Lutra lutra (Eurasian river otter): 125090500
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Entry
125090500 CDS
T08100
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125090500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
llv03009
]
125090500
Ribosome biogenesis [BR:
llv03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125090500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Utp13
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_DCAF4
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
Beta-prop_Vps41
Beta-prop_IP5PC_F
WD_LRWD1
Ge1_WD40
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
125090500
NCBI-ProteinID:
XP_047569173
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Position
18:1563300..1570054
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AA seq
804 aa
AA seq
DB search
MAEPVAGVGRFKANYAVERKIEPFYKGGKVQLDQTGQHLFCICGTRVNILDVASGAVLRS
LEQEDQEDITAFDLSPDNEVLVTASRALLLAQWAWREGSVTRLWKAVHTAPVATMAFDST
STLLATGGCDGAVRVWDVVRHYGTHHFRGSPGVVHLVTFHPDPARLLLFSSAADATVRAW
SLRDGLCLAVMTAHYSAITSLTFSADGHTMLSSGRDKICVVWDLRSHQAMKTVPVFESVE
AAVLLPEEPAPELGIKSKGLHFLTAGDQGLLRVWEAASGQCVYMQQQPPGPQQELTRCAL
ARSAGLLLTVTADHNLLLYEARSLQLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSPSLK
VFELQTMACQLLHGHTDIVLALDVFRKGRLFASCAKDQSICLWRMNKAGKVTRVAQGSGH
THGVGAICCSRLKETFLVTGSQDCTVKVWPVPEALLSKGAAPDGGPVLLQAQATQRCHDK
DINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATAS
ADGTVKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLLKLWTIKNNECVKT
LDAHEDKVWGLHCSRLDDRALTGASDSCVVLWKDVTEVEQAEERARREEEVVKQQELDNL
LHEKRYLRALGLAISLDRPHTVLTVIQAIRRDPEACEKLGATVLRLRRDQKEALLRFCVT
WNTNSRHCHDAQAVLGVLLRHEPPEELLAYPGVQASLEALLPYTERHLQRLSRALQAATF
LDFLWHNMKLPALPAAPSVAPSAL
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacccgtggcgggagtgggccgcttcaaggccaactatgccgtcgagcgcaag
atcgagcccttctacaagggcgggaaggtgcagctggaccagaccgggcagcatctcttc
tgcatttgcggtaccagagtcaacatcttggacgtggcctcgggggccgtcctgcggagc
ctggagcaggaggaccaggaggacatcactgcctttgatctcagccctgacaacgaggtg
ctggtcacagccagccgggcactgctgctggctcagtgggcctggcgagagggcagcgtc
acccgcctgtggaaggcagtacacacagcccctgtggccaccatggcctttgactccact
tccacactgctagccacaggcggttgtgatggggcagtgcgtgtctgggacgttgtgcgg
cactacgggacacaccactttcggggctcgccaggggtcgtacacttagtgaccttccac
ccggaccctgcacgcctgctgctcttctcctctgctgcagacgccaccgtccgcgcgtgg
tcgctgcgggacgggttgtgtctggccgtgatgactgcccactacagtgccatcacctcc
ctgacctttagcgctgatggccacaccatgctgagctcaggccgagacaagatctgtgtt
gtgtgggacctgcggagccaccaggccatgaagactgtgccagtgtttgagagcgtggag
gccgcggtgctgctaccggaggaaccggcaccagagctgggtataaagtccaagggcctg
cacttcctgacagccggcgaccaaggcctgctgcgtgtgtgggaggcagcctcgggccag
tgtgtgtatatgcaacagcagccgccaggcccccagcaggagctgacccgctgcgctctg
gcccgctctgccggcctgctcctcaccgtcactgccgaccacaacctgctgctctacgag
gcgcgctccctgcagctgcagaagcagtttgccggctacagcgaggaggtgctggatgtc
cggtttcttgggcctgaggactcccacgttgttgtggcctccaacagccccagcctgaaa
gtgtttgagctgcagacaatggcctgccagcttctccacggccacacagacattgtcttg
gccctggacgtgtttcggaaggggcggctctttgccagctgtgccaaggatcagagtatc
tgtctctggaggatgaacaaggctggcaaggtgacccgtgtggctcagggctccgggcac
acacacggcgtgggtgccatctgctgctccaggctgaaggagaccttcctggtgacgggg
agccaggactgcactgtgaaggtgtggcccgtccctgaagccctgctgtccaagggtgca
gccccagacggcggtcctgtccttctccaggcccaggccacacagcgctgccatgacaag
gacatcaacagcgtggctattgcccccaacgacaagctgctggccacaggctcacaggac
cgcacagccaagctctgggctttgccacagtgccagctgctcggcgtcttctccggccac
cggcgcggcctctggtgtgtccagttctcgcccatggaccaggtgctggccacagcctca
gccgacggcaccgtcaagctctgggcgctgcaggacttcagctgccttaagacattcgag
ggacacgatgcttcggtgctgaaggtggcctttgtgagccgtggcacccagctgctgtcc
agcggctctgacggtctcctgaagctctggaccatcaaaaacaacgagtgcgtgaagacc
ctggacgcccacgaggacaaggtctgggggctgcactgcagccggctggacgatcgcgcc
ctcaccggcgctagtgactcctgcgttgtcctctggaaggatgtgaccgaggtggagcag
gccgaggagcgagcccggcgggaggaggaggtggtcaagcagcaggaactagacaacctg
ctccatgagaagcggtacctgcgggcactgggcttggccatctccctggaccggccccac
actgtgctcacggtcatccaggccatccggagggaccccgaggcctgcgagaagctggga
gccacggtgctgcggctgcggcgagatcagaaagaggccttgctgcgcttctgtgtcacg
tggaacaccaactcgaggcactgccacgacgcgcaggctgtgctgggggtgctgctgcgg
cacgagcccccggaagagctcctggcctacccgggcgtgcaggcctccctggaggccctg
ctgccctacaccgagcggcatcttcagcggctcagccgggcgctgcaggcggccaccttc
ctggacttcttgtggcacaacatgaagctgcccgcgctccccgcggccccctctgtggcc
ccctcagctctctga
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