Lutra lutra (Eurasian river otter): 125090786
Help
Entry
125090786 CDS
T08100
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv05014
Amyotrophic lateral sclerosis
llv05017
Spinocerebellar ataxia
llv05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125090786
05017 Spinocerebellar ataxia
125090786
05022 Pathways of neurodegeneration - multiple diseases
125090786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125090786
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125090786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
125090786
NCBI-ProteinID:
XP_047569769
LinkDB
All DBs
Position
18:complement(22639918..22652764)
Genome browser
AA seq
1105 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLASTSAPAGPPAAASPCLG
PAAAAGSGLRRGAEGILAPQPPPQQQHQERPGATAIGSARGQSTGKGPPQSPVFEGVYNN
SRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIV
DTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDD
YDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLA
REIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGP
RGGVRCSSSRGGRPGLSSLPPRGPHHLDSSSPGPGSETRGINGGPSRMSPKAQRPLRGGA
KTLSSPSSRPSGEASVAPPPAAFPFLPVGRMYPPRSPKSAAPAPISASCPDAPMGSAVPT
SSASIPVTSSVVDPGVGSISPASPKISLAPTDVKELPAKEPGRTLESQELSRIAGKVPGL
QNEQKRFQLEELRKFGAQFKLQSSSSPETSLDPFPPRILKEEAKGKEKEVDGLLTSEPVG
SPVSSKTESVSDKEDKPALPLAGGTEGPEQPPPPCPSQTGSPPVGLVKGDDKDEGPVAEQ
VKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISY
IPQIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAA
AGPPLVAATPYSSYIPYTPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQA
IVSSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSP
VQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQ
LPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPA
LSASTPSPYPYIGHPQGEQPGQAPGFPGGADDRILCRVGRSHSRRRQGLAPGSVLCFPPS
SLSCDPAAPLPTASPALSDPDCLLT
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgccggcctcccgggggcactagccctcccaacggcggcctcccgggg
cccctggcctccacctcggctcccgcagggcctcccgcggccgcttctccctgcctgggg
cctgcagccgccgccgggagtgggctccgtcggggagccgagggcatcttggcgccgcag
cccccgccgcagcaacagcatcaggagaggccgggggcaacggctatcggcagcgccagg
ggacagagcacaggaaagggacccccacagtcaccggtgtttgagggtgtctacaacaat
tccagaatgctgcattttcttacagctgttgtgggctccacctgtgatgtaaaggtgaag
aatggtaccacctatgaaggtatcttcaagactctgagctcaaagtttgaattagcagta
gacgctgtacaccggaaagcatctgagccagcaggtggccctcgtcgggaagacattgtg
gacaccatggtgtttaagccaagcgatgtcatgcttgtccacttccgaaatgttgacttc
aattatgctactaaagataaattcactgattcagccattgccatgaactcgaaggtgaat
ggggaacacaaagagaaggtgcttcagcgttgggaagggggtgacagcaacagcgatgac
tatgacctggagtctgacatgtccaatggatgggaccccaacgaaatgttcaagttcaac
gaggagaactatggtgtgaagaccacctatgacagcagtctttcttcttacacggtgccc
ttggagaaggacaactcagaagagtttcgtcagcgggagctgcgtgcagcccagttggct
cgggagattgaatcgagcccccagtatcgcctgcggatcgccatggagaatgatgatggg
cggacagaggaggagaagcacagtgcagtccagcggcagggttcaggacgggagagcccc
agcttggcatctagggagggaaagtacatccctttaccccagcgagttcgggaaggtccc
cggggaggagttcgatgcagtagttcccggggtggccggcctggccttagctctttgcca
cctcgtggccctcaccaccttgacagtagcagccccggcccgggttctgagacacgtggt
atcaatggaggcccttcccgcatgtcccctaaggcacagcggcccctgagaggtggtgcc
aagactctgtcttcacccagcagtaggccctctggagaagcttctgttgcacctcctcct
gcagctttcccttttcttccagtgggccggatgtaccccccgcgctctcccaagtcggct
gctcctgccccaatctcagcttcctgtcctgatgcccccatgggctcggcagtaccgacc
tcttcagcttccatccctgtgacatcatcggttgtggatcctggagtaggctccatttcc
cctgcttctccaaagatctcattggcccccacagatgtaaaagaacttccagccaaggaa
cctgggagaactctggagtcccaggagctgtcccggatagctgggaaagttcctggcctt
cagaatgaacagaaacgctttcaactggaagaactgaggaaatttggggcccagtttaag
ctgcagtccagtagctcccctgagaccagcctggatccttttcctccccggattttaaag
gaggaggccaaaggaaaagagaaggaggttgatggtctattgacttcagagccagtgggg
tccccagtctcctcgaagacagagtccgtatcagataaggaggacaagccagcactgcca
ctggcgggaggcacggagggcccagagcagcccccaccaccttgcccaagccaaactggc
agccccccggtgggcctcgtcaagggagatgacaaggatgagggcccagtcgctgaacaa
gtgaagaagtcaacactgaaccccaatgccaaggaattcaatcccacaaagcctctgctg
tctgtgaataaatccaccagtacccccacttctccggggccccggactcattctactccc
tccatcccggtgctgacagcaggccagagtgggctctacagcccccagtacatttcctac
atacctcagatccacatgggaccagctgttcaggcccctcagatgtatccgtaccctgta
tccaattctgtgcctggacagcagggcaaataccggggagcaaaaggctccctgcccccg
cagcgctcggaccagcaccagccagcctcagcccctccgatgatgcaggccgctgccgcg
gccggcccacctctggtggctgccacaccgtactcttcctacatcccttacaccccgcag
cagttcccaggccagcccgccatgatgcagcccatggcccactacccctcacagccggtg
tttgcccccatgcttcagagcaacccacgcatgctgacgtcggggagccatccccaggcc
atcgtgtcgtcctccacccctcagtacccttctgcagagcaacccaccccccaagccctc
tatgccactgttcaccagtcctatccacaccatgccacgcagctccatgcccaccagccg
cagccggccaccacgcctactgggagccagccgcagtcccagcatgcggcccccagtccc
gtccagcaccaggcggggcaggccccacacctgggcagtggacagccacagcagaatctg
taccacccaggggccctgacaggcacaccgccttctctgccaccgggaccttctgcccag
tcccctcagagcagcttcccccagccagccgctgtgtatgccatccatgcccaccagcag
ctgccccacggcttcaccaacatggcccatgttacccaggcccatgtccaaactggaatc
acagcagccccgccccctcaccctggggctccccacccgccccaggtgatgctgctgcac
ccaccccagagccatgggggccccccccaaggcgcggtgccccagagtggggtgcctgca
ctctcagcttccacaccctcaccctacccctacatcggacacccccaaggtgagcagcct
ggccaggcgcctggatttccaggaggagccgatgacaggattctatgtagggtgggcaga
agccacagtcgccgccgccaggggcttgctcctggctctgtcctttgcttccctccgtcc
tcgctcagttgtgatccagcagcccccctccccactgcctccccagctctcagtgacccc
gactgtctcctgacttag
DBGET
integrated database retrieval system