Lutra lutra (Eurasian river otter): 125090484
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Entry
125090484 CDS
T08100
Name
(RefSeq) trinucleotide repeat-containing gene 18 protein isoform X1
Organism
llv
Lutra lutra (Eurasian river otter)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_TNRC18
BAHCC1-like_Tudor
BAH
Tudor_3
Motif
Other DBs
NCBI-GeneID:
125090484
NCBI-ProteinID:
XP_047569127
LinkDB
All DBs
Position
18:36448490..36533862
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AA seq
2973 aa
AA seq
DB search
MDGRDFGPPRSVHGPPPPLLSGLAMDSHRVGTAAAGRLPASGLPGPLPPGKYMAGLNLHP
HPGEAFLGSFVASGMGPSASSHGSPVPLPSDLSFRSPTPSNLPMVQLWAAHAHEGFSHLP
SGLYPSYLHLNHLEPPSSGSPLLSQLGQPSIFDTQKDGFYLPAPGAPGALHSHAPSSRTP
GAHSSSAPAKGSSREGPAKERAGRGGEPPPLFGKKDPRAREEAAGPRGVVDLTQEARAEG
RQDRGPPRHAERLSPFLAELGPPRGPGAAAECKGKNPPPPPPALSLCNGAGDTGLPALVA
KEVARQDESARLRRAETLLPGPCPCPSPLPPPPKGPPAPPTAPAGAFAAPQPASAGVYTI
FPAAAAAAAAAAREPGREHRVVAPTFVPSVEAFDERPGPIQIASQARDARAREREVGRPG
VLQAPPGSPRPPPERPEALREKNSVIRSLKRPPPAEAPPARAARASPDARAYLPAKELLK
PEAEPRACERAPRGPAAAAPQQASKLFGLEPARPPPPPAGPEPKWKPFELGNFATTQMAV
LAAQHHHASRAEEEAAASKKAYLDPGGALPRAAAACARPGADVHAAAHGPGEASAMQSLI
KYSGSFTREAVAVRPGGCGKKSPFGGLGTMKPEPAPTTAGAPRTQARLPHPGGPAAGGGR
QLKRDPERPESAKAFGREGSGAQGEAEVRHPPVGIAVAVARQKDSGGSGRLGPGLADQER
SLSLSNVKGHSRADGDCGDERTRHREERLLGARLDRDQEKLLRESKELADLARLHPTSCA
ANGLNPNLMVTGGPSLAGSGRWSADPAAHLGTHPWLPRSGSTSMWLAGHPYGLGPPPLHQ
GMAPAFPPGLGGSLPSAYQFVRDPQSGQLVVIPSDHLPHFAELMERAAAPPLWAALYPPG
RGPLHHAQQLQLFSQQRFLRQQELLYLQQQAAQALELQRSAQLVQERLKAQEHRVEMEEK
VSKRSLEAAGKAGLAAPGPGLLPRKPPGLAAGPTGTYGKAMSPPPSPRASPVAALKAKVI
QKLEDVSKAPTYAYPATPSSHPSSPPPASPPPTPGITRKEEAPENVVEKKDLELEKEAPS
PFQALFSDIPPRYPFQTLPPHYGRPYPFLLQPTAASDADGRAPDVPLPADGPERLALSPE
DKPIRLSPSKIPEPLREGPDEEPLVEREVKAEVEDMDDGPAEVPSLESPLTLAPEEALAA
PSPVAGCGGGLLEAQALSASGQGGMEPPGGPDFAEGAEARVDSPGRTEPCTAAPDLGVRL
TPETLVEAKEEPVEVPVDMPMAVSMAEAVPEEGLAQAAPSEPRPSLELADGDVPAGEGEC
LSLEAREAAPVPSGSCFLEEEGSDQFLPGLEDPLAGMNALAAAAELPQARPLPSPGPGTQ
ALEKLEAAQSLVLEQSFLHGITLLSEIAELELEKRSQEVGGAERGPAVRPSLESLLAASS
HMLKEVLDSPFVDPLKNLRLPRELNPNKKYSWMQKKEERMYAMKSSLESMDAMELDFRMR
LAEVQRRYKEKQRELVKLQRRRDPEDRREEPHRSLARRGPGRPRKRTHALSALSPPRKRG
KSRNSSGKLSSKPLLTSEEYELGAGMRKRHKGPEEEHDGLVATGKARGRSQPWDEHESSS
DFMSQLKIKKKKMASDQEQLASKLDKALSLTKQDKLKSPFKFSDSSGGKSKASGGCGRYL
TPYDSLLGKDRKALAKGLSLSLKASREGKHKRAAKARKMEVGFKARGQPKSAHSPFASEV
SSYSYNTDSEEDEEFLKDEWSAQGPSSSKLTSSILCGMVAKNKPPGGPKLTKRGLAAART
LKPKPAAGRKQPFCLLLQEVEARSSFSDSSEDSFDQDESSEEEEDEEDELEEEEDEAAGG
YRLGARERALSPGLEESGLGLLARFAASALPSPTVGPSLSVVQLEAKQKARKKEERQNLM
GTEFEYTDSESEVKVRKRSPTGLLRPKKGLGEPGPSLASPAPSARGPGPTSPDKTKLAAE
KGRKTRKLRGAKEPGFEAGPEASDDDLWTRRRSERIFLHDASAAAPAPSSAAPAATKPSR
CGKGGPLSPRKDTSRAKDRKDPRKKKKGKEAGSGAALPPPRVPALPPDARAPHTGSPAAA
KRSKAKAKGKEVKKENRGKGGAVSKLMESMAAEEDFEPNQDSSFSEDEHLPRGGAVERPL
TPAPRSCIIDKDELKDGLRVLIPMDDKLLYAGHVQTVHSPDIYRVVVEGERGNRPHIYCL
EQLLQEAINDVRPASTRFLPQGTRIAAYWSQQYRCLYPGTVVRGLLGLEDDGDLITVEFD
DGDTGRIPLSHIRLLPPDYKIQCAEPSPALLVPSAKRRSRKTSKDTGDSKDGGALGTEEP
GAKARGRGRKPSTKAKSDRAAVLEEGGPTEEVPSTPLALEPISTPSSKKSPPEPADKRAK
APKARPAPPQPSPAPSTFTSCPAPEPFGELPAPTAVLAPAPLVAMPITMPATRPKPKKAR
AAEEAAPKGSRRPGEEAELLVKLDHEGVTSPKSKKAKEALLLREDAGAGGWQEPKGLLTL
GGYPSAAGGGEPKAARPKATDGELAQEPGAGLEFESPGHPKSPDKGQAEQDGAEESESGG
SSSDSGGSSSSSSETEGEEEAQGGGGRNCSASSSRASSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDDSSCSSDDEAAPAPAAGPSAAP
ALPSKAPKPAGKGRSSAHSPGKKAPAPPPQAPPPQPPQPLPAKAQAGAGAKSRPKKREGV
HLPTTKELAKRQRLPSVENRPKIAAFLPARQLWKWFGKPTQRRGMKGKARKLFYKAIVRG
KEMIRIGDCAVFLSAGRPNLPYIGRIQSMWESWGSNMVVRVKWFYHPEETSPGKRLHEGQ
HWDQKSGRSLPAALRASSQRKDFMERALYQSSHVDENDVQTVSHKCLVVGLEQYEQMLKT
KKYQDSEGLYYLAGTYEPTTGMIFSTDGVPVLC
NT seq
8922 nt
NT seq
+upstream
nt +downstream
nt
atggatggccgagacttcgggcccccgcggtccgtgcacggccccccgccgccgctgctg
tccggcctggctatggacagccaccgcgtgggcaccgctgcggccggacgcctgcccgct
tctggcttgcccggcccgctgccgcccgggaagtacatggccggcctcaatctccacccg
cacccgggcgaggccttcttgggcagctttgtggccagcgggatggggccctcagcctcg
tcccatgggagccccgtgcccctgccctctgacctctccttccgctcccctacccccagc
aacctgcctatggtacagctgtgggccgctcacgcccatgaaggcttctcccatctgccc
agcgggctgtacccatcctacctccacttgaaccacctggagccccccagcagcgggagc
cccctcctcagccagctgggccagcccagcatcttcgatacccagaaagacggcttctac
ctgcccgccccgggggctccgggtgccctgcactctcacgcgccctcctccaggaccccg
ggcgcccactcctccagcgccccggccaaaggctcttcgcgggaaggtccagccaaggag
cgggcgggccgcggcggggagccgcccccgctgttcggcaagaaggacccgagggcccgc
gaggaggctgcggggccgcgcggcgtggtggacctgacccaggaggcgcgggcggagggg
cgccaggaccgcgggcccccgcgccacgctgagcgcctgtcgcccttcctggccgaactg
gggccgccgcgcgggccgggcgccgccgccgagtgcaagggcaagaacccgccgccgccg
cccccggcgctgagcctctgcaacggcgcgggcgacacagggctccccgcgctggtggcc
aaggaggtggcgcgccaggacgagagcgcgcggctgcggcgcgcagagaccctgctgccc
gggccgtgcccttgcccctcgccgctcccgccgccccccaagggcccgcccgcgcccccc
accgccccggcgggggccttcgccgcgccacagcccgcgtccgccggcgtctacaccatc
ttcccggcggcggcggcggcggcggcggcggcggcgcgcgagccgggccgcgagcaccgc
gtggtggcgcccaccttcgtgccttccgtggaggccttcgacgagcgcccggggcccatc
cagatcgcgtcgcaggcgcgcgacgcccgggcccgggaacgcgaggtgggcaggcccggc
gtcctgcaggcgccgcccgggtccccgcggccgcccccagagcggcccgaggcgctccgc
gagaagaactcggtcatccgctcgctcaagcggccgccgcccgcggaggccccgccggcg
cgggccgcgcgcgcctccccggacgcccgggcctacctccccgccaaggagctgctcaag
cccgaggccgagccgcgggcctgcgagcgcgccccccgcggccccgccgccgccgccccc
cagcaggcctccaagctgttcggcctggagcccgcgcggccaccgccgccgcccgccggc
cctgagcccaagtggaagcctttcgagctgggcaacttcgccaccacgcagatggccgtg
ctggccgcgcagcaccaccacgccagccgcgccgaggaggaggcggccgcctccaagaag
gcctacctggaccccgggggcgctctgccccgcgccgcggccgcctgcgccagacccggc
gccgacgtgcatgccgcggcccacgggccaggggaggcctccgccatgcagagcctcatc
aagtacagcggcagcttcacccgcgaggccgtggccgtgcgccctggcggctgcggcaag
aagagccctttcggaggcctgggcactatgaaacccgagcctgcccccaccaccgcgggc
gccccgcgcacccaggcccgcctgccacaccctggcggccctgcggccggtggaggccgg
cagttgaagcgggacccggagcggcccgagagcgccaaggctttcgggcgtgagggctct
ggggcccagggagaggcagaggtacgacacccgcccgtgggcattgcggtggccgtagcc
cggcagaaggacagtggcggcagtggccggctggggcctgggctggcagaccaggagcgc
tccctgtcgctgagcaacgtcaaagggcacagccgagctgatggtgactgtggggatgag
aggaccaggcaccgggaggagcggctgttgggggcgcggctggaccgagaccaggaaaag
ctcctcagagaaagtaaggagctagctgacctggcccgcttgcaccccaccagctgtgct
gctaatggcctgaaccctaacctcatggtgaccggtggcccatcgctggcaggctccggg
cgctggtccgccgaccccgcagcccatctgggcactcatccctggctgccccgctcgggt
agcacgtccatgtggctcgccgggcacccgtacggcttgggcccacctcctctgcaccag
ggcatggcgcctgccttcccgcctggcctggggggctccctgccatcagcttaccagttc
gtgagggacccccagtcgggccagctggtggtcattcccagcgaccacctgcctcacttt
gcggagctgatggagcgggccgcggcgcccccgctctgggctgccctgtacccaccaggc
cgcggccccctgcaccacgcccagcagctgcagctcttctcccagcagcgcttcctgcgg
cagcaggagctcctgtacctgcagcagcaggcagcccaggccctagaactgcagaggagc
gcccagcttgtgcaggagcggctgaaggcccaggaacatcgggtggagatggaggagaag
gtgagcaagcggagcctggaggctgcaggcaaggccggcctggctgcccccggccctggg
ctgctgcctcggaagccccccggcctggctgctggccccacgggcacctacggcaaggcc
atgagcccgccaccatctccccgcgcttcccctgtggctgccctgaaggccaaggtcatc
cagaaactggaagatgtgtccaaggcacccacctatgcctaccccgccacgcccagctcc
caccccagcagcccgccgcccgcctccccaccgcccactcctggcatcacccgcaaggag
gaggcgcctgagaatgtcgtggagaagaaggacttggagttggagaaggaagcccccagc
cccttccaggccttgttctcggatatcccacccaggtacccgtttcaaaccctgccgcca
cactacgggaggccctacccattcctgctgcagcccacagcggcctctgacgccgacggc
cgggcccccgatgtgccgctcccagccgatgggcccgagcgcctggcgctgtctcctgaa
gacaagcctatccgcttgtccccctccaagatcccagagcctttgcgcgagggccccgac
gaagagccgctggtagaacgggaggtgaaggccgaggtggaggacatggacgatggccct
gcagaggtgccctccttggagtctcccctgacattggcccctgaggaagccctggcagcc
ccaagccccgtggctggctgtggaggcggtctgctggaggcccaggcgctgagcgccagt
gggcaggggggcatggagccccccgggggcccggacttcgcggagggggccgaagcgcgg
gtcgattccccaggccggacagaaccgtgcacagccgccccggacctgggggtgcgactg
acgccagagacactggtcgaggccaaggaggagcccgtggaggtgcccgtcgatatgccc
atggccgtgtccatggcagaggcggtgcctgaggagggcctagcacaggcggccccgagc
gagccccggcccagcctggagttggcagatggtgacgtgcccgccggggagggggagtgc
ctgagtctggaggccagggaggccgcacctgtgcccagcggctcctgcttcctggaggag
gaaggctctgaccagtttctgcccggcctggaggacccactggctggtatgaacgctctg
gcggcggctgcggaactgccccaggccaggcctctgccctccccgggccccggcacccag
gccctggagaagctggaggcggcacagagcctggtcctggagcagagtttcttgcacggg
atcaccctgctgagcgagatcgccgagctggagctggagaagaggagccaggaggtggga
ggtgcggagcggggcccagcggtgcggccctcgctggagagcctgctggcagccagcagc
cacatgctgaaggaggtgttggacagccccttcgtggacccactcaagaacctgcggctt
ccgcgggagctgaaccccaacaagaagtacagttggatgcaaaagaaggaggaacggatg
tatgccatgaagtcgtccttggaaagcatggacgccatggagctggacttccggatgcgg
ctggccgaggtccagcggcggtacaaggagaagcagcgagagctggtgaagctgcagaga
cgccgtgaccccgaggacaggcgcgaggaaccccatagaagcttggcacgcagaggccct
ggcaggccgaggaaacggacccacgccctgagcgccctgtcgcccccccgcaagagaggg
aagagccgcaacagtagcggaaagctgagcagcaagcctctgctgacgtcggaggagtac
gagcttggagcaggcatgaggaagaggcacaagggacctgaggaggaacatgatggcctt
gttgccacggggaaagcgaggggcaggagccagccttgggatgagcacgaatcctcatca
gacttcatgagtcagctgaagattaaaaagaaaaagatggccagtgaccaggagcagctg
gccagcaagctggacaaggccctgtcgctcacgaagcaggacaagctcaagtcgcccttc
aagttctcagacagctctgggggcaagtccaaagcgagcgggggctgcggcaggtacttg
acgccctacgacagcctgctgggcaaggacaggaaggcgctggccaaaggcctcagtctg
tccctcaaagcctccagagaaggtaaacacaaaagggccgccaaagccaggaagatggag
gtgggcttcaaggccagaggccagcccaagtcggcccactccccgttcgcctcggaagtg
agcagctactcctacaatacggactcagaggaagacgaagaattcctgaaggacgagtgg
tctgcccaaggcccgtccagctccaaactgacgtcttccatcctgtgtggcatggtggca
aagaacaagccccccggaggccccaagctgaccaagaggggcctggcggccgcccggact
ctgaaacccaagccggccgctggcaggaagcagcccttttgtttgctgcttcaagaggtc
gaggcccgttcctccttcagcgattcctcggaggactcgtttgaccaagatgagagctcc
gaggaggaggaggacgaggaggatgagctggaggaggaggaggacgaggccgccggcggc
tataggctgggggcccgagagcgggccctgtcgccaggcctggaggagagtgggctgggc
ctgctggctcgctttgcagccagcgccctccccagccccacagtggggccatcgctatca
gtggtgcagctggaggccaagcagaaggcgcggaagaaggaagagcggcagaacctgatg
ggcacggaattcgagtacacggactcggagagtgaggtcaaggtgcggaagcggtcgcct
accgggctgctgcggcccaagaagggactaggggagcccgggccctccctggcctcccct
gcacctagcgcccggggccctggtcccaccagccccgacaagaccaagctggcggcagag
aaggggcgcaagacccgcaagctgcggggcgccaaggagcccggctttgaggcggggccc
gaggccagcgatgacgacctgtggacacggcggcggagcgagcgcatcttcctgcatgac
gcctcggccgccgccccagcccccagcagtgccgccccagctgccaccaagcccagccgc
tgcggcaagggtggcccgctgagccctcgcaaggacaccagccgtgccaaggacaggaag
gaccccaggaagaagaagaaggggaaggaggctggctcaggggctgcgctgcccccaccc
cgtgttcccgccctgccccccgacgctcgggctccccacaccggctccccggctgctgcc
aagaggagcaaggccaaggccaaagggaaggaggtgaagaaggagaaccgggggaagggg
ggagccgtgagcaagttgatggagagcatggctgctgaggaggacttcgagcccaaccag
gactccagcttctccgaggatgagcacctgccccgcggcggggccgtggagcggccgcta
actccggccccacgctcctgcatcatcgacaaggacgagctgaaggacggcctgcgtgtg
ctcatccccatggacgacaagctgctgtatgctgggcacgtgcagacagtgcactctccc
gacatataccgtgtggtggtggagggtgaacgtgggaaccggccccacatctactgtctg
gagcagctgctgcaggaggcgatcaatgatgtgaggccggcctccacccgcttcctgccg
caggggaccaggattgcggcctactggagccagcagtaccgctgcctatacccgggcacc
gtggtccgaggcttgctgggcctcgaggatgacggggatttgatcaccgtggagtttgat
gatggggacacggggaggatccccctctcccacatccgtctcctgcctcccgactataag
atccagtgtgcggagccctccccagctctcttggtgccaagcgccaagcgccgcagccgg
aagaccagcaaagacactggggacagcaaagatggcggcgccctggggacagaggagccc
ggcgccaaggcacgagggcgtgggcggaaacccagcaccaaagccaagagtgatagagct
gccgtcctggaggaggggggcccaacagaggaggtccccagtacccccttggccctggag
cccatcagcaccccaagttccaagaagagccccccagaacccgcggacaagcgggccaaa
gcccccaaggcccgcccagcacccccccagcccagcccggcaccatctactttcaccagc
tgtccggctcccgagcccttcggggagctgccggcccccaccgcggtcctggcccccgcc
cccctcgtcgccatgcccatcaccatgcctgccacccggcccaagcccaagaaagcgcgg
gctgctgaagaggcggcccccaagggctcccggaggcccggggaggaggccgagctgctt
gtcaagctggaccacgagggcgtgacgtcgcccaaaagcaagaaggccaaagaggccctg
ctgctgcgagaggacgcgggggcggggggctggcaggagcccaagggcctcctgaccctg
ggcggctacccctcggccgcgggcggcggcgagcccaaggccgcccggcccaaggccacg
gatggcgagctggcccaggagcccggggccgggctcgaatttgagagcccgggccacccc
aagagcccggacaagggccaggcggagcaggacggggctgaggagtcggagagcggcggc
agcagcagcgacagcggtggcagcagcagcagcagctccgagaccgagggggaggaggag
gcccagggcggtggcggtcggaactgcagcgcctctagctcccgggcgtcctcgtcctcg
tcctcctcgtcgtcgtcctcctcctcgtcgtcgtcctcctcgtcgtcctcgtcctcgtcg
tcgtcctcctcctcgtcgtcgtcctcgtcgtcgtcctcgtcgtcgtcctcgtcctcctcg
tcgtcgtcgtcgtcgtcgtcgtcctcctcctcgtcctcgtcgtccaccaccgacgactct
tcctgcagctccgacgacgaggcggcgcctgcccccgcggcgggcccgtcggccgcccca
gctctccccagcaaggcgcccaagccagcaggcaaggggcgctcctcggcccactccccg
ggcaagaaggcgccagcgcccccaccccaggcacccccgccgcagcccccgcagcccctg
ccggccaaggctcaggccggggcgggggccaagagccgacccaagaagagggagggcgtc
cacctcccgaccaccaaggagctggccaagcggcagcgcctgccgtccgtagagaaccgg
cccaagatcgccgccttcctgcctgcccggcagctctggaagtggttcggcaagcctacg
cagcgccgcggcatgaagggcaaggcccgcaagctcttctacaaggccattgtgcgtggc
aaggagatgatccgcatcggggactgcgccgtgttcctgtccgccggccgccccaatctg
ccgtacatcggccgcatccagagcatgtgggagtcgtggggcagcaacatggtggtccgc
gtcaagtggttctaccaccccgaggagaccagcccaggcaagcgtctccacgagggccag
cactgggaccagaagtccggccgcagcctccctgccgccctgcgggcctccagccagagg
aaggacttcatggagcgcgccctctaccagtcctcccacgtggacgagaacgacgtgcag
actgtgtcgcacaagtgcctggtggtgggcctggagcagtatgagcagatgctcaagacc
aagaagtaccaggacagcgagggtctgtactacctcgcgggcacctacgagcccaccacg
ggcatgatcttctccaccgacggcgtgcctgtgctctgctga
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integrated database retrieval system
