgccttcgggaggattctc
cagcatgaactgaagcccaatggccgaaacgttcctgtcacagaggagaacaagaaagaa
tatgtccggttgtacgtaaattggagattcatgagggggatcgaagcccagttcttagct
cttcagaaaggatttaatgaactcattcctcaacacttactaaagccctttgaccagaag
gaactggagctgatcatcggcggcctggataagatcgacgtgagcgactggaagtccaac
actcggctgaagcactgcggggccgacagcaacatcgtccggtggttctggcaggcggtg
gagaccttcgacgaggagaggagggccaggctcctgcagttcgtgacagggtccacccgg
gtccctctccaaggcttcaaggctttgcaaggctctacaggcgcggcagggccccggctc
ttcaccatccacctcatcgacgccaacacagacaacctcccgaaggcccatacctgcttt
aatcggattgacattccaccgtatgaatcctacgagaagctctatgagaagctgctgaca
gcagtggaggagacgtgtggctttgctgtggagtga
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