Lutra lutra (Eurasian river otter): 125090627
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Entry
125090627 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 10-like
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125090627
03036 Chromosome and associated proteins [BR:
llv03036
]
125090627
Membrane trafficking [BR:
llv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125090627
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
125090627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
ELH
DAM-like-phage1
Beta-prop_RIG_2nd
EutN_CcmL
DUF6059
Motif
Other DBs
NCBI-GeneID:
125090627
NCBI-ProteinID:
XP_047569435
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All DBs
Position
2:1765504..1841624
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AA seq
1334 aa
AA seq
DB search
MDQPEPPAPAPEDNVAKREFAGNEDDEGEQFDFDSGDEVPEADRQAAGAPPARNAGTDAP
SGSGGEVGMGTDTDAPSEPATLQAPARVNPYSVIDIAPFQDEQPLPLGADTEDDSGSQPV
PSGYSVPVPCGYAVPCSLPLLLPAYSSPVAVRAVTPHEEETQEAAEDSQFTSLRSEDPAS
SDDRAHKEDSALARWVADPANTAWMENPEEAIYDDVPRENSDSEPDEMVYDDVENGEEGG
NSSVECGWSSSEFESYEEQSDSEGKNGVPRSFLRSSHRKQLSHDLARFKEHYESKMRALM
ATAVGAAEIQQLKQRHERKMQKLMKAAREGTKDGLEKTKAAVKRGRSLIRTRSFMAADHR
SCLEEEQNLFIDVDCKHPEAVLTPMPEGLSQQQVVRRYILGSVVDSEKNYVGALKRILEQ
YEKPLSEMEPKMLSERKLRLVFYRVKELLQCHGMFQIALASRVAEWDSVETIGDVFVASF
SKSMVLDAYSEYVNNFSTAVAILKKTCATKPAFLEFLKQCQESSPDRVTLYSLMTKPIQR
FPQFILLLQDMLKNTSKGHPDRLPLQMALTELETLAEKLNERKRDADQRCEIKHVAKAIN
ERYLNKLLSSGNRYLVRSDDMIETVYNDRGEIVKTKERRVFLLSDVLMCATVSARTADSN
AIASPGRKYLLKWSVPLGHVDVVEYGSSDGTGENRCPPVHPPESLAVVTNAKPNQVYVGP
GQLYQDLQNLLHDLNVVGQISQLVGSLRGNYQNLNQSVAHDWTSGLQRLILKKEEEIRAA
DCCRIQLQLPGKQDKSGRPTFFTAVFNTFTPAIKESWLNSLQMAKLALEEENHMGWFCVE
DDGNQIKKERHPLLVGHMPVTVAKQQEFKIECAAYNPEPCANSEAQLDSLAAAHGFLWIG
SCTSQMGQIAIISFQNSTPKVIECFNVESRILCMVFVPTEERPVQPEAAARGAPGVPTVC
LGTEEGSISVYKSSQGSKKVRLQHFFTPDKSTVMSLACTPQSLYAGLVNGAVAVYTKAED
GSWNSDPQEVIQLGVLPVRSLVMAEDTLWAASGGLVFTIRTDTHTVENQLEAHQEEGMVV
AHMVIAGVGVWIAFTSGSTLRLFHTETLKHLQDVNIATPVHHMLPGHQRLSVTSLLVCHG
LLMVGTSLGIVVALPVPRLQGIPKVTGRGMVSYHAHNGPVKFLVMAAATVRTDKDKPTDS
PPPGAEAPEEEQKEAPPGEGPGPSQSCVDGIWLGGSLGSGTHRSDYSSSSGSLTASQGSG
SLEPRSEESVVYDLLRLPSVLPSRGRRARRAKASSVLVACGGQGHRRVSRKARQQRPEEL
AASVMVWQIPLLSA
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atggaccagccagagccgcctgcccctgctcctgaagacaacgtggcgaagcgcgagttc
gccggcaacgaggacgacgagggggagcaattcgatttcgacagcggagatgaggttccg
gaagcagaccgacaggctgcgggcgcccccccggccaggaacgcgggcacagacgccccc
tccggctcaggaggtgaggttgggatggggacagacacggacgccccgtcagaacccgcc
accctccaggccccggcgagagtcaacccctactccgtgatcgacatcgcgcccttccag
gatgagcagcccctgcccctgggtgcagacacggaggatgacagcgggagccagcctgtg
cccagcgggtactcggtgcctgtgccctgtggctacgccgtgccctgcagcctgccgctg
ctcctgcccgcctactccagccccgtcgccgtccgcgctgtgaccccgcacgaggaagaa
actcaggaagcagcagaagacagccagtttacttctttacgttctgaggatccagcaagc
agcgatgaccgggcgcacaaggaagacagtgccctcgcccggtgggttgcagacccagcc
aacaccgcgtggatggagaatccagaagaagccatttatgatgacgtgccaagagagaat
tcggactccgaaccagatgagatggtttatgacgacgtggagaacggagaggaaggcgga
aacagctctgtggagtgcggctggagctccagtgagttcgaaagctatgaggagcagagt
gactcagagggcaagaacggggtccccaggtccttcctgcgcagcagccacagaaagcaa
ctctcccatgacctagcccgtttcaaggagcactatgagagcaagatgagagctttgatg
gccaccgcggtgggggccgcagagattcagcagctaaagcagaggcacgaacggaagatg
cagaagctcatgaaggccgccagggagggcacgaaggatgggctggagaagacgaaggct
gctgtgaagagaggccgctccctcattcggaccaggtccttcatggctgcagatcacaga
tcctgtcttgaagaggagcagaatttatttattgatgttgactgcaaacatccagaagct
gtcctcacgcccatgcctgagggtctgtctcagcagcaggttgtgagaaggtacatcctg
ggctccgtggtcgacagcgagaagaactacgtcggcgccctgaagaggattctggagcaa
tacgagaagccactgtctgagatggagcccaagatgctgagcgagaggaagctgaggcta
gtgttctaccgcgtcaaggagctgctgcagtgccacggcatgttccagatcgcgctggcc
agccgcgtggccgagtgggactccgtggaaaccatcggggatgtcttcgtggcctcgttt
tccaagtccatggtgctggacgcctacagcgagtacgtgaataatttcagcaccgcggtg
gcaatcctcaagaaaacgtgtgctacgaagcctgcgttcctcgagttcttaaagcagtgc
caggagtccagccctgaccgcgtcacgctctacagtctgatgacgaagcccatacagagg
ttcccacagttcattctgctgctgcaggacatgctgaagaacacgtccaaaggccacccg
gaccggttgccccttcagatggcgctgaccgagctggaaaccttagcggagaagctgaac
gagaggaagagagacgccgaccagcgctgcgagatcaagcatgtcgccaaagccataaac
gagagatacctgaacaagcttctcagcagcgggaatcggtacctcgtgcggtcggatgac
atgatcgaaactgtgtacaacgacagaggagaaatcgtcaaaaccaaggagcgccgtgtc
ttcctgctgagtgatgtgttgatgtgtgccacggtcagtgcacgcactgcggacagcaac
gccatcgcgtcccctggccggaagtacttgttaaagtggagcgtccctctcggacacgtg
gacgtggtagagtatggcagcagcgatggtactggagaaaacaggtgtccccccgtgcac
cccccggagagcctggcggtggtcaccaacgccaagccgaaccaggtgtacgtggggcca
ggccagctctatcaagacttacagaatctgctgcatgacctgaacgtggtcgggcagatc
tcgcagctcgtcgggagcctccgagggaactaccagaacctgaaccagtccgtggcgcac
gactggacgtcggggttacagaggctcattctgaagaaggaggaggagatccgcgccgcg
gactgttgccgcatccagctgcagctcccggggaagcaggacaagtcggggcggcccacg
ttcttcacagcggtgttcaacaccttcacgcccgccatcaaagagtcttggctcaacagc
ttgcagatggccaagctcgccctggaggaggagaaccacatggggtggttctgtgtggaa
gatgatgggaatcagatcaagaaggaaagacaccctctcctcgtgggacacatgccagtg
acggtggccaagcagcaggagttcaagatcgagtgtgcggcgtacaacccggaaccctgc
gcgaacagcgaggctcagctcgattctctggccgcagcgcacggcttcctgtggatcgga
agctgcaccagccaaatgggccagatcgccatcatctcgtttcaaaactccacccccaag
gtcatcgagtgcttcaacgtggagtctcgaatcctgtgcatggtgtttgtccccacggag
gagcggcctgtgcagcccgaggccgcggcccggggggcgccgggtgtgcccaccgtctgc
ctggggactgaggaggggagcatctccgtgtacaagagcagccaaggctccaagaaggtg
cgtctgcagcatttcttcactccggacaagtccacggtcatgagcctcgcctgcactccc
cagagcctctacgctggcctggtcaatggcgccgtagccgtctacaccaaggcagaagat
ggatcctggaattccgaccctcaggaagtgatacaattaggcgtcctgccagttcggagc
ctcgtcatggcagaagacacgctctgggcggcttccggaggcctggtgttcacgatccgc
accgacacgcacacagtagagaaccagctggaggcccaccaggaggagggcatggtggtc
gctcacatggtcatcgctggcgtgggcgtctggatcgccttcacctctgggtccacgctt
cgcctcttccacacggagacgctcaagcacctgcaggacgtcaacatagccacccccgtt
caccacatgctgccagggcaccagcgcctgtcggtgaccagcctgctcgtctgccacggc
ttgctgatggttggcaccagcttgggcatcgtcgtggccttgcccgtcccacgtctgcag
ggcatccccaaggtgactggaagaggcatggtctcctaccacgcgcacaacgggcccgtc
aagttcctggtcatggccgctgccaccgtcaggacagacaaggacaagcccacggacagc
ccaccgcccggcgcggaggccccggaggaagagcagaaggaggcaccccctggcgagggg
cccgggccaagtcagagctgcgtggatggcatctggctggggggttcattgggctctggg
actcacagaagcgattactcctcatcgtccgggtccctgaccgcctcgcagggctccggc
tccctggagcccagatcggaggagagtgtggtctacgacctcctgcgtctccccagcgtc
ctgccgagccgggggcggcgggccaggagggcgaaagccagctcggtgctggtggcatgt
gggggccagggccaccggcgggtgagcaggaaggcccggcagcagcgcccagaggagctg
gccgcctccgtcatggtctggcagatccccctgctgagtgcctga
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