KEGG   Lutra lutra (Eurasian river otter): 125090596
Entry
125090596         CDS       T08100                                 
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03420  Nucleotide excision repair
llv03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    125090596
   03460 Fanconi anemia pathway
    125090596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:llv03032]
    125090596
   03400 DNA repair and recombination proteins [BR:llv03400]
    125090596
DNA replication proteins [BR:llv03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    125090596
DNA repair and recombination proteins [BR:llv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     125090596
SSDB
Motif
Pfam: ERCC4 HHH_5
Other DBs
NCBI-GeneID: 125090596
NCBI-ProteinID: XP_047569367
LinkDB
Position
18:11201024..11238667
AA seq 916 aa
MEPGLPARPTAMAPLLEYERQLVLELLDADGLVVCARGLGADRLLYHFLRLHCHPACLVL
VLNTQPAEEEYFINQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLT
DRIPSDLITGILVYRAHRIIESCQEAFILRLFRQKNKSGFIKAFTDNAVAFDTGFCHVER
VMRNLFVGKLYLWPRFHVAVNSFLEQHKPEVVEIHVSMTPAMLAIQTAILDILNACLKEL
KCHNPSLEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQ
YDCITFLNLLESLRATEKAFGQNSGWLFLDSSTSMFVNARARVYHLPDTKMNKKGKMSEK
TEIKEEQETKKELVLESNPKWEALTEVLKEIEAENKESEALGGPGQVLICASDDRTCSQL
REYITIGAEAFLLRLYRKTFEKDSKAEEMWMKFRREDSPKRMAKSNKRPKDPQNKQRAAT
KERTLKKKKRKLTLTQMMGKSDEPEEEGDVKEGGPRDIGSSPESSLEEIKHEEFDLNLSS
DAAYGILKDPLTILHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPG
KPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVPEGREGRDEANLDLVRGP
AAAGAAVDTRKAGGQEQNRTQQTIVVDVREFRSELPSLIHRRGIDIEPVTLEVGDYILTP
EMCVERKSISDLIGSLNNGRLYGQCISMARYYKRPLLLIEFDPGKPFSLTSRGALHQEIS
SNDISSKLTLLTLHFPRLRILWCPSPHATAELFEELKQNKPQPDAATAMAITADSEALPE
SEKYNPGPQDFLLKMPGVNAKNCRTLMQHVKNIAELASLSQDKLAGILGNAGNAKQLYDF
IHTSYAEVVSKGKMRK
NT seq 2751 nt   +upstreamnt  +downstreamnt
atggagccgggactgccggctcggccgacagctatggcgccactgctggagtatgagcgg
cagctggtgctggaactgctggacgcggacgggctggtagtgtgcgcccgcgggctcggc
gcggaccggctcctgtaccacttcctccggctgcactgccacccggcgtgcctggtgctg
gtgctcaacacccagccggccgaggaggagtacttcatcaatcagctgaagattgaagga
gttgagcacctccctcgccgcgtaacaaatgaaatcaccagtaacagtcgctatgaggtc
tacacacaaggaggggtgatatttgcaacaagtcgaatacttgtggtcgacttcttgacc
gatagaataccttcagatttaattaccggcatcttggtgtacagagctcacaggataatt
gagtcttgtcaagaagccttcatcttgcgcctgttccgccagaaaaacaagagtggcttt
attaaggccttcacagacaacgctgtcgccttcgatactggtttttgccacgtggaaaga
gtgatgaggaatctcttcgtagggaagctctacctgtggccaaggttccatgtagcagta
aactcgtttttagaacagcacaaacctgaagttgtagaaattcacgtttctatgacgcct
gccatgctcgccatacagaccgccatactggacattttaaacgcgtgtttgaaggagctc
aaatgccataacccgtccctcgaagtggaagatttgtctctagaaaatgctattggaaaa
ccctttgacaagacaatacgccattatctggaccctttgtggcaccagcttggagccaag
actaagtctttggttcaggacttgaagatattacgaactttgctgcagtatctctctcag
tatgattgtatcacattccttaaccttctggaatctctgagagccacagagaaggctttt
ggtcagaattcaggttggctctttcttgactccagcacctcgatgtttgtaaatgctcga
gcaagggtttaccatcttccagacaccaaaatgaacaaaaaaggcaaaatgtctgaaaaa
acagagattaaagaagaacaagaaacaaaaaaggaactggtgctagaaagcaaccccaag
tgggaagcattaaccgaagtactgaaagaaattgaggcagaaaataaggagagcgaagcc
cttggtggtccaggtcaagtactcatctgtgcaagcgacgaccgcacgtgttcccagctg
agagagtacatcactatcggagcagaggccttcttgctgaggctgtacaggaaaaccttc
gagaaggatagcaaagctgaagaaatgtggatgaaattccgacgtgaggacagcccgaag
agaatggcgaaatcgaacaaaaggcctaaagacccccaaaacaaacagagggctgccacc
aaagaaaggactctcaaaaagaaaaagcgaaagttaaccttaactcagatgatgggaaag
tctgacgaaccggaagaggaaggggatgtcaaggaaggcgggcctagagacataggcagt
agcccagaaagctccttagaagaaattaagcacgaggaatttgacttgaacttgtcctct
gacgccgcatatggaatcctgaaagacccactcaccatcctccatccgctcctgggctgt
agtgacccctacgctctgacaagggttctccatgaagtggagccaagatacgtggttctg
tacgatgccgagctcacgttcgttcgccagctcgagatttacagggcgagcaggcctggg
aagcctctgagggtctactttctgatatatggaggttcaaccgaggaacagcgctatctc
actgctttgcggaaagaaaaagaagcttttgagaaactcataagggagaaggccagcatg
gtggtccctgaagggagggaaggtagggacgaagcaaatctggacctggtaagaggcccc
gcggctgcaggcgctgccgtggacacccgtaaagcaggtggccaggaacagaacaggacg
cagcaaaccatagtcgtggatgtgcgggagttccgcagtgagctcccctccctgatccac
cgtcggggcatcgacattgaacccgtgacgctggaggtcggagactacattctgaccccg
gagatgtgcgtcgagcgcaagagcatcagcgacctgattggctcgttaaacaacggccgc
ctgtacggccagtgcatctccatggcccgctactacaagcgccccctgctgctgatcgag
tttgaccccgggaagcccttctccctcacctcccggggcgccctccatcaggagatctcc
agcaacgacatcagctccaaactcaccctcctcacgctccacttccccagactccggatt
ctctggtgcccctcgcctcacgccaccgccgagctattcgaggaactgaaacagaacaag
ccacagcccgatgcggccacagccatggccatcactgcggattcggaggcgctccccgag
tcagaaaagtataaccccggtccccaggacttcttattaaaaatgccaggggtgaacgcc
aaaaactgtcgcaccttgatgcagcacgtgaagaacattgcggaactggccagcctgtca
caggacaagctggcgggcattctgggcaatgccggcaacgccaagcagctctatgacttc
attcatacctcttacgcagaggtcgtgtccaagggaaaaatgagaaagtga

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